Nucleotide Global Alignment
Description
- Query:
- TRCN0000470806
- Subject:
- XR_002956291.1
- Aligned Length:
- 3395
- Identities:
- 840
- Gaps:
- 2554
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTCGCTCCGGAGGAGGCGTGAATCGCGCAGGGATTGACTAATTTGGGGTGGGGGGTGCGGTGGGCGATGGAGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCCTGAGGACATGGCGTCGCTGAGCGAGTTCGACTCCTTGGCGGGCAGCATCCCGGCCACCAAGGTGGAGATC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACCGTGTCCTGCAGGAACCTCCTGGACAAAGACATGTTTTCCAAGTCCGACCCACTGTGCGTCATGTATACCCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGGGATGGAGAACAAGCAGTGGCGGGAGTTTGGGCGCACCGAAGTCATCGACAACACGCTCAATCCTGACTTCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGCGCAAGTTCATTGTGGATTACTTTTTCGAGGAGAAGCAGAACCTCCGTTTTGATCTATACGACGTTGACTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGAGTCCTGATTTATCCAAACACGATTTCCTGGGCCAGGCCTTCTGCACCCTTGGAGAGATTGTGGGGTCCCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGGGAGCCGCCTGGAAAAGCCCCTCACGATAGGCGCATTCAGCCTGAATTCCAGGACGGGCAAACCCATGCCAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTGTGTCCAACGGAAGTGGTCTTTGGATGGAAAGTTTGAGAACCACTGGTCTGGAAGCCTCCGGTGGTGTCCCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGAAAGAAATGTGGCACCATCATCCTGTCCGCTGAGGAGCTCAGCAACTGTAGGGATGTCGCCACCATGCAGTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTGTGCCAACAAGCTGGACAAGAAAGATTTCTTTGGGAAATCTGACCCCTTCTTGGTATTCTACAGAAGCAACG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGGATGGAACGTTCACCATTTGCCACAAGACCGAGGTCATGAAGAACACCCTAAATCCAGTCTGGCAAACTTTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCCATTCCCGTGAGAGCCCTCTGCAACGGCGACTACGATCGGACCATCAAGGTGGAGGTGTACGACTGGGATCG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGACGGCAGCCATGACTTCATTGGGGAGTTCACCACCAGTTACCGGGAGCTGGCCCGTGGGCAGAGCCAATTCA 962
Query 1 --------------------------------ATGAAGAAAAAGAAATACGTGAATTCTGGCACAGTCACCCTG 42
|||||||||||||||||||||||||||||||||
Sbjct 963 ACATCTATGAGGTGGTAAACCCGAAAAAGAAAATGAAGAAAAAGAAATACGTGAATTCTGGCACA--------- 1027
Query 43 CTTTCCTTTGCTGTGGAGTCAGAGTGCACCTTCCTTGACTACATCAAAGGAGGGACCCAGATCAACTTCACTGT 116
|||||||||||||||||||||
Sbjct 1028 -----------------------------------------------------GACCCAGATCAACTTCACTGT 1048
Query 117 GGCCATTGATTTCACTGCCTCCAATGGGAACCCCTCACAGTCCACATCCCTGCACTACATGAGCCCCTACCAGC 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1049 GGCCATTGATTTCACTGCCTCCAATGGGAACCCCTCACAGTCCACATCCCTGCACTACATGAGCCCCTACCAGC 1122
Query 191 TGAACGCCTACGCGCTGGCGCTGACTGCCGTCGGAGAGATCATCCAGCACTACGACAGTGACAAGATGTTCCCT 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1123 TGAACGCCTACGCGCTGGCGCTGACTGCCGTCGGAGAGATCATCCAGCACTACGACAGTGACAAGATGTTCCCT 1196
Query 265 GCCCTGGGCTTCGGGGCCAAGCTGCCCCCGGATGGCAGAGTGTCCCACGAGTTCCCACTGAATGGCAACCAGGA 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1197 GCCCTGGGCTTCGGGGCCAAGCTGCCCCCGGATGGCAGAGTGTCCCACGAGTTCCCACTGAATGGCAACCAGGA 1270
Query 339 GAACCCCTCATGCTGCGGCATCGACGGCATCCTGGAGGCCTACCACCGCAGCCTGCGCACTGTGCAGCTGTACG 412
|||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1271 GAACCCCTCATGCTGTGGCATCGACGGCATCCTGGAGGCCTACCACCGCAGCCTGCGCACTGTGCAGCTGTACG 1344
Query 413 GCCCCACCAACTTTGCCCCCGTGGTCACCCACGTGGCCAGGAATGCAGCGGCCGTGCAGGATGGCTCCCAGTAC 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1345 GCCCCACCAACTTTGCCCCCGTGGTCACCCACGTGGCCAGGAATGCAGCGGCCGTGCAGGATGGCTCCCAGTAC 1418
Query 487 TCGGTGCTGCTCATCATTACTGATGGGGTCATCTCGGACATGGCGCAGACCAAGGAGGCCATTGTCAACGCTGC 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1419 TCGGTGCTGCTCATCATTACTGATGGGGTCATCTCGGACATGGCGCAGACCAAGGAGGCCATTGTCAACGCTGC 1492
Query 561 CAAGCTCCCCATGTCCATCATTATCGTCGGCGTGGGCCAGGCAGAGTTCGACGCCATGGTGGAGCTGGATGGCG 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1493 CAAGCTCCCCATGTCCATCATTATCGTCGGCGTGGGCCAGGCAGAGTTCGACGCCATGGTGGAGCTGGATGGCG 1566
Query 635 ACGACGTGCGGATCTCCTCCCGGGGGAAGCTGGCTGAACGCGACATCGTCCAGTTTGTACCCTTCCGGGACTAC 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1567 ACGACGTGCGGATCTCCTCCCGGGGGAAGCTGGCTGAACGCGACATCGTCCAGTTTGTACCCTTCCGGGACTAC 1640
Query 709 GTGGACCGCACAGGCAACCACGTGCTGAGCATGGCCCGCCTGGCCCGAGACGTGCTGGCAGAGATCCCTGACCA 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1641 GTGGACCGCACAGGCAACCACGTGCTGAGCATGGCCCGCCTGGCCCGAGACGTGCTGGCAGAGATCCCTGACCA 1714
Query 783 ACTGGTGTCCTACATGAAGGCACAGGGCATTCGCCCGCGTCCCCCACCCGCAGCACCAACCCACTCGCCCTCGC 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1715 ACTGGTGTCCTACATGAAGGCACAGGGCATTCGCCCGCGTCCCCCACCCGCAGCACCAACCCACTCGCCCTCGC 1788
Query 857 AGTCCCCAGCCCGCACGCCCCCTGCGTCCCCCCTGCACACGCACATC--------------------------- 903
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1789 AGTCCCCAGCCCGCACGCCCCCTGCGTCCCCCCTGCACACGCACATCTGAACCTGGTCTCAGCAGGCAGGTGGC 1862
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1863 TGGGGCCTGGGAGAGGCCAGGTGAATGGGAGGCCAGGGCCCCAGACTCCCCGAAGTTGGCCTGCCCGGCCTTTG 1936
Query 904 -------------------------------------------------------------------------- 903
Sbjct 1937 GGACATCTGTGTGCCTGGGAGGCTGCCAGGGGGTGGGGCTTCTGAAGACCCCTCCTCAATTTCTTGGCCTCACT 2010
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2011 TATTGCCCAAACCCAGGGAGTTAGGGGGGTACGGGTGAAAGAGGGGTACACAGGGACCCAGCCCTTCTCTTCTT 2084
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2085 CCCCAATACCTGGCTCTAACCCAGCCAGGAAGGTGTAAACAATAAGGGTGATTGGGGTCCCTGTCGCCCACCCC 2158
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2159 CGGCAATCCTATTTGCTTACCTGTCACCCTGAAGCCTGGGCTTGGCCTCCTCCAGCCCCCCATCTCCGTCCCAT 2232
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2233 CCTCCCATGGTGTCTACTCCTGTCCCTGAGCCCCGCCCTGTGGTCTATCCTGTGCCCGATTTCCAGTGAACCCC 2306
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2307 ATGAAGCTGATGGGTTTGCAGGAAGGCCTGAACATGTGCACCCTCCCAGGGACACTGGATGCGCTGGGAGCCCC 2380
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2381 GGGGACCCCATGGGGTGCTGTAATCATGGACCGTAGGCCATGTGATGGGCCTGAAGTGGAGGCTGCTCAGCACA 2454
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2455 GAGCCCTTTCTGGTGCCTCTCGAACTCAGTACGATGCAAGTTCTAGACACACAGATGGCCTGTGGAGGCCTCTC 2528
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2529 CCTGGTGTGGGCCCACAGGTACTTCCATGGTTGACTCCTGGCTTCAGGAATCCCTTCCTCCCTCCAGAGGCTTC 2602
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2603 CCAGGGCCCTCGGTGCCCACGCCTCTGCCCATCTGGAGGCCTGAGTAAGGAGTGGCTCAGCCCCACGTTCCCAC 2676
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2677 ACTGCTCCTGCTCTTTGCCCTGTATCCCATGAGGCTAGGAGACAGGAGTCCTGGGTTTGAGCCCTGCCTCCCCC 2750
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2751 CACTGCCTAATGTGGGAACCCAAGCAAGGCCCTTCTACCTTTTGGGCCTCAGTTTCCATGTCTGTACCACAAGA 2824
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2825 GGGTTGACCAGATGGCCCCAGGTTTTCCTTTAGGTCTGACATCCTGAGGGTCATTCATCCCATGCCCAGTTCCC 2898
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2899 CCCATCCTACTCCTAACAGATGTGACCCTACTTGAGGCCGCCTTGGCTTTTGGGTCACCCTGTCTCATCCCATC 2972
Query 904 -------------------------------------------------------------------------- 903
Sbjct 2973 ACCCCAAACATACCCTAGTCCTTCAGCCTGGGGCTCTGGCATCTGAGCCCGAGCTCCTGCCCCTGCTGTGGGAA 3046
Query 904 -------------------------------------------------------------------------- 903
Sbjct 3047 AGGTGGGGAAGAAGGGGATCTCCCTCCCGGGCCCACCCAGCTGCCCAGCCTTTGCCCACTCGGGGAGCAGATCA 3120
Query 904 -------------------------------------------------------------------------- 903
Sbjct 3121 TGCATGCCAATCCCTGTTGCCGCATGGAGCTCCTCAGCCCACTGACCTCTCCGTGCCTGGTGCAGGCCAGGCCC 3194
Query 904 -------------------------------------------------------------------------- 903
Sbjct 3195 CCGTCTTCCGCCTGCCTCTGCTTCCCCGTCATGCATGGTGGTGGTGTTTCTACGGTGTCTGGTTCTGTGCCCGT 3268
Query 904 ----------------------------------------------------------------- 903
Sbjct 3269 CTCTGAGACAGTCTCTGTGTGGAATTTGCCTTAAACTGAAGTAAATTTGGTTCTTTTAGTAAAGC 3333
