Nucleotide Global Alignment
Description
- Query:
- TRCN0000470842
- Subject:
- NR_026709.2
- Aligned Length:
- 2247
- Identities:
- 902
- Gaps:
- 1241
Alignment
Query 1 -----ATGGCCTCAG--------CCTGCCCAGGCTCTGATTTCACGTCTATCCATTCAGAGGAGGAACAGCTGA 61
.|||...||| |.|| || |||.|.||.| .|.||| || ||.|.|.||||||
Sbjct 1 AACATCTGGGGACAGCGGGAAAACATG---AG----TGACTCCAAG--GAACCA---AG-GGTGCAGCAGCTG- 60
Query 62 GAGGCCT--TGGA--------------------------------TTCCGACAGAC-------TCGAG--GAT- 91
||||| |||| ||||.|.|||| ||.|| |||
Sbjct 61 --GGCCTCCTGGAAGAAGATCCAACAACCAGTGGCATCAGACTTTTTCCAAGAGACTTTCAATTCCAGCAGATA 132
Query 92 -------ACAAGAGCT-TA--------------------GCAGTGTCCAAGGTCCCCAGCTCCATAAGTCAGGA 137
||||||||| || .|||||||||||||||||||||||.||||||||||
Sbjct 133 CATGGCCACAAGAGCTCTACAGTTCCTTTTCTTCTTGGCCCAGTGTCCAAGGTCCCCAGCTCCCTAAGTCAGGA 206
Query 138 ACAATCCAGGCAAGACGCGATCTACCAGAACCTGACCCAGCTTAAAGCTGCAGTGGGTGAGCTCTCAGAGAAAT 211
|||||||..|||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 207 ACAATCCGAGCAAGACGCAATCTACCAGAACCTGACCCAGCTTAAAGCTGCAGTGGGTGAGCTCTCAGAGAAAT 280
Query 212 CCAAGCTGCAGGAGATCTACCAGGAGCTGACCCAGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAG 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|.|||||||||||.|||
Sbjct 281 CCAAGCTGCAGGAGATCTACCAGGAGCTGACCCAGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAG 354
Query 286 CTGCAGGAGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCTGCA 359
|||||||||||||||||||||||||||||||||||||||||||||||||||.|.|||||||||||.||||||||
Sbjct 355 CTGCAGGAGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCA 428
Query 360 GGAGATCTACCAGGAGCTGACCTGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGATGCAGGAGA 433
||||||||||||||||||||||.|||||||||||||||||||||||.|.|||||||||||.|||.|||||||||
Sbjct 429 GGAGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCAGGAGA 502
Query 434 TCTACCAGGAGCTGACTCGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCAGCAGGAGATCTAC 507
||||||||||||||||.||||||||||||||||||||||||.|.|||||||||||.||||.|||||||||||||
Sbjct 503 TCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCAGGAGATCTAC 576
Query 508 CAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCAGCAGGAGATCTACCAGGA 581
|||||||||||...||||||||||||||||||||||.|.|||||||||||.||||.||||||||||||||||||
Sbjct 577 CAGGAGCTGACGGAGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCAGGAGATCTACCAGGA 650
Query 582 GCTGACCCGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCAGCAGGAGATCTA----------- 644
||||||||.||||||||||||||||||||||.|.|||||..|.||.|||||||||.|.|||||
Sbjct 651 GCTGACCCAGCTGAAGGCTGCAGTGGGTGAGTTGCCAGACCAGTCCAAGCAGCAGCAAATCTATCAAGAACTGA 724
Query 645 -------------------------------------------------------------------------- 644
Sbjct 725 CCGATTTGAAGACTGCATTTGGTGAGTTCCTGCACATCAAGGGTCCTTGGGCCTGAGATGGTCTCTGTGTGATG 798
Query 645 -------------------------------------------------------------------------- 644
Sbjct 799 TGACTTTACTTGAGTTACCAACCCTGCCTGAGCCTCAGTTTCCTCCCCTGTGAAATGAGAACACGGGGTAACTG 872
Query 645 -----------------------------CCAGG---------------------------------------- 649
|||||
Sbjct 873 CGATCATTGCACTTGGTGTTCACAGTGGGCCAGGCACACAGTAGACACTCAGTTCAACCAATCCGCTGCCTTCT 946
Query 650 --------------AGCTG------------------------------------------------------- 654
|||||
Sbjct 947 GTTCTGAGCTCTAAAGCTGCTAATTCTCCCAGTCTGGAAGAGATGGAGCCAGGACTCCTGGGTTCTCCTGGGGA 1020
Query 655 ----------------------------------------------------------ACCCAGC--------- 661
|||||.|
Sbjct 1021 TCAGGGAGAGTCTTGGGAAGTAGGGAGAGGAATGGTCTCTCCCCATTCCAAGCGGTCCACCCAACATGGACAGT 1094
Query 662 ----------------------------TGAAGGCT--GCAG---TG--------------------------- 675
|||||||| |||| ||
Sbjct 1095 CAAGGAAGGGCCCTGATTTTCAAGGGCTTGAAGGCTGGGCAGATATGGGAATATGGACAACCTAATCTGAGCCC 1168
Query 676 ------------------------GAACGCCTGTGCCACCCCTGTCCCTGGGAATGGACATTCTTCCAAGGAAA 725
|||||||||||||.||.|||||||..|||.||||||||||||||||||||
Sbjct 1169 AGCCCTGACCAGCCTCCCCCAACAGAACGCCTGTGCCGCCACTGTCCCAAGGACTGGACATTCTTCCAAGGAAA 1242
Query 726 CTGTTACTTCATGTCTAACTCCCAGCGGAACTGGCACGACTCCATCACCGCCTGCAAAGAAGTGGGGGCCCAGC 799
|||||||||||||||||||||||||||||||||||||||||||.|||||||||||.|.||||||.|||||||||
Sbjct 1243 CTGTTACTTCATGTCTAACTCCCAGCGGAACTGGCACGACTCCGTCACCGCCTGCCAGGAAGTGAGGGCCCAGC 1316
Query 800 TCGTCGTAATCAAAAGTGCTGAGGAGCAGAACTTCCTACAGCTGCAGTCTTCCAGAAGTAACCGCTTCACCTGG 873
|||||||||||||||.||||||||||
Sbjct 1317 TCGTCGTAATCAAAACTGCTGAGGAG------------------------------------------------ 1342
Query 874 ATGGGACTTTCAGATCTAAATCAGGAAGGCACGTGGCAATGGGTGGACGGCTCACCTCTGTTGCCCAGCTTCAA 947
|||||||.|
Sbjct 1343 -----------------------------------------------------------------CAGCTTCCA 1351
Query 948 GCAGTATTGGAACAGAGGAGAGCCCAACAACGTTGGGGAGGAAGACTGCGCGGAATTTAGTGGCAATGGCTGGA 1021
||.|||.||||||||.|||||.||||||||....|||.|.||||||||.||||||||||||||||.||||||||
Sbjct 1352 GCGGTACTGGAACAGTGGAGAACCCAACAATAGCGGGAATGAAGACTGTGCGGAATTTAGTGGCAGTGGCTGGA 1425
Query 1022 ACGACGACAAATGTAATCTTGCCAAATTCTGGATCTGCAAAAAGTCCGCAGCCTCCTGCTCCAGGGATGAAGAA 1095
|||||.|...||||.|..|||.|||.|.||||||||||||||||.|||||| ||||||.|||.||.|||.|.
Sbjct 1426 ACGACAATCGATGTGACGTTGACAATTACTGGATCTGCAAAAAGCCCGCAG---CCTGCTTCAGAGACGAATAG 1496
Query 1096 CAGTTTCTTTCT-CCAGCCCCTGCCACC------------CCAAAC----CCCCCT------CCTGCG------ 1140
..||||| .|| |.||||.|.|||.|| |..||| |||.|| ||.|||
Sbjct 1497 TTGTTTC--CCTGCTAGCCTCAGCCTCCATTGTGGTATAGCAGAACTTCACCCACTTGTAAGCCAGCGCTTCTT 1568
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1569 CTCTCCATCCTTGGACCTTCACAAATGCCCTGAGACGGTTCTCTGTTCGATTTTTCATCCCCTATGAACCTGGG 1642
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1643 TCTTATTCTGTCCTTCTGATGCCTCCAAGTTTCCCTGGTGTAGAGCTTGTGTTCTTGGCCCATCCTTGGAGCTT 1716
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1717 TATAAGTGACCTGAGTGGGATGCATTTAGGGGGCGGGCTTGGTATGTTGTATGAATCCACTCTCTGTTCCTTTT 1790
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1791 GGAGATTAGACTATTTGGATTCATGTGTAGCTGCCCTGTCCCCTGGGGCTTTATCTCATCCATGCAAACTACCA 1864
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1865 TCTGCTCAACTTCCAGCTACACCCCGTGCACCCTTTTGACTGGGGACTTGCTGGTTGAAGGAGCTCATCTTGCA 1938
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1939 GGCTGGAAGCACCAGGGAATTAATTCCCCCAGTCAACCAATGGCATCCAGAGAGGGCATGGAGGCTCCATACAA 2012
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2013 CCTCTTCCACCCCCACATCTTTCTTTGTCCTATACATGTCTTCCATTTGGCTGTTTCTGAGTTGTAGCCTTTAT 2086
Query 1141 --------------------------- 1140
Sbjct 2087 AATAAAGTGGTAAATGTTGTAACTGCA 2113
