Nucleotide Global Alignment

Description

• Query: TRCN0000470877
• Subject: NM_053186.3
• Aligned Length: 2160
• Identities: 1840
• Gaps: 60

Alignment

Query    1  ATGGCGGCGGCGGTAGCTGCGGC------GGGTCGGTTAGGCTGGTTGTTCGCCGCGCTCTGCCTGGGCAACGC  68
            |||||||||||   .||||||||      ||||.||||.||||||.||.|.||||||.||||.|||||||.|.|
Sbjct    1  ATGGCGGCGGC---TGCTGCGGCTGTGGTGGGTTGGTTGGGCTGGGTGCTTGCCGCGTTCTGTCTGGGCAGCAC  71

Query   69  CGCGGGGGAGG------CCGCGCCGGGCCCGCGAGTGCTGGGCTTCTGCCTGGAGGAGGATGGAGCGGCGGGCG  136
            |||.|||||||      |.|||||||||.||.||.|||||..|||||||..|||.|||||..|.||..||||||
Sbjct   72  CGCAGGGGAGGCGGCGCCGGCGCCGGGCGCGGGACTGCTGAACTTCTGCACGGAAGAGGACAGCGCACCGGGCG  145

Query  137  CGGGTTGGGTACGCGGAGGGGCGGCGCGGGACACGCCGGACGCCACCTTCCTCCTGCGCCTCTTCGGCCCGGGC  210
            ||||.|...|.||||||.||||.|         ||||.||.|||||.||...|.||||.||||||.||.|.|||
Sbjct  146  CGGGCTCCCTGCGCGGAAGGGCAG---------CGCCAGAGGCCACTTTGTGCTTGCGACTCTTCTGCTCCGGC  210

Query  211  TTCGCCAACAGCTCTTGGTCCTGGGTGGCCCCGGAGGGGGCGGGCTGCCGG-----------------------  261
            ||.|||||||||||.|||.|||||||.|||.|.|||||.||.|||||||.|                       
Sbjct  211  TTGGCCAACAGCTCCTGGACCTGGGTAGCCGCCGAGGGCGCAGGCTGCCCGGAGGGCGGACGGGCCACGGAGCC  284

Query  262  -GAGGAGGCGGCCTCCCCCGCGGGCGAGTGGCGCGCGCTGCTGCGCTTGCGCCTGCGGGCCGAGGCCGTGCGCC  334
             ||||||||||||.||||..|||||||||||||||||||||      ||||||||||.||||||||||..|.||
Sbjct  285  CGAGGAGGCGGCCGCCCCGACGGGCGAGTGGCGCGCGCTGC------TGCGCCTGCGCGCCGAGGCCGGCCACC  352

Query  335  CGCACTCGGCGCTGCTGGCGGTGCGCGTGGAGCCGGGTGGCGGGGCGGCTGAGGAGGCGGCGCCGCCCTGGGCT  408
            |||.|||.||||||||||||||||||||||||||||||||.|||||.||.|||||||||||||||||||||||.
Sbjct  353  CGCGCTCCGCGCTGCTGGCGGTGCGCGTGGAGCCGGGTGGTGGGGCCGCGGAGGAGGCGGCGCCGCCCTGGGCG  426

Query  409  CTGGGCCTGGGGGCGGCCGGGCTGCTGGCGCTGGCAGCGCTGGCGCGAGGCCTGCAGCTGAGCGCGCTGGCGCT  482
            |||||.|||||||||||||||||||||||.|||||.|||.|||||||.||||||||||||||||||||||||||
Sbjct  427  CTGGGGCTGGGGGCGGCCGGGCTGCTGGCCCTGGCGGCGGTGGCGCGCGGCCTGCAGCTGAGCGCGCTGGCGCT  500

Query  483  GGCGCCTGCCGAGGTGCAGGTGCTGCGCGAGAGCGGCTCGGAGGCGGAGCGTGCGGCGGCGCGGCGTTTGGAGC  556
            ||||||.||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||..||||.|
Sbjct  501  GGCGCCGGCCGAGGTGCAGGTGCTGCGCGAGAGCGGCTCGGAGGCGGAGCGCGCGGCGGCGCGGCGCCTGGAAC  574

Query  557  CCGCGCGGCGCTGGGCCGGCTGCGCCTTGGGCGCGCTGCTGCTGCTGGCCAGCCTGGCGCAGGCGGCGCTGGCG  630
            ||||||||||||||||||||||||||.||||||||||||||||.|||||||||||||||||||||||.|||||.
Sbjct  575  CCGCGCGGCGCTGGGCCGGCTGCGCCCTGGGCGCGCTGCTGCTTCTGGCCAGCCTGGCGCAGGCGGCACTGGCC  648

Query  631  GTGCTGCTGTACCGCGCGGCCGGCCAGCGTGCGGTGCCCGCCGTGTTGGGCAGCGCGGGGCTCGTGTTCCTGGT  704
            ||||||||||||.|.|||||.||||||||.||.||||||||||||.||||..||||||||||.|||||||||||
Sbjct  649  GTGCTGCTGTACGGGGCGGCGGGCCAGCGCGCCGTGCCCGCCGTGCTGGGTTGCGCGGGGCTGGTGTTCCTGGT  722

Query  705  GGGAGAGGTGGTGCCGGCCGCCGTGAGCGGGCGCTGGACGCTGGCGCTGGCGCCGCGAGCGCTCGGCCTCAGCC  778
            |||.||||||.|||||||||||||||||||.||||||.|||||||||||||||||||.|||.|.||||||||||
Sbjct  723  GGGTGAGGTGCTGCCGGCCGCCGTGAGCGGACGCTGGGCGCTGGCGCTGGCGCCGCGCGCGTTGGGCCTCAGCC  796

Query  779  GCCTGGCCGTCCTGCTCACTCTGCCCGTCGCGCTGCCCGTGGGGCAGCTGCTGGAGCTGGCGGCGCGGCCCGGG  852
            |||||||.||.||||||||..|||||||.||||||||.||.||||||||||||||||||||.||||||||.|||
Sbjct  797  GCCTGGCGGTGCTGCTCACCTTGCCCGTGGCGCTGCCGGTCGGGCAGCTGCTGGAGCTGGCAGCGCGGCCGGGG  870

Query  853  CGGCTGCGGGAGCGGGTGCTGGAGCTGGCGCGCGGCGGCGGTGACCCCTACAGCGATCTCAGCAAGGGCGTGCT  926
            ||.|||||||||||.||||||||||||||||||||||||||.||||||||||||||.|||||||||||.|||||
Sbjct  871  CGTCTGCGGGAGCGCGTGCTGGAGCTGGCGCGCGGCGGCGGCGACCCCTACAGCGACCTCAGCAAGGGAGTGCT  944

Query  927  GCGCTGCCGGACCGTGGAGGACGTGCTCACGCCCCTCGAAGACTGCTTCATGCTGGACGCCAGCACCGTGCTGG  1000
            |||||.|||||||||||||||||||||||||||.||||||||||||||.|||||||||.||.||||.||.||.|
Sbjct  945  GCGCTCCCGGACCGTGGAGGACGTGCTCACGCCGCTCGAAGACTGCTTTATGCTGGACTCCGGCACTGTCCTAG  1018

Query 1001  ACTTCGGCGTCCTGGCCAGCATCATGCAGAGCGGCCACACGCGCATCCCGGTGTACGAGGAGGAGCGCTCCAAC  1074
            |||||.|||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 1019  ACTTCAGCGTCCTCGCCAGCATCATGCAGAGCGGCCACACGCGCATCCCAGTGTACGAGGAGGAGCGCTCCAAC  1092

Query 1075  ATCGTGGACATGCTCTACCTCAAGGACTTGGCCTTCGTGGATCCCGAAGACTGCACGCCGCTCAGCACCATCAC  1148
            |||||||||||||||||||||||.||||||||..||||.||.|||||.||||||||.|||||||||||||||||
Sbjct 1093  ATCGTGGACATGCTCTACCTCAAAGACTTGGCTATCGTTGAGCCCGAGGACTGCACACCGCTCAGCACCATCAC  1166

Query 1149  TCGTTTCTACAACCATCCGCTCCACTTCGTCTTCAACGACACCAAGCTGGACGCTGTCCTGGAGGAATTCAAGC  1222
            .||.||||||||||||||.||||||||.|||||||||||.|||||.||||||||||||||||||||.|||||||
Sbjct 1167  CCGCTTCTACAACCATCCACTCCACTTTGTCTTCAACGATACCAAACTGGACGCTGTCCTGGAGGAGTTCAAGC  1240

Query 1223  GAGGGAAGTCCCACCTGGCCATCGTGCAGAAGGTGAACAACGAGGGTGAAGGCGACCCCTTCTACGAGGTCCTG  1296
            ||||.|||||||||||||||||.|||||||||||||||||.|||||.||.||||||||||||||||||||.|||
Sbjct 1241  GAGGCAAGTCCCACCTGGCCATTGTGCAGAAGGTGAACAATGAGGGCGAGGGCGACCCCTTCTACGAGGTGCTG  1314

Query 1297  GGCCTGGTCACCCTGGAGGACGTGATCGAGGAGATCATCAGGTCCGAGATCCTGGACGAGTCTGAAGACTACCG  1370
            |||||||||||||||||||||||.||||||||||||||||.|||.||||||.||||.|||||||||||||||..
Sbjct 1315  GGCCTGGTCACCCTGGAGGACGTCATCGAGGAGATCATCAAGTCTGAGATCTTGGATGAGTCTGAAGACTACTC  1388

Query 1371  AGACACCGTGGTGAAGAGGAAGCCTGCTTCTCTGATGGCCCCTCTGAAGCGGAAGGAGGAGTTCTCCTTGTTCA  1444
            ||||||...|||||.||.||||.|.|...|.|||...||.|||||.|||||.||||||||.||||||||.||||
Sbjct 1389  AGACACAAAGGTGAGGAAGAAGACCGTCGCCCTGGGAGCTCCTCTCAAGCGAAAGGAGGAATTCTCCTTATTCA  1462

Query 1445  AGGTGTCTGATGATGAATATAAAGTAACAATCTCGCCTCAGCTGCTCTTGGCCACCCAGCGCTTCCTGTCCCGA  1518
            |||||||||||||||||||||||||||.|||||||||||||||||||.|||||||||||||||||||.||||||
Sbjct 1463  AGGTGTCTGATGATGAATATAAAGTAAAAATCTCGCCTCAGCTGCTCCTGGCCACCCAGCGCTTCCTTTCCCGA  1536

Query 1519  GAAGTGGATGTATTCAGCCCGCTGCGCATCTCTGAGAAGGTCCTGCTGCACCTGTTGAAGCATCCCAGTGTCAA  1592
            ||.||||||||.||||||||..||||..||||||||||.|||.|||||||||||.|||||||||||||||||||
Sbjct 1537  GAGGTGGATGTGTTCAGCCCATTGCGAGTCTCTGAGAAAGTCTTGCTGCACCTGCTGAAGCATCCCAGTGTCAA  1610

Query 1593  CCAGGAAGTGAGGTTTGACGAGAGCAACCGGCTGGCCACACACCACTACCTGTACCAGCGCAGCCAGCCGGTGG  1666
            ||||||.||||.||||||||||||||||||.||||||.|||||||.||.||||||||||||||||||||.||.|
Sbjct 1611  CCAGGAGGTGACGTTTGACGAGAGCAACCGCCTGGCCGCACACCATTATCTGTACCAGCGCAGCCAGCCAGTAG  1684

Query 1667  ATTACTTCATTCTCATCCTGCAGGGCAGGGTTGAAGTGGAGATCGGGAAAGAGGGTCTGAAGTTTGAGAATGGG  1740
            ||||||||||||||||.|||||||||||.||.||.||.||.||.|||||||||||.||||||||.|||||.|||
Sbjct 1685  ATTACTTCATTCTCATTCTGCAGGGCAGAGTCGAGGTCGAAATTGGGAAAGAGGGCCTGAAGTTCGAGAACGGG  1758

Query 1741  GCCTTCACGTACTATGGAGTGTCGGCCCTAACTGTGCCATCCTCGGTTCACCAGTCCCCGGTGTCCTCGCTCCA  1814
            |||||||||||||||||||||||.|||||.||.|..||||||||.|.||||||||||||.|||||.||.|.|||
Sbjct 1759  GCCTTCACGTACTATGGAGTGTCCGCCCTGACAGCCCCATCCTCAGCTCACCAGTCCCCAGTGTCTTCACGCCA  1832

Query 1815  GCCCATCCGCCATGACCTGCAGCCCGACCCAGGTGACGGCACGCATTCATCTG--CGTATTGTCCCGACTACAC  1886
            ||.|||||||||||||.|||||||.||.||||..||.||.||.|..||  |||  |.||.|||||.||||||||
Sbjct 1833  GCTCATCCGCCATGACGTGCAGCCTGAACCAGCCGATGGTACCCGCTC--CTGCACATACTGTCCTGACTACAC  1904

Query 1887  CGTGAGGGCGCTCTCTGATCTGCAGCTCATCAAGGTTACGCGACTGCAGTACCTCAATGCACTCCTGGCTACCC  1960
            .||||||||.||.||.||.|||||||||||.|||||.||.||.|||||||||||.|||||||||||||||||||
Sbjct 1905  TGTGAGGGCCCTTTCCGACCTGCAGCTCATTAAGGTCACACGGCTGCAGTACCTTAATGCACTCCTGGCTACCC  1978

Query 1961  GAGCCCAGAACCTGCCACAGTCCCCTGAGAACACCGACCTGCAGGTTATTCCAGGCAGCCAGACCAGGCTCCTT  2034
            |||||||.|.|.||||.|..|||||.||||||.|.||.||.||||.|||.||||||||||||||||||||||||
Sbjct 1979  GAGCCCAAAGCTTGCCTCCATCCCCAGAGAACGCTGAGCTCCAGGCTATCCCAGGCAGCCAGACCAGGCTCCTT  2052

Query 2035  GGTGAGAAGACCACCACAG-CGGCAGGGTCCAGCCACAGCAGGCCCGGCGTCCCGGTGGAAGGCAGCCCTGGGC  2107
            |||||.|||.||| .|.|| |.||||||||||.|.|||||||.|||.||.||||.|||||.|..||||||||||
Sbjct 2053  GGTGACAAGTCCA-GAGAGACAGCAGGGTCCACCAACAGCAGACCCAGCATCCCAGTGGAGGAGAGCCCTGGGC  2125

Query 2108  GGAACCCAGGCGTT  2121
            ||||||||||.||.
Sbjct 2126  GGAACCCAGGAGTG  2139