Nucleotide Global Alignment
Description
- Query:
- TRCN0000470877
- Subject:
- NM_001331209.1
- Aligned Length:
- 2160
- Identities:
- 1838
- Gaps:
- 63
Alignment
Query 1 ATGGCGGCGGCGGTAGCTGCGGC------GGGTCGGTTAGGCTGGTTGTTCGCCGCGCTCTGCCTGGGCAACGC 68
||||||||||| .|||||||| ||||.||||.||||||.||.|.||||||.||||.|||||||.|.|
Sbjct 1 ATGGCGGCGGC---TGCTGCGGCTGTGGTGGGTTGGTTGGGCTGGGTGCTTGCCGCGTTCTGTCTGGGCAGCAC 71
Query 69 CGCGGGGGAGG------CCGCGCCGGGCCCGCGAGTGCTGGGCTTCTGCCTGGAGGAGGATGGAGCGGCGGGCG 136
|||.||||||| |.|||||||||.||.||.|||||..|||||||..|||.|||||..|.||..||||||
Sbjct 72 CGCAGGGGAGGCGGCGCCGGCGCCGGGCGCGGGACTGCTGAACTTCTGCACGGAAGAGGACAGCGCACCGGGCG 145
Query 137 CGGGTTGGGTACGCGGAGGGGCGGCGCGGGACACGCCGGACGCCACCTTCCTCCTGCGCCTCTTCGGCCCGGGC 210
||||.|...|.||||||.||||.| ||||.||.|||||.||...|.||||.||||||.||.|.|||
Sbjct 146 CGGGCTCCCTGCGCGGAAGGGCAG---------CGCCAGAGGCCACTTTGTGCTTGCGACTCTTCTGCTCCGGC 210
Query 211 TTCGCCAACAGCTCTTGGTCCTGGGTGGCCCCGGAGGGGGCGGGCTGCCGG----------------------- 261
||.|||||||||||.|||.|||||||.|||.|.|||||.||.|||||||.|
Sbjct 211 TTGGCCAACAGCTCCTGGACCTGGGTAGCCGCCGAGGGCGCAGGCTGCCCGGAGGGCGGACGGGCCACGGAGCC 284
Query 262 -GAGGAGGCGGCCTCCCCCGCGGGCGAGTGGCGCGCGCTGCTGCGCTTGCGCCTGCGGGCCGAGGCCGTGCGCC 334
||||||||||||.||||..||||||||||||||||||||| ||||||||||.||||||||||..|.||
Sbjct 285 CGAGGAGGCGGCCGCCCCGACGGGCGAGTGGCGCGCGCTGC------TGCGCCTGCGCGCCGAGGCCGGCCACC 352
Query 335 CGCACTCGGCGCTGCTGGCGGTGCGCGTGGAGCCGGGTGGCGGGGCGGCTGAGGAGGCGGCGCCGCCCTGGGCT 408
|||.|||.||||||||||||||||||||||||||||||||.|||||.||.|||||||||||||||||||||||.
Sbjct 353 CGCGCTCCGCGCTGCTGGCGGTGCGCGTGGAGCCGGGTGGTGGGGCCGCGGAGGAGGCGGCGCCGCCCTGGGCG 426
Query 409 CTGGGCCTGGGGGCGGCCGGGCTGCTGGCGCTGGCAGCGCTGGCGCGAGGCCTGCAGCTGAGCGCGCTGGCGCT 482
|||||.|||||||||||||||||||||||.|||||.|||.|||||||.||||||||||||||||||||||||||
Sbjct 427 CTGGGGCTGGGGGCGGCCGGGCTGCTGGCCCTGGCGGCGGTGGCGCGCGGCCTGCAGCTGAGCGCGCTGGCGCT 500
Query 483 GGCGCCTGCCGAGGTGCAGGTGCTGCGCGAGAGCGGCTCGGAGGCGGAGCGTGCGGCGGCGCGGCGTTTGGAGC 556
||||||.||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||..||||.|
Sbjct 501 GGCGCCGGCCGAGGTGCAGGTGCTGCGCGAGAGCGGCTCGGAGGCGGAGCGCGCGGCGGCGCGGCGCCTGGAAC 574
Query 557 CCGCGCGGCGCTGGGCCGGCTGCGCCTTGGGCGCGCTGCTGCTGCTGGCCAGCCTGGCGCAGGCGGCGCTGGCG 630
||||||||||||||||||||||||||.||||||||||||||||.|||||||||||||||||||||||.|||||.
Sbjct 575 CCGCGCGGCGCTGGGCCGGCTGCGCCCTGGGCGCGCTGCTGCTTCTGGCCAGCCTGGCGCAGGCGGCACTGGCC 648
Query 631 GTGCTGCTGTACCGCGCGGCCGGCCAGCGTGCGGTGCCCGCCGTGTTGGGCAGCGCGGGGCTCGTGTTCCTGGT 704
||||||||||||.|.|||||.||||||||.||.||||||||||||.||||..||||||||||.|||||||||||
Sbjct 649 GTGCTGCTGTACGGGGCGGCGGGCCAGCGCGCCGTGCCCGCCGTGCTGGGTTGCGCGGGGCTGGTGTTCCTGGT 722
Query 705 GGGAGAGGTGGTGCCGGCCGCCGTGAGCGGGCGCTGGACGCTGGCGCTGGCGCCGCGAGCGCTCGGCCTCAGCC 778
|||.||||||.|||||||||||||||||||.||||||.|||||||||||||||||||.|||.|.||||||||||
Sbjct 723 GGGTGAGGTGCTGCCGGCCGCCGTGAGCGGACGCTGGGCGCTGGCGCTGGCGCCGCGCGCGTTGGGCCTCAGCC 796
Query 779 GCCTGGCCGTCCTGCTCACTCTGCCCGTCGCGCTGCCCGTGGGGCAGCTGCTGGAGCTGGCGGCGCGGCCCGGG 852
|||||||.||.||||||||..|||||||.||||||||.||.||||||||||||||||||||.||||||||.|||
Sbjct 797 GCCTGGCGGTGCTGCTCACCTTGCCCGTGGCGCTGCCGGTCGGGCAGCTGCTGGAGCTGGCAGCGCGGCCGGGG 870
Query 853 CGGCTGCGGGAGCGGGTGCTGGAGCTGGCGCGCGGCGGCGGTGACCCCTACAGCGATCTCAGCAAGGGCGTGCT 926
||.|||||||||||.||||||||||||||||||||||||||.||||||||||||||.|||||||||||.|||||
Sbjct 871 CGTCTGCGGGAGCGCGTGCTGGAGCTGGCGCGCGGCGGCGGCGACCCCTACAGCGACCTCAGCAAGGGAGTGCT 944
Query 927 GCGCTGCCGGACCGTGGAGGACGTGCTCACGCCCCTCGAAGACTGCTTCATGCTGGACGCCAGCACCGTGCTGG 1000
|||||.|||||||||||||||||||||||||||.||||||||||||||.|||||||||.||.||||.||.||.|
Sbjct 945 GCGCTCCCGGACCGTGGAGGACGTGCTCACGCCGCTCGAAGACTGCTTTATGCTGGACTCCGGCACTGTCCTAG 1018
Query 1001 ACTTCGGCGTCCTGGCCAGCATCATGCAGAGCGGCCACACGCGCATCCCGGTGTACGAGGAGGAGCGCTCCAAC 1074
|||||.|||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 1019 ACTTCAGCGTCCTCGCCAGCATCATGCAGAGCGGCCACACGCGCATCCCAGTGTACGAGGAGGAGCGCTCCAAC 1092
Query 1075 ATCGTGGACATGCTCTACCTCAAGGACTTGGCCTTCGTGGATCCCGAAGACTGCACGCCGCTCAGCACCATCAC 1148
|||||||||||||||||||||||.||||||||..||||.||.|||||.||||||||.|||||||||||||||||
Sbjct 1093 ATCGTGGACATGCTCTACCTCAAAGACTTGGCTATCGTTGAGCCCGAGGACTGCACACCGCTCAGCACCATCAC 1166
Query 1149 TCGTTTCTACAACCATCCGCTCCACTTCGTCTTCAACGACACCAAGCTGGACGCTGTCCTGGAGGAATTCAAGC 1222
.||.||||||||||||||.||||||||.|||||||||||.|||||.||||||||||||||||||||.|||||||
Sbjct 1167 CCGCTTCTACAACCATCCACTCCACTTTGTCTTCAACGATACCAAACTGGACGCTGTCCTGGAGGAGTTCAAGC 1240
Query 1223 GAGGGAAGTCCCACCTGGCCATCGTGCAGAAGGTGAACAACGAGGGTGAAGGCGACCCCTTCTACGAGGTCCTG 1296
||||.|||||||||||||||||.|||||||||||||||||.|||||.||.||||||||||||||||||||.|||
Sbjct 1241 GAGGCAAGTCCCACCTGGCCATTGTGCAGAAGGTGAACAATGAGGGCGAGGGCGACCCCTTCTACGAGGTGCTG 1314
Query 1297 GGCCTGGTCACCCTGGAGGACGTGATCGAGGAGATCATCAGGTCCGAGATCCTGGACGAGTCTGAAGACTACCG 1370
|||||||||||||||||||||||.||||||||||||||||.|||.||||||.||||.|||||||||||||||
Sbjct 1315 GGCCTGGTCACCCTGGAGGACGTCATCGAGGAGATCATCAAGTCTGAGATCTTGGATGAGTCTGAAGACTAC-- 1386
Query 1371 AGACACCGTGGTGAAGAGGAAGCCTGCTTCTCTGATGGCCCCTCTGAAGCGGAAGGAGGAGTTCTCCTTGTTCA 1444
.||||...|||||.||.||||.|.|...|.|||...||.|||||.|||||.||||||||.||||||||.||||
Sbjct 1387 -TACACAAAGGTGAGGAAGAAGACCGTCGCCCTGGGAGCTCCTCTCAAGCGAAAGGAGGAATTCTCCTTATTCA 1459
Query 1445 AGGTGTCTGATGATGAATATAAAGTAACAATCTCGCCTCAGCTGCTCTTGGCCACCCAGCGCTTCCTGTCCCGA 1518
|||||||||||||||||||||||||||.|||||||||||||||||||.|||||||||||||||||||.||||||
Sbjct 1460 AGGTGTCTGATGATGAATATAAAGTAAAAATCTCGCCTCAGCTGCTCCTGGCCACCCAGCGCTTCCTTTCCCGA 1533
Query 1519 GAAGTGGATGTATTCAGCCCGCTGCGCATCTCTGAGAAGGTCCTGCTGCACCTGTTGAAGCATCCCAGTGTCAA 1592
||.||||||||.||||||||..||||..||||||||||.|||.|||||||||||.|||||||||||||||||||
Sbjct 1534 GAGGTGGATGTGTTCAGCCCATTGCGAGTCTCTGAGAAAGTCTTGCTGCACCTGCTGAAGCATCCCAGTGTCAA 1607
Query 1593 CCAGGAAGTGAGGTTTGACGAGAGCAACCGGCTGGCCACACACCACTACCTGTACCAGCGCAGCCAGCCGGTGG 1666
||||||.||||.||||||||||||||||||.||||||.|||||||.||.||||||||||||||||||||.||.|
Sbjct 1608 CCAGGAGGTGACGTTTGACGAGAGCAACCGCCTGGCCGCACACCATTATCTGTACCAGCGCAGCCAGCCAGTAG 1681
Query 1667 ATTACTTCATTCTCATCCTGCAGGGCAGGGTTGAAGTGGAGATCGGGAAAGAGGGTCTGAAGTTTGAGAATGGG 1740
||||||||||||||||.|||||||||||.||.||.||.||.||.|||||||||||.||||||||.|||||.|||
Sbjct 1682 ATTACTTCATTCTCATTCTGCAGGGCAGAGTCGAGGTCGAAATTGGGAAAGAGGGCCTGAAGTTCGAGAACGGG 1755
Query 1741 GCCTTCACGTACTATGGAGTGTCGGCCCTAACTGTGCCATCCTCGGTTCACCAGTCCCCGGTGTCCTCGCTCCA 1814
|||||||||||||||||||||||.|||||.||.|..||||||||.|.||||||||||||.|||||.||.|.|||
Sbjct 1756 GCCTTCACGTACTATGGAGTGTCCGCCCTGACAGCCCCATCCTCAGCTCACCAGTCCCCAGTGTCTTCACGCCA 1829
Query 1815 GCCCATCCGCCATGACCTGCAGCCCGACCCAGGTGACGGCACGCATTCATCTG--CGTATTGTCCCGACTACAC 1886
||.|||||||||||||.|||||||.||.||||..||.||.||.|..|| ||| |.||.|||||.||||||||
Sbjct 1830 GCTCATCCGCCATGACGTGCAGCCTGAACCAGCCGATGGTACCCGCTC--CTGCACATACTGTCCTGACTACAC 1901
Query 1887 CGTGAGGGCGCTCTCTGATCTGCAGCTCATCAAGGTTACGCGACTGCAGTACCTCAATGCACTCCTGGCTACCC 1960
.||||||||.||.||.||.|||||||||||.|||||.||.||.|||||||||||.|||||||||||||||||||
Sbjct 1902 TGTGAGGGCCCTTTCCGACCTGCAGCTCATTAAGGTCACACGGCTGCAGTACCTTAATGCACTCCTGGCTACCC 1975
Query 1961 GAGCCCAGAACCTGCCACAGTCCCCTGAGAACACCGACCTGCAGGTTATTCCAGGCAGCCAGACCAGGCTCCTT 2034
|||||||.|.|.||||.|..|||||.||||||.|.||.||.||||.|||.||||||||||||||||||||||||
Sbjct 1976 GAGCCCAAAGCTTGCCTCCATCCCCAGAGAACGCTGAGCTCCAGGCTATCCCAGGCAGCCAGACCAGGCTCCTT 2049
Query 2035 GGTGAGAAGACCACCACAG-CGGCAGGGTCCAGCCACAGCAGGCCCGGCGTCCCGGTGGAAGGCAGCCCTGGGC 2107
|||||.|||.||| .|.|| |.||||||||||.|.|||||||.|||.||.||||.|||||.|..||||||||||
Sbjct 2050 GGTGACAAGTCCA-GAGAGACAGCAGGGTCCACCAACAGCAGACCCAGCATCCCAGTGGAGGAGAGCCCTGGGC 2122
Query 2108 GGAACCCAGGCGTT 2121
||||||||||.||.
Sbjct 2123 GGAACCCAGGAGTG 2136