Nucleotide Global Alignment

Description

• Query: TRCN0000470842
• Subject: NM_001144909.2
• Aligned Length: 1275
• Identities: 840
• Gaps: 351

Alignment

Query    1  ATGGCCTCAGCCTGCCCAGGCTCTGATTTCACGTCTATCCATTCAGAGGAGGAACAGCTGAGAGGCCT--TGGA  72
            |||     ||             |||.|.||.|  .|.|||   || ||.|.|.||||||   |||||  ||||
Sbjct    1  ATG-----AG-------------TGACTCCAAG--GAACCA---AG-GGTGCAGCAGCTG---GGCCTCCTGGA  47

Query   73  --------------------------------TTCCGACAGAC-------TCGAG--GAT--------ACAAGA  97
                                            ||||.|.||||       ||.||  |||        ||||||
Sbjct   48  AGAAGATCCAACAACCAGTGGCATCAGACTTTTTCCAAGAGACTTTCAATTCCAGCAGATACATGGCCACAAGA  121

Query   98  G-------------CTTAGC------------------------------------------------------  104
            |             |||.||                                                      
Sbjct  122  GCTCTACAGGGTGTCTTGGCCATGGCGCCCTGGTGCTGCAACTCCTCTCCTTCATGCTCTTGGCTGGGGTCCTG  195

Query  105  -----------------AGTGTCCAAGGTCCCCAGCTCCATAAGTCAGGAACAATCCAGGCAAGACGCGATCTA  161
                             ||||||||||||||||||||||.|||||||||||||||||..|||||||||.|||||
Sbjct  196  GTGGCCATCCTTGTCCAAGTGTCCAAGGTCCCCAGCTCCCTAAGTCAGGAACAATCCGAGCAAGACGCAATCTA  269

Query  162  CCAGAACCTGACCCAGCTTAAAGCTGCAGTGGGTGAGCTCTCAGAGAAATCCAAGCTGCAGGAGATCTACCAGG  235
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  270  CCAGAACCTGACCCAGCTTAAAGCTGCAGTGGGTGAGCTCTCAGAGAAATCCAAGCTGCAGGAGATCTACCAGG  343

Query  236  AGCTGACCCAGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCTGCAGGAGATCTACCAGGAGCTG  309
            ||||||||||||||||||||||||||||||||.|.|||||||||||.|||||||||||||||||||||||||||
Sbjct  344  AGCTGACCCAGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCAGGAGATCTACCAGGAGCTG  417

Query  310  ACCCGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCTGCAGGAGATCTACCAGGAGCTGACCTG  383
            |||||||||||||||||||||||||||.|.|||||||||||.||||||||||||||||||||||||||||||  
Sbjct  418  ACCCGGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCAGGAGATCTACCAGGAGCTGACC--  489

Query  384  GCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGATGCAGGAGATCTACCAGGAGCTGACTCGGCTGA  457
                                                                               |||||||
Sbjct  490  -------------------------------------------------------------------CGGCTGA  496

Query  458  AGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCAGCAGGAGATCTACCAGGAGCTGACCCGGCTGAAGGCT  531
            |||||||||||||||||.|.|||||||||||.||||.||||||||||||||||||||||||||.||||||||||
Sbjct  497  AGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCAGGAGATCTACCAGGAGCTGACCCAGCTGAAGGCT  570

Query  532  GCAGTGGGTGAGCTTCCAGAGAAATCTAAGCAGCAGGAGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGT  605
            ||||||||||||.|.||||                        |||||                          
Sbjct  571  GCAGTGGGTGAGTTGCCAG------------------------ACCAG--------------------------  594

Query  606  GGGTGAGCTTCCAGAGAAATCTAAGCAGCAGGAGATCTACCAGGAGCTGACCCAGCTGAAGGCTGCAGTGGAAC  679
                               ||.|||||||||.|.|||||.||.||.||||||.|..|||||.|||||.|.||||
Sbjct  595  -------------------TCCAAGCAGCAGCAAATCTATCAAGAACTGACCGATTTGAAGACTGCATTTGAAC  649

Query  680  GCCTGTGCCACCCCTGTCCCTGGGAATGGACATTCTTCCAAGGAAACTGTTACTTCATGTCTAACTCCCAGCGG  753
            |||||||||.||.|||||||..|||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  650  GCCTGTGCCGCCACTGTCCCAAGGACTGGACATTCTTCCAAGGAAACTGTTACTTCATGTCTAACTCCCAGCGG  723

Query  754  AACTGGCACGACTCCATCACCGCCTGCAAAGAAGTGGGGGCCCAGCTCGTCGTAATCAAAAGTGCTGAGGAGCA  827
            |||||||||||||||.|||||||||||.|.||||||.||||||||||||||||||||||||.||||||||||||
Sbjct  724  AACTGGCACGACTCCGTCACCGCCTGCCAGGAAGTGAGGGCCCAGCTCGTCGTAATCAAAACTGCTGAGGAGCA  797

Query  828  GAACTTCCTACAGCTGCAGTCTTCCAGAAGTAACCGCTTCACCTGGATGGGACTTTCAGATCTAAATCAGGAAG  901
            |||||||||||||||||||.|||||||.||||||||||||.|||||||||||||||||||.|||||||||||||
Sbjct  798  GAACTTCCTACAGCTGCAGACTTCCAGGAGTAACCGCTTCTCCTGGATGGGACTTTCAGACCTAAATCAGGAAG  871

Query  902  GCACGTGGCAATGGGTGGACGGCTCACCTCTGTTGCCCAGCTTCAAGCAGTATTGGAACAGAGGAGAGCCCAAC  975
            |||||||||||||||||||||||||||||||||..|||||||||.|||.|||.||||||||.|||||.||||||
Sbjct  872  GCACGTGGCAATGGGTGGACGGCTCACCTCTGTCACCCAGCTTCCAGCGGTACTGGAACAGTGGAGAACCCAAC  945

Query  976  AACGTTGGGGAGGAAGACTGCGCGGAATTTAGTGGCAATGGCTGGAACGACGACAAATGTAATCTTGCCAAATT  1049
            ||....|||.|.||||||||.||||||||||||||||.|||||||||||||.|...||||.|..|||.|||.|.
Sbjct  946  AATAGCGGGAATGAAGACTGTGCGGAATTTAGTGGCAGTGGCTGGAACGACAATCGATGTGACGTTGACAATTA  1019

Query 1050  CTGGATCTGCAAAAAGTCCGCAGCCTCCTGCTCCAGGGATGAAGAACAGTTTCTTTCTCCAGCCCCTGCCACCC  1123
            ||||||||||||||||.||||||   ||||||.|||.||.|||                               
Sbjct 1020  CTGGATCTGCAAAAAGCCCGCAG---CCTGCTTCAGAGACGAA-------------------------------  1059

Query 1124  CAAACCCCCCTCCTGCG  1140
                             
Sbjct 1060  -----------------  1059