Nucleotide Global Alignment
Description
- Query:
- TRCN0000470842
- Subject:
- XR_936147.2
- Aligned Length:
- 1413
- Identities:
- 1003
- Gaps:
- 294
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACCCAGCTTCCTGTTTGTCTTCCTGAGAGACAGTAGATTTAGAAAGTGAGGATCAGAGGGTGGAAAATAAAAGC 74
Query 1 -ATGGCCTCAGCCTGCCCAGG---CTCTGATTTCACGTCT-------------ATCCAT-------TCAGAGGA 50
.||| |.|||||| | |||| ||.||| |..||| ||..||||
Sbjct 75 TGTGG--------TCCCCAGGAGTC-CTGA----ACATCTGGGGACAGCGGGAAAACATGAGTGACTCCAAGGA 135
Query 51 ---------GGAACAGCTGAGAGGCCT--TGGA--------------------------------TTCCGACAG 81
|.|.|||||| ||||| |||| ||||.|.||
Sbjct 136 ACCAAGGGTGCAGCAGCTG---GGCCTCCTGGAAGAAGATCCAACAACCAGTGGCATCAGACTTTTTCCAAGAG 206
Query 82 AC-------TCGAG--GAT--------ACAAGAG-------------CTTAGC--------------------- 104
|| ||.|| ||| ||||||| |||.||
Sbjct 207 ACTTTCAATTCCAGCAGATACATGGCCACAAGAGCTCTACAGGGTGTCTTGGCCATGGCGCCCTGGTGCTGCAA 280
Query 105 --------------------------------------------------AGTGTCCAAGGTCCCCAGCTCCAT 128
||||||||||||||||||||||.|
Sbjct 281 CTCCTCTCCTTCATGCTCTTGGCTGGGGTCCTGGTGGCCATCCTTGTCCAAGTGTCCAAGGTCCCCAGCTCCCT 354
Query 129 AAGTCAGGAACAATCCAGGCAAGACGCGATCTACCAGAACCTGACCCAGCTTAAAGCTGCAGTGGGTGAGCTCT 202
||||||||||||||||..|||||||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 355 AAGTCAGGAACAATCCGAGCAAGACGCAATCTACCAGAACCTGACCCAGCTTAAAGCTGCAGTGGGTGAGCTCT 428
Query 203 CAGAGAAATCCAAGCTGCAGGAGATCTACCAGGAGCTGACCCAGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAG 276
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|.||||||
Sbjct 429 CAGAGAAATCCAAGCTGCAGGAGATCTACCAGGAGCTGACCCAGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAG 502
Query 277 AAATCTAAGCTGCAGGAGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATC 350
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||.|.|||||||||||
Sbjct 503 AAATCCAAGCTGCAGGAGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATC 576
Query 351 TAAGCTGCAGGAGATCTACCAGGAGCTGACCTGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGA 424
.||||||||||||||||||||||||||||||.|||||||||||||||||||||||.|.|||||||||||.|||.
Sbjct 577 CAAGCTGCAGGAGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGC 650
Query 425 TGCAGGAGATCTACCAGGAGCTGACTCGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCAGCAG 498
|||||||||||||||||||||||||.||||||||||||||||||||||||.|.|||||||||||.||||.||||
Sbjct 651 TGCAGGAGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCAG 724
Query 499 GAGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCAGCAGGAGAT 572
||||||||||||||||||||...||||||||||||||||||||||.|.|||||||||||.||||.|||||||||
Sbjct 725 GAGATCTACCAGGAGCTGACGGAGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCAGGAGAT 798
Query 573 CTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCAGCAGGAGATCTACC 646
|||||||||||||||||.||||||||||||||||||||||.|.|||||..|.||.|||||||||.|.|||||.|
Sbjct 799 CTACCAGGAGCTGACCCAGCTGAAGGCTGCAGTGGGTGAGTTGCCAGACCAGTCCAAGCAGCAGCAAATCTATC 872
Query 647 AGGAGCTGACCCAGCTGAAGGCTGCAGTGGAACGCCTGTGCCACCCCTGTCCCTGGGAATGGACATTCTTCCAA 720
|.||.||||||.|..|||||.|||||.|.|||||||||||||.||.|||||||..|||.|||||||||||||||
Sbjct 873 AAGAACTGACCGATTTGAAGACTGCATTTGAACGCCTGTGCCGCCACTGTCCCAAGGACTGGACATTCTTCCAA 946
Query 721 GGAAACTGTTACTTCATGTCTAACTCCCAGCGGAACTGGCACGACTCCATCACCGCCTGCAAAGAAGTGGGGGC 794
||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.|.||||||.||||
Sbjct 947 GGAAACTGTTACTTCATGTCTAACTCCCAGCGGAACTGGCACGACTCCGTCACCGCCTGCCAGGAAGTGAGGGC 1020
Query 795 CCAGCTCGTCGTAATCAAAAGTGCTGAGGAGCAGAACTTCCTACAGCTGCAGTCTTCCAGAAGTAACCGCTTCA 868
||||||||||||||||||||.|||||||||||||||||||||||||||||||.|||||||.||||||||||||.
Sbjct 1021 CCAGCTCGTCGTAATCAAAACTGCTGAGGAGCAGAACTTCCTACAGCTGCAGACTTCCAGGAGTAACCGCTTCT 1094
Query 869 CCTGGATGGGACTTTCAGATCTAAATCAGGAAGGCACGTGGCAATGGGTGGACGGCTCACCTCTGTTGCCCAGC 942
|||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||..||||||
Sbjct 1095 CCTGGATGGGACTTTCAGACCTAAATCAGGAAGGCACGTGGCAATGGGTGGACGGCTCACCTCTGTCACCCAGC 1168
Query 943 TTCAAGCAGTATTGGAACAGAGGAGAGCCCAACAACGTTGGGGAGGAAGACTGCGCGGAATTTAGTGGCAATGG 1016
|||.|||.|||.||||||||.|||||.||||||||....|||.|.||||||||.||||||||||||||||.|||
Sbjct 1169 TTCCAGCGGTACTGGAACAGTGGAGAACCCAACAATAGCGGGAATGAAGACTGTGCGGAATTTAGTGGCAGTGG 1242
Query 1017 CTGGAACGACGACAAATGTAATCTTGCCAAATTCTGGATCTGCAAAAAGTCCGCAGCCTCCTGCTCCAGGGATG 1090
||||||||||.|...||||.|..|||.|||.|.||||||||||||||||.|||||| ||||||.|||.||.|
Sbjct 1243 CTGGAACGACAATCGATGTGACGTTGACAATTACTGGATCTGCAAAAAGCCCGCAG---CCTGCTTCAGAGACG 1313
Query 1091 AAGAACAGTTTCTTTCT-CCAGCCCCTGCCACC------------CCAAAC--CCCCCTCCTGCG--------- 1140
||.|...||||| .|| |.||||.|.|||.|| |..||| |.|||.|.|||.
Sbjct 1314 AATAGTTGTTTC--CCTGCTAGCCTCAGCCTCCATTGTGGTATAGCAGAACTTCACCCACTTGCTGGAGTGCAA 1385
Query 1141 ------- 1140
Sbjct 1386 TGGCACG 1392