Nucleotide Global Alignment

Description

Query:
TRCN0000470877
Subject:
NM_001331209.1
Aligned Length:
2160
Identities:
1838
Gaps:
63

Alignment

Query    1  ATGGCGGCGGCGGTAGCTGCGGC------GGGTCGGTTAGGCTGGTTGTTCGCCGCGCTCTGCCTGGGCAACGC  68
            |||||||||||   .||||||||      ||||.||||.||||||.||.|.||||||.||||.|||||||.|.|
Sbjct    1  ATGGCGGCGGC---TGCTGCGGCTGTGGTGGGTTGGTTGGGCTGGGTGCTTGCCGCGTTCTGTCTGGGCAGCAC  71

Query   69  CGCGGGGGAGG------CCGCGCCGGGCCCGCGAGTGCTGGGCTTCTGCCTGGAGGAGGATGGAGCGGCGGGCG  136
            |||.|||||||      |.|||||||||.||.||.|||||..|||||||..|||.|||||..|.||..||||||
Sbjct   72  CGCAGGGGAGGCGGCGCCGGCGCCGGGCGCGGGACTGCTGAACTTCTGCACGGAAGAGGACAGCGCACCGGGCG  145

Query  137  CGGGTTGGGTACGCGGAGGGGCGGCGCGGGACACGCCGGACGCCACCTTCCTCCTGCGCCTCTTCGGCCCGGGC  210
            ||||.|...|.||||||.||||.|         ||||.||.|||||.||...|.||||.||||||.||.|.|||
Sbjct  146  CGGGCTCCCTGCGCGGAAGGGCAG---------CGCCAGAGGCCACTTTGTGCTTGCGACTCTTCTGCTCCGGC  210

Query  211  TTCGCCAACAGCTCTTGGTCCTGGGTGGCCCCGGAGGGGGCGGGCTGCCGG-----------------------  261
            ||.|||||||||||.|||.|||||||.|||.|.|||||.||.|||||||.|                       
Sbjct  211  TTGGCCAACAGCTCCTGGACCTGGGTAGCCGCCGAGGGCGCAGGCTGCCCGGAGGGCGGACGGGCCACGGAGCC  284

Query  262  -GAGGAGGCGGCCTCCCCCGCGGGCGAGTGGCGCGCGCTGCTGCGCTTGCGCCTGCGGGCCGAGGCCGTGCGCC  334
             ||||||||||||.||||..|||||||||||||||||||||      ||||||||||.||||||||||..|.||
Sbjct  285  CGAGGAGGCGGCCGCCCCGACGGGCGAGTGGCGCGCGCTGC------TGCGCCTGCGCGCCGAGGCCGGCCACC  352

Query  335  CGCACTCGGCGCTGCTGGCGGTGCGCGTGGAGCCGGGTGGCGGGGCGGCTGAGGAGGCGGCGCCGCCCTGGGCT  408
            |||.|||.||||||||||||||||||||||||||||||||.|||||.||.|||||||||||||||||||||||.
Sbjct  353  CGCGCTCCGCGCTGCTGGCGGTGCGCGTGGAGCCGGGTGGTGGGGCCGCGGAGGAGGCGGCGCCGCCCTGGGCG  426

Query  409  CTGGGCCTGGGGGCGGCCGGGCTGCTGGCGCTGGCAGCGCTGGCGCGAGGCCTGCAGCTGAGCGCGCTGGCGCT  482
            |||||.|||||||||||||||||||||||.|||||.|||.|||||||.||||||||||||||||||||||||||
Sbjct  427  CTGGGGCTGGGGGCGGCCGGGCTGCTGGCCCTGGCGGCGGTGGCGCGCGGCCTGCAGCTGAGCGCGCTGGCGCT  500

Query  483  GGCGCCTGCCGAGGTGCAGGTGCTGCGCGAGAGCGGCTCGGAGGCGGAGCGTGCGGCGGCGCGGCGTTTGGAGC  556
            ||||||.||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||..||||.|
Sbjct  501  GGCGCCGGCCGAGGTGCAGGTGCTGCGCGAGAGCGGCTCGGAGGCGGAGCGCGCGGCGGCGCGGCGCCTGGAAC  574

Query  557  CCGCGCGGCGCTGGGCCGGCTGCGCCTTGGGCGCGCTGCTGCTGCTGGCCAGCCTGGCGCAGGCGGCGCTGGCG  630
            ||||||||||||||||||||||||||.||||||||||||||||.|||||||||||||||||||||||.|||||.
Sbjct  575  CCGCGCGGCGCTGGGCCGGCTGCGCCCTGGGCGCGCTGCTGCTTCTGGCCAGCCTGGCGCAGGCGGCACTGGCC  648

Query  631  GTGCTGCTGTACCGCGCGGCCGGCCAGCGTGCGGTGCCCGCCGTGTTGGGCAGCGCGGGGCTCGTGTTCCTGGT  704
            ||||||||||||.|.|||||.||||||||.||.||||||||||||.||||..||||||||||.|||||||||||
Sbjct  649  GTGCTGCTGTACGGGGCGGCGGGCCAGCGCGCCGTGCCCGCCGTGCTGGGTTGCGCGGGGCTGGTGTTCCTGGT  722

Query  705  GGGAGAGGTGGTGCCGGCCGCCGTGAGCGGGCGCTGGACGCTGGCGCTGGCGCCGCGAGCGCTCGGCCTCAGCC  778
            |||.||||||.|||||||||||||||||||.||||||.|||||||||||||||||||.|||.|.||||||||||
Sbjct  723  GGGTGAGGTGCTGCCGGCCGCCGTGAGCGGACGCTGGGCGCTGGCGCTGGCGCCGCGCGCGTTGGGCCTCAGCC  796

Query  779  GCCTGGCCGTCCTGCTCACTCTGCCCGTCGCGCTGCCCGTGGGGCAGCTGCTGGAGCTGGCGGCGCGGCCCGGG  852
            |||||||.||.||||||||..|||||||.||||||||.||.||||||||||||||||||||.||||||||.|||
Sbjct  797  GCCTGGCGGTGCTGCTCACCTTGCCCGTGGCGCTGCCGGTCGGGCAGCTGCTGGAGCTGGCAGCGCGGCCGGGG  870

Query  853  CGGCTGCGGGAGCGGGTGCTGGAGCTGGCGCGCGGCGGCGGTGACCCCTACAGCGATCTCAGCAAGGGCGTGCT  926
            ||.|||||||||||.||||||||||||||||||||||||||.||||||||||||||.|||||||||||.|||||
Sbjct  871  CGTCTGCGGGAGCGCGTGCTGGAGCTGGCGCGCGGCGGCGGCGACCCCTACAGCGACCTCAGCAAGGGAGTGCT  944

Query  927  GCGCTGCCGGACCGTGGAGGACGTGCTCACGCCCCTCGAAGACTGCTTCATGCTGGACGCCAGCACCGTGCTGG  1000
            |||||.|||||||||||||||||||||||||||.||||||||||||||.|||||||||.||.||||.||.||.|
Sbjct  945  GCGCTCCCGGACCGTGGAGGACGTGCTCACGCCGCTCGAAGACTGCTTTATGCTGGACTCCGGCACTGTCCTAG  1018

Query 1001  ACTTCGGCGTCCTGGCCAGCATCATGCAGAGCGGCCACACGCGCATCCCGGTGTACGAGGAGGAGCGCTCCAAC  1074
            |||||.|||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 1019  ACTTCAGCGTCCTCGCCAGCATCATGCAGAGCGGCCACACGCGCATCCCAGTGTACGAGGAGGAGCGCTCCAAC  1092

Query 1075  ATCGTGGACATGCTCTACCTCAAGGACTTGGCCTTCGTGGATCCCGAAGACTGCACGCCGCTCAGCACCATCAC  1148
            |||||||||||||||||||||||.||||||||..||||.||.|||||.||||||||.|||||||||||||||||
Sbjct 1093  ATCGTGGACATGCTCTACCTCAAAGACTTGGCTATCGTTGAGCCCGAGGACTGCACACCGCTCAGCACCATCAC  1166

Query 1149  TCGTTTCTACAACCATCCGCTCCACTTCGTCTTCAACGACACCAAGCTGGACGCTGTCCTGGAGGAATTCAAGC  1222
            .||.||||||||||||||.||||||||.|||||||||||.|||||.||||||||||||||||||||.|||||||
Sbjct 1167  CCGCTTCTACAACCATCCACTCCACTTTGTCTTCAACGATACCAAACTGGACGCTGTCCTGGAGGAGTTCAAGC  1240

Query 1223  GAGGGAAGTCCCACCTGGCCATCGTGCAGAAGGTGAACAACGAGGGTGAAGGCGACCCCTTCTACGAGGTCCTG  1296
            ||||.|||||||||||||||||.|||||||||||||||||.|||||.||.||||||||||||||||||||.|||
Sbjct 1241  GAGGCAAGTCCCACCTGGCCATTGTGCAGAAGGTGAACAATGAGGGCGAGGGCGACCCCTTCTACGAGGTGCTG  1314

Query 1297  GGCCTGGTCACCCTGGAGGACGTGATCGAGGAGATCATCAGGTCCGAGATCCTGGACGAGTCTGAAGACTACCG  1370
            |||||||||||||||||||||||.||||||||||||||||.|||.||||||.||||.|||||||||||||||  
Sbjct 1315  GGCCTGGTCACCCTGGAGGACGTCATCGAGGAGATCATCAAGTCTGAGATCTTGGATGAGTCTGAAGACTAC--  1386

Query 1371  AGACACCGTGGTGAAGAGGAAGCCTGCTTCTCTGATGGCCCCTCTGAAGCGGAAGGAGGAGTTCTCCTTGTTCA  1444
             .||||...|||||.||.||||.|.|...|.|||...||.|||||.|||||.||||||||.||||||||.||||
Sbjct 1387  -TACACAAAGGTGAGGAAGAAGACCGTCGCCCTGGGAGCTCCTCTCAAGCGAAAGGAGGAATTCTCCTTATTCA  1459

Query 1445  AGGTGTCTGATGATGAATATAAAGTAACAATCTCGCCTCAGCTGCTCTTGGCCACCCAGCGCTTCCTGTCCCGA  1518
            |||||||||||||||||||||||||||.|||||||||||||||||||.|||||||||||||||||||.||||||
Sbjct 1460  AGGTGTCTGATGATGAATATAAAGTAAAAATCTCGCCTCAGCTGCTCCTGGCCACCCAGCGCTTCCTTTCCCGA  1533

Query 1519  GAAGTGGATGTATTCAGCCCGCTGCGCATCTCTGAGAAGGTCCTGCTGCACCTGTTGAAGCATCCCAGTGTCAA  1592
            ||.||||||||.||||||||..||||..||||||||||.|||.|||||||||||.|||||||||||||||||||
Sbjct 1534  GAGGTGGATGTGTTCAGCCCATTGCGAGTCTCTGAGAAAGTCTTGCTGCACCTGCTGAAGCATCCCAGTGTCAA  1607

Query 1593  CCAGGAAGTGAGGTTTGACGAGAGCAACCGGCTGGCCACACACCACTACCTGTACCAGCGCAGCCAGCCGGTGG  1666
            ||||||.||||.||||||||||||||||||.||||||.|||||||.||.||||||||||||||||||||.||.|
Sbjct 1608  CCAGGAGGTGACGTTTGACGAGAGCAACCGCCTGGCCGCACACCATTATCTGTACCAGCGCAGCCAGCCAGTAG  1681

Query 1667  ATTACTTCATTCTCATCCTGCAGGGCAGGGTTGAAGTGGAGATCGGGAAAGAGGGTCTGAAGTTTGAGAATGGG  1740
            ||||||||||||||||.|||||||||||.||.||.||.||.||.|||||||||||.||||||||.|||||.|||
Sbjct 1682  ATTACTTCATTCTCATTCTGCAGGGCAGAGTCGAGGTCGAAATTGGGAAAGAGGGCCTGAAGTTCGAGAACGGG  1755

Query 1741  GCCTTCACGTACTATGGAGTGTCGGCCCTAACTGTGCCATCCTCGGTTCACCAGTCCCCGGTGTCCTCGCTCCA  1814
            |||||||||||||||||||||||.|||||.||.|..||||||||.|.||||||||||||.|||||.||.|.|||
Sbjct 1756  GCCTTCACGTACTATGGAGTGTCCGCCCTGACAGCCCCATCCTCAGCTCACCAGTCCCCAGTGTCTTCACGCCA  1829

Query 1815  GCCCATCCGCCATGACCTGCAGCCCGACCCAGGTGACGGCACGCATTCATCTG--CGTATTGTCCCGACTACAC  1886
            ||.|||||||||||||.|||||||.||.||||..||.||.||.|..||  |||  |.||.|||||.||||||||
Sbjct 1830  GCTCATCCGCCATGACGTGCAGCCTGAACCAGCCGATGGTACCCGCTC--CTGCACATACTGTCCTGACTACAC  1901

Query 1887  CGTGAGGGCGCTCTCTGATCTGCAGCTCATCAAGGTTACGCGACTGCAGTACCTCAATGCACTCCTGGCTACCC  1960
            .||||||||.||.||.||.|||||||||||.|||||.||.||.|||||||||||.|||||||||||||||||||
Sbjct 1902  TGTGAGGGCCCTTTCCGACCTGCAGCTCATTAAGGTCACACGGCTGCAGTACCTTAATGCACTCCTGGCTACCC  1975

Query 1961  GAGCCCAGAACCTGCCACAGTCCCCTGAGAACACCGACCTGCAGGTTATTCCAGGCAGCCAGACCAGGCTCCTT  2034
            |||||||.|.|.||||.|..|||||.||||||.|.||.||.||||.|||.||||||||||||||||||||||||
Sbjct 1976  GAGCCCAAAGCTTGCCTCCATCCCCAGAGAACGCTGAGCTCCAGGCTATCCCAGGCAGCCAGACCAGGCTCCTT  2049

Query 2035  GGTGAGAAGACCACCACAG-CGGCAGGGTCCAGCCACAGCAGGCCCGGCGTCCCGGTGGAAGGCAGCCCTGGGC  2107
            |||||.|||.||| .|.|| |.||||||||||.|.|||||||.|||.||.||||.|||||.|..||||||||||
Sbjct 2050  GGTGACAAGTCCA-GAGAGACAGCAGGGTCCACCAACAGCAGACCCAGCATCCCAGTGGAGGAGAGCCCTGGGC  2122

Query 2108  GGAACCCAGGCGTT  2121
            ||||||||||.||.
Sbjct 2123  GGAACCCAGGAGTG  2136

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