Nucleotide Global Alignment

Description

Query:
TRCN0000470813
Subject:
XM_006538322.3
Aligned Length:
1062
Identities:
547
Gaps:
451

Alignment

Query    1  ATGGGACCAGTCTCTCTTCTTCCAAAATATCAGAAGTTAAACACTTGGAACGGAGATTTGGCCAAGATGACCCA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TTTACAGGCTGGACTCAGTCCAGAGACTATAGAGAAAGCTCGCCTGGAACTGAATGAAAACCCCGATGTTTTAC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ATCAGGATATTCAGCAAGTCAGGGACATGATCATCACCAGGCCTGACATTGGATTTTTACGTACAGATGATGCC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TTCATCCTGAGATTTCTCCGAGCCAGGAAGTTTCACCAAGCGGATGCCTTTAGACTCCTGGCTCAGTATTTCCA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GTACCGCCAGCTAAACCTGGACATGTTCAAAAACTTCAAGGCAGATGATCCCGGCATTAAGAGGGCTCTGATCG  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  ATGGGTTCCCCGGGGTGCTGGAAAACCGAGACCATTACGGCAGGAAGATTCTTTTGCTGTTTGCAGCCAATTGG  444
                                                                                 ||   
Sbjct    1  ---------------------------------------------------------------------AT---  2

Query  445  GATCAGAGTAGGAACTCCTTCACAGACATCCTTCGTGCCATCCTGCTGTCATTGGAAGTCCTAATCGAAGATCC  518
            |||        ||||||||||||.||||||||.||||||||.||.|||||.|||||||||||.||.||||||||
Sbjct    3  GAT--------GAACTCCTTCACGGACATCCTCCGTGCCATTCTCCTGTCCTTGGAAGTCCTTATTGAAGATCC  68

Query  519  GGAGCTTCAGATAAATGGCTTCATTTTAATTATAGACTGGAGTAATTTTTCCTTCAAACAAGCCTCCAAACTGA  592
            .|||||.||||||||.||.|||||||||||||||||||||||.||.|||||||||||.|||||.|||||.||||
Sbjct   69  CGAGCTCCAGATAAACGGTTTCATTTTAATTATAGACTGGAGCAACTTTTCCTTCAAGCAAGCATCCAAGCTGA  142

Query  593  CACCTTCAATCCTTAAACTGGCCATTGAAGGGTTGCAGGACAGCTTTCCTGCCCGCTTTGGAGGAGTCCACTTT  666
            ||||.||.|||||.||||||||||||||||||.|||||||||||||||||||.|||||||||||.|||||.|||
Sbjct  143  CACCCTCTATCCTGAAACTGGCCATTGAAGGGCTGCAGGACAGCTTTCCTGCTCGCTTTGGAGGCGTCCATTTT  216

Query  667  GTCAACCAGCCCTGGTACATTCATGCCCTCTACACACTCATCAAGCCATTTCTTAAAGACAAGACCAGGAAACG  740
            ||||||||||||||||||||.||.|||||.||||||||||||||||||||.|||||.||||||||.||.|||||
Sbjct  217  GTCAACCAGCCCTGGTACATCCACGCCCTGTACACACTCATCAAGCCATTCCTTAAGGACAAGACAAGAAAACG  290

Query  741  GATTTTCCTGCATGGAAACAATTTAAACAGCCTTCACCAGCTAATACACCCTGAATTTTTGCCCTCTGAATTTG  814
            |||||||||.||||||||||||||||||||.||||||||||||||||||||.||.||..|||||||||||||||
Sbjct  291  GATTTTCCTACATGGAAACAATTTAAACAGTCTTCACCAGCTAATACACCCCGAGTTCCTGCCCTCTGAATTTG  364

Query  815  GAGGAACTCTTCCTCCTTATGACATGGGAACTTGGGCCCGGACGTTACTCGGTCCCGACTACAGCGATGAAAAT  888
            |||||||.|||||||||||.||||||||.||||||||||||||.|||||.||.||.||||||||||||||||||
Sbjct  365  GAGGAACCCTTCCTCCTTACGACATGGGGACTTGGGCCCGGACATTACTTGGCCCTGACTACAGCGATGAAAAT  438

Query  889  GACTATACTCACACATCCTATAATGCAATGCACGTGAAGCATACGTCCTCGAATCTGGAGAGAGAATGCTCACC  962
            ||||||||.||.||.|||||.|||||.|||||.|||||.||.||.|..||.||.|||||||||||.||||||||
Sbjct  439  GACTATACCCATACTTCCTACAATGCCATGCATGTGAAACACACCTGTTCCAACCTGGAGAGAGAGTGCTCACC  512

Query  963  CAAGCTGATGAAAAGATCTCAGTCTGTGGTAGAAGCTGGGACCCTGAAACATGAGGAGAAGGGAGAGAATGAGA  1036
            |||||..||||||||||||||||||||||||||||||||||||.||||||||||.|||||.|||||.|||||||
Sbjct  513  CAAGCCCATGAAAAGATCTCAGTCTGTGGTAGAAGCTGGGACCTTGAAACATGAAGAGAAAGGAGAAAATGAGA  586

Query 1037  ACACCCAGCCACTCCTGG-TCTGGAC  1061
            |||||||||||||.|||| |||||||
Sbjct  587  ACACCCAGCCACTGCTGGCTCTGGAC  612