Nucleotide Global Alignment
Description
- Query:
- TRCN0000470877
- Subject:
- XR_001738700.2
- Aligned Length:
- 4842
- Identities:
- 1976
- Gaps:
- 2865
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAGCCTTTTCCTTTGGTCACTCACCACCAGCTTACTCATTTTTTTTTTTTTTTGCACATTACCTTCCACACAAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTTTACTTTGTGGCCACAATGTGCATACTTTTTTTGATTGTTACTTTCATGACATAGCAAATTGTTTCTATAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTCTTTATAAAGGTCATTTAAAATGACATGTGCAGTAAGTCAAAGTCTTCTTGTGCTAGGAAATTTGAAAAAAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAAAGTGTAGAGAAAAATACAAAAATTACTGAATCTGAACATCTATAGAGAAGTGTTGTTAGCAGTTGGTTTAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTCCTTCCAATCACATACAGATCATATCTGATGGGTAAAGAATATTCCATACTGTCAACAGACCACACTGTCTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTAAAATCGCTTCAGCAGTGAGGATCCTCTGGAATAGATCTTGTTAATCCTGAGGAATTATTCTCCCAGCGGTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGCTATGAGAAGTGGAATCACCAGATGTAGTAATTCCTGACAGAACTGCCGCCTGCTTGTGTGGCTGAGATGCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GACCTAGGTATCAGGCTGGTCGCGCCGGAACCCAGCACCCACGCTGAGTCTTTCTGAGCTCCACTCTGCTCCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTAGATATTAACCACCTGAGGTAGCTGTCCAGATTCAAGGCGGTAGTGATTTTGTGTGTCTGTGTATTTATCAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGGGTCCGCGGCGGGAACGCAGGGGCTGTGTCCCACGTCCCCAAACCTCTAGTAGGGTACGGCGCGATGAACAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTTCCATAAACCTTAAACCTCCCGGCGCTCAGTCACTGGTTCTTATTTCAGCCCTCTTAGCCCCGTAGGTCGGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCGCTGAAAACCTTTCTGGTACCTGGGGCCTTTCCTAAGAAAAAGGCACATGTCTCGCACATTTCAGTCTGGTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGCAACTTCAGGCGCGCCAGCACCCGAGGTTCTTCCGACCGGCCGCTCCGCTCCCAAGCCGGGAACTTCCCAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAATTGGCTCGGCCTCCGGGCGCGGGGGACAGCATCGGGAGGAGTGGGACTCCGGGCGCCGCGCACGGGCCGAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GACAGCCGGGCTTGGGAGGCCCTGCCCGCCGCCCCGCGTCCTCCCGGCCACTGCCACCCCGCGCATCCGGAGCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCAGCAGACTCGGCGGGGCCCGGAGCCCCACGCCCCCGGCCCGCCCCTGGCCGCCACTTGTTTACTCCCCGGCG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAGCCTAGTCCGACCCTGGGGCCCGCCCCCGCCCACCGCCTATTGGCCGAGGAGGCGCGAAGAGCCGTAACGAT 1258
Query 1 -----------------------------------------------------------------ATGGCGGCG 9
|||||||||
Sbjct 1259 TGGCCCGGGGAGGCGCGGGGCGAGCGGGGTAGGCTGCGCGAGAGGCCGAGAGGGGGCAGCAGGCGATGGCGGCG 1332
Query 10 GCGGTAGCTGCGGCGGGTCGGTTAGGCTGGTTGTTCGCCGCGCTCTGCCTGGGCAACGCCGCGGGGGAGGCCGC 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GCGGTAGCTGCGGCGGGTCGGTTAGGCTGGTTGTTCGCCGCGCTCTGCCTGGGCAACGCCGCGGGGGAGGCCGC 1406
Query 84 GCCGGGCCCGCGAGTGCTGGGCTTCTGCCTGGAGGAGGATGGAGCGGCGGGCGCGGGTTGGGTACGCGGAGGGG 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GCCGGGCCCGCGAGTGCTGGGCTTCTGCCTGGAGGAGGATGGAGCGGCGGGCGCGGGTTGGGTACGCGGAGGGG 1480
Query 158 CGGCGCGGGACACGCCGGACGCCACCTTCCTCCTGCGCCTCTTCGGCCCGGGCTTCGCCAACAGCTCTTGGTCC 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CGGCGCGGGACACGCCGGACGCCACCTTCCTCCTGCGCCTCTTCGGCCCGGGCTTCGCCAACAGCTCTTGGTCC 1554
Query 232 TGGGTGGCCCCGGAGGGGGCGGGCTGCCGGGAGGAGGCGGCCTCCCCCGCGGGCGAGTGGCGCGCGCTGCTGCG 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TGGGTGGCCCCGGAGGGGGCGGGCTGCCGGGAGGAGGCGGCCTCCCCCGCGGGCGAGTGGCGCGCGCTGCTGCG 1628
Query 306 CTTGCGCCTGCGGGCCGAGGCCGTGCGCCCGCACTCGGCGCTGCTGGCGGTGCGCGTGGAGCCGGGTGGCGGGG 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CTTGCGCCTGCGGGCCGAGGCCGTGCGCCCGCACTCGGCGCTGCTGGCGGTGCGCGTGGAGCCGGGTGGCGGGG 1702
Query 380 CGGCTGAGGAGGCGGCGCCGCCCTGGGCTCTGGGCCTGGGGGCGGCCGGGCTGCTGGCGCTGGCAGCGCTGGCG 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CGGCTGAGGAGGCGGCGCCGCCCTGGGCTCTGGGCCTGGGGGCGGCCGGGCTGCTGGCGCTGGCAGCGCTGGCG 1776
Query 454 CGAGGCCTGCAGCTGAGCGCGCTGGCGCTGGCGCCTGCCGAGGTGCAGGTGCTGCGCGAGAGCGGCTCGGAGGC 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CGAGGCCTGCAGCTGAGCGCGCTGGCGCTGGCGCCTGCCGAGGTGCAGGTGCTGCGCGAGAGCGGCTCGGAGGC 1850
Query 528 GGAGCGTGCGGCGGCGCGGCGTTTGGAGCCCGCGCGGCGCTGGGCCGGCTGCGCCTTGGGCGCGCTGCTGCTGC 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GGAGCGTGCGGCGGCGCGGCGTTTGGAGCCCGCGCGGCGCTGGGCCGGCTGCGCCTTGGGCGCGCTGCTGCTGC 1924
Query 602 TGGCCAGCCTGGCGCAGGCGGCGCTGGCGGTGCTGCTGTACCGCGCGGCCGGCCAGCGTGCGGTGCCCGCCGTG 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 TGGCCAGCCTGGCGCAGGCGGCGCTGGCGGTGCTGCTGTACCGCGCGGCCGGCCAGCGTGCGGTGCCCGCCGTG 1998
Query 676 TTGGGCAGCGCGGGGCTCGTGTTCCTGGTGGGAGAGGTGGTGCCGGCCGCCGTGAGCGGGCGCTGGACGCTGGC 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 TTGGGCAGCGCGGGGCTCGTGTTCCTGGTGGGAGAGGTGGTGCCGGCCGCCGTGAGCGGGCGCTGGACGCTGGC 2072
Query 750 GCTGGCGCCGCGAGCGCTCGGCCTCAGCCGCCTGGCCGTCCTGCTCACTCTGCCCGTCGCGCTGCCCGTGGGGC 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GCTGGCGCCGCGAGCGCTCGGCCTCAGCCGCCTGGCCGTCCTGCTCACTCTGCCCGTCGCGCTGCCCGTGGGGC 2146
Query 824 AGCTGCTGGAGCTGGCGGCGCGGCCCGGGCGGCTGCGGGAGCGGGTGCTGGAGCTGGCGCGCGGCGGCGGTGAC 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct 2147 AGCTGCTGGAGCTGGCGGCGCGGCCCGGGCGGCTGCGGGAGCGGGTGCTGGAGCTGGCGCGCGGCGGCGGCGAC 2220
Query 898 CCCTACAGCGATCTCAGCAAGGGCGTGCTGCGCTGCCGGACCGTGGAGGACGTGCTCACGCCCCTCGAAGACTG 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 CCCTACAGCGATCTCAGCAAGGGCGTGCTGCGCTGCCGGACCGTGGAGGACGTGCTCACGCCCCTCGAAGACTG 2294
Query 972 CTTCATGCTGGACGCCAGCACCGTGCTGGACTTCGGCGTCCTGGCCAGCATCATGCAGAGCGGCCACACGCGCA 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CTTCATGCTGGACGCCAGCACCGTGCTGGACTTCGGCGTCCTGGCCAGCATCATGCAGAGCGGCCACACGCGCA 2368
Query 1046 TCCCGGTGTACGAGGAGGAGCGCTCCAACATCGTGGACATGCTCTACCTCAAGGACTTGGCCTTCGTGGATCCC 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TCCCGGTGTACGAGGAGGAGCGCTCCAACATCGTGGACATGCTCTACCTCAAGGACTTGGCCTTCGTGGATCCC 2442
Query 1120 GAAGACTGCACGCCGCTCAGCACCATCACTCGTTTCTACAACCATCCGCTCCACTTCGTCTTCAACGACACCAA 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 GAAGACTGCACGCCGCTCAGCACCATCACTCGTTTCTACAACCATCCGCTCCACTTCGTCTTCAACGACACCAA 2516
Query 1194 GCTGGACGCTGTCCTGGAGGAATTCAAGCGAGGGAAGTCCCACCTGGCCATCGTGCAGAAGGTGAACAACGAGG 1267
||||||||||||||||||||||||||||||||
Sbjct 2517 GCTGGACGCTGTCCTGGAGGAATTCAAGCGAG------------------------------------------ 2548
Query 1268 GTGAAGGCGACCCCTTCTACGAGGTCCTGGGCCTGGTCACCCTGGAGGACGTGATCGAGGAGATCATCAGGTCC 1341
Sbjct 2549 -------------------------------------------------------------------------- 2548
Query 1342 GAGATCCTGGACGAGTCTGAAGACTACCGAGACACCGTGGTGAAGAGGAAGCCTGCTTCTCTGATGGCCCCTCT 1415
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2549 ----------------------------GAGACACCGTGGTGAAGAGGAAGCCTGCTTCTCTGATGGCCCCTCT 2594
Query 1416 GAAGCGGAAGGAGGAGTTCTCCTTGTTCAAGGTGTCTGATGATGAATATAAAGTAACAATCTCGCCTCAGCTGC 1489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2595 GAAGCGGAAGGAGGAGTTCTCCTTGTTCAAGGTGTCTGATGATGAATATAAAGTAACAATCTCGCCTCAGCTGC 2668
Query 1490 TCTTGGCCACCCAGCGCTTCCTGTCCCGAGAAGTGGATGTATTCAGCCCGCTGCGCATCTCTGAGAAGGTCCTG 1563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2669 TCTTGGCCACCCAGCGCTTCCTGTCCCGAGAAGTGGATGTATTCAGCCCGCTGCGCATCTCTGAGAAGGTCCTG 2742
Query 1564 CTGCACCTGTTGAAGCATCCCAGTGTCAACCAGGAAGTGAGGTTTGACGAGAGCAACCGGCTGGCCACACACCA 1637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2743 CTGCACCTGTTGAAGCATCCCAGTGTCAACCAGGAAGTGAGGTTTGACGAGAGCAACCGGCTGGCCACACACCA 2816
Query 1638 CTACCTGTACCAGCGCAGCCAGCCGGTGGATTACTTCATTCTCATCCTGCAGGGCAGGGTTGAAGTGGAGATCG 1711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2817 CTACCTGTACCAGCGCAGCCAGCCGGTGGATTACTTCATTCTCATCCTGCAGGGCAGGGTTGAAGTGGAGATCG 2890
Query 1712 GGAAAGAGGGTCTGAAGTTTGAGAATGGGGCCTTCACGTACTATGGAGTGTCGGCCCTAACTGTGCCATCCTCG 1785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2891 GGAAAGAGGGTCTGAAGTTTGAGAATGGGGCCTTCACGTACTATGGAGTGTCGGCCCTAACTGTGCCATCCTCG 2964
Query 1786 GTTCACCAGTCCCCGGTGTCCTCGCTCCAGCCCATCCGCCATGACCTGCAGCCCGACCCAGGTGACGGCACGCA 1859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2965 GTTCACCAGTCCCCGGTGTCCTCGCTCCAGCCCATCCGCCATGACCTGCAGCCCGACCCAGGTGACGGCACGCA 3038
Query 1860 TTCATCTGCGTATTGTCCCGACTACACCGTGAGGGCGCTCTCTGATCTGCAGCTCATCAAGGTTACGCGACTGC 1933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3039 TTCATCTGCGTATTGTCCCGACTACACCGTGAGGGCGCTCTCTGATCTGCAGCTCATCAAGGTTACGCGACTGC 3112
Query 1934 AGTACCTCAATGCACTCCTGGCTACCCGAGCCCAGAACCTGCCACAGTCCCCTGAGAACACCGACCTGCAGGTT 2007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3113 AGTACCTCAATGCACTCCTGGCTACCCGAGCCCAGAACCTGCCACAGTCCCCTGAGAACACCGACCTGCAGGTT 3186
Query 2008 ATTCCAGGCAGCCAGACCAGGCTCCTTGGTGAGAAGACCACCACAGCGGC------------------------ 2057
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3187 ATTCCAGGCAGCCAGACCAGGCTCCTTGGTGAGAAGACCACCACAGCGGCAGCCTTCCCAGTAGACCTTTCCCT 3260
Query 2058 -------------------------------------------------------------------------- 2057
Sbjct 3261 CTTTGGCACAGTTGGAAACTGCAGTTGATAAATGACTGTGGACTAGTGCGCGTTTTTTGTTTTCAGAGCACACG 3334
Query 2058 --AGGGTCCAGCCACAGCAGGCCCGGCGTCCCGGTGGAAGGCAGCCCTGGGCGGAACCCAGGCGTT-------- 2121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3335 TAAGGGTCCAGCCACAGCAGGCCCGGCGTCCCGGTGGAAGGCAGCCCTGGGCGGAACCCAGGCGTTTAACGGCT 3408
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 3409 CACTAGGCAGCCCCAGATCTGGGGAACAGATGAGCACGTGGGGAGCTGGAGTGAGCTGAGCAGAAGTTTTGTGC 3482
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 3483 CCGCCTGCCCCCATCCCCTCCAGGCCACGTTTTAGATGGCCCTTGTAGTTGCGGGTCCTGGGTGTCCTCAGAAC 3556
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 3557 TAGACATCAATGCCTGGATCCTTCAGCCGGCCCTGCCCTCCTTTAGGAGACAGGAGTCACCAGGGCACAGCCCT 3630
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 3631 CCAGGCCCGCCTCAGGAAGGAATGAAAGGAATGCCATCATCTCTAGTTCCCAGGGCCCAGCCTTCCCCTTCTCC 3704
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 3705 CCCGGGGCAGGGACAGTGCGGCATATTCAGATTCAGACCTCTTTGGGCTGAGCCACCTTGTGAGTGCAGTTACT 3778
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 3779 GCCTTTGTGTGGCCGTGACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGCTGGCAGCACTTTTTGA 3852
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 3853 GCAAGCCGAGAGCACCCATTTTGGCTGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTCCTTTCTGGCTTCCC 3926
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 3927 TGATGGTGTCATGTTTCAGCGCATGCGCCCCAGCCTTTCCCATGTGCCAAACCAGAAGCTCCACTGCCCGTAGG 4000
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 4001 CTGTCCCTGTAGCCCTGCTCCCTCCCTGGAGGCTGCTCTTCTGATTCTGAGAGCTGGCCTAGTGGTGCTGAGGG 4074
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 4075 CCCCTTTCTGCTTCTCTGCCCACCTGCTGAGTTGCCACTCGCAGTGTTGTCAGTTCCCGTGTTCTGAGAAGAGG 4148
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 4149 TCATGCCTGGGAGGAAGGGATCGTCATGCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCT 4222
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 4223 GCCTGTTGCACCTGCTCCACACCTCCCCACAGCCTCCCTGCAGGTGCTGTGTGGCCGTGATGTGCAGAGAGCAG 4296
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 4297 TGAGGGAGGGTTCATGAACCAGGTGGATCCTCTTTAAAAAAAAAAAAGTTTTTGTTATATCTCTAGAACATTTC 4370
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 4371 AAGTCTTTTCCTTTTTTTCTGTTCCTAGCTATGGGGTTTTAGAGAAGTGGGAACAGGAAGGCATTTGTCTTTTT 4444
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 4445 CTTCTAGTTTACTACATTTTCCTTCCGTAGTTCTTCAGCTGTGTGGAAACGGGCATCACAAGGACATAGGATCA 4518
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 4519 TAGATTGGGTAGGGAGGGAGGAGGATTTCTGGAACTTTTCTCAAAGGAATTTGGACCCTTATAAATGGGACTGA 4592
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 4593 AGGTCAAAACAACAGTGATATCCTTGCTTAGAAATTGTCCTCAAGGAATAAACTCTGAGAGCAAGCCCGGGTTG 4666
Query 2122 -------------------------------- 2121
Sbjct 4667 GAAACAGATGCTTTAAAATCCTCTCTCCAGAA 4698
