Nucleotide Global Alignment
Description
- Query:
- TRCN0000470877
- Subject:
- XR_244887.5
- Aligned Length:
- 4839
- Identities:
- 2120
- Gaps:
- 2718
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCTTTTCCTTTGGTCACTCACCACCAGCTTACTCATTTTTTTTTTTTTTTGCACATTACCTTCCACACAAGTTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TACTTTGTGGCCACAATGTGCATACTTTTTTTGATTGTTACTTTCATGACATAGCAAATTGTTTCTATAGAGTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTTATAAAGGTCATTTAAAATGACATGTGCAGTAAGTCAAAGTCTTCTTGTGCTAGGAAATTTGAAAAAACAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGTGTAGAGAAAAATACAAAAATTACTGAATCTGAACATCTATAGAGAAGTGTTGTTAGCAGTTGGTTTATTTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTCCAATCACATACAGATCATATCTGATGGGTAAAGAATATTCCATACTGTCAACAGACCACACTGTCTTCTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAATCGCTTCAGCAGTGAGGATCCTCTGGAATAGATCTTGTTAATCCTGAGGAATTATTCTCCCAGCGGTGAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TATGAGAAGTGGAATCACCAGATGTAGTAATTCCTGACAGAACTGCCGCCTGCTTGTGTGGCTGAGATGCTGAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTAGGTATCAGGCTGGTCGCGCCGGAACCCAGCACCCACGCTGAGTCTTTCTGAGCTCCACTCTGCTCCTGTTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GATATTAACCACCTGAGGTAGCTGTCCAGATTCAAGGCGGTAGTGATTTTGTGTGTCTGTGTATTTATCACGGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTCCGCGGCGGGAACGCAGGGGCTGTGTCCCACGTCCCCAAACCTCTAGTAGGGTACGGCGCGATGAACATCTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCATAAACCTTAAACCTCCCGGCGCTCAGTCACTGGTTCTTATTTCAGCCCTCTTAGCCCCGTAGGTCGGCGCG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTGAAAACCTTTCTGGTACCTGGGGCCTTTCCTAAGAAAAAGGCACATGTCTCGCACATTTCAGTCTGGTCTGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AACTTCAGGCGCGCCAGCACCCGAGGTTCTTCCGACCGGCCGCTCCGCTCCCAAGCCGGGAACTTCCCAGAGAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTGGCTCGGCCTCCGGGCGCGGGGGACAGCATCGGGAGGAGTGGGACTCCGGGCGCCGCGCACGGGCCGAGGAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGCCGGGCTTGGGAGGCCCTGCCCGCCGCCCCGCGTCCTCCCGGCCACTGCCACCCCGCGCATCCGGAGCCGCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCAGACTCGGCGGGGCCCGGAGCCCCACGCCCCCGGCCCGCCCCTGGCCGCCACTTGTTTACTCCCCGGCGCAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCTAGTCCGACCCTGGGGCCCGCCCCCGCCCACCGCCTATTGGCCGAGGAGGCGCGAAGAGCCGTAACGATTGG 1258
Query 1 --------------------------------------------------------------ATGGCGGCGGCG 12
||||||||||||
Sbjct 1259 CCCGGGGAGGCGCGGGGCGAGCGGGGTAGGCTGCGCGAGAGGCCGAGAGGGGGCAGCAGGCGATGGCGGCGGCG 1332
Query 13 GTAGCTGCGGCGGGTCGGTTAGGCTGGTTGTTCGCCGCGCTCTGCCTGGGCAACGCCGCGGGGGAGGCCGCGCC 86
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GTAGCTGCGGCGGGTCGGTTAGGCTGGTTGTTCGCCGCGCTCTGCCTGGGCAACGCCGCGGGGGAGGCCGCGCC 1406
Query 87 GGGCCCGCGAGTGCTGGGCTTCTGCCTGGAGGAGGATGGAGCGGCGGGCGCGGGTTGGGTACGCGGAGGGGCGG 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GGGCCCGCGAGTGCTGGGCTTCTGCCTGGAGGAGGATGGAGCGGCGGGCGCGGGTTGGGTACGCGGAGGGGCGG 1480
Query 161 CGCGGGACACGCCGGACGCCACCTTCCTCCTGCGCCTCTTCGGCCCGGGCTTCGCCAACAGCTCTTGGTCCTGG 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CGCGGGACACGCCGGACGCCACCTTCCTCCTGCGCCTCTTCGGCCCGGGCTTCGCCAACAGCTCTTGGTCCTGG 1554
Query 235 GTGGCCCCGGAGGGGGCGGGCTGCCGGGAGGAGGCGGCCTCCCCCGCGGGCGAGTGGCGCGCGCTGCTGCGCTT 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GTGGCCCCGGAGGGGGCGGGCTGCCGGGAGGAGGCGGCCTCCCCCGCGGGCGAGTGGCGCGCGCTGCTGCGCTT 1628
Query 309 GCGCCTGCGGGCCGAGGCCGTGCGCCCGCACTCGGCGCTGCTGGCGGTGCGCGTGGAGCCGGGTGGCGGGGCGG 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GCGCCTGCGGGCCGAGGCCGTGCGCCCGCACTCGGCGCTGCTGGCGGTGCGCGTGGAGCCGGGTGGCGGGGCGG 1702
Query 383 CTGAGGAGGCGGCGCCGCCCTGGGCTCTGGGCCTGGGGGCGGCCGGGCTGCTGGCGCTGGCAGCGCTGGCGCGA 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CTGAGGAGGCGGCGCCGCCCTGGGCTCTGGGCCTGGGGGCGGCCGGGCTGCTGGCGCTGGCAGCGCTGGCGCGA 1776
Query 457 GGCCTGCAGCTGAGCGCGCTGGCGCTGGCGCCTGCCGAGGTGCAGGTGCTGCGCGAGAGCGGCTCGGAGGCGGA 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GGCCTGCAGCTGAGCGCGCTGGCGCTGGCGCCTGCCGAGGTGCAGGTGCTGCGCGAGAGCGGCTCGGAGGCGGA 1850
Query 531 GCGTGCGGCGGCGCGGCGTTTGGAGCCCGCGCGGCGCTGGGCCGGCTGCGCCTTGGGCGCGCTGCTGCTGCTGG 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GCGTGCGGCGGCGCGGCGTTTGGAGCCCGCGCGGCGCTGGGCCGGCTGCGCCTTGGGCGCGCTGCTGCTGCTGG 1924
Query 605 CCAGCCTGGCGCAGGCGGCGCTGGCGGTGCTGCTGTACCGCGCGGCCGGCCAGCGTGCGGTGCCCGCCGTGTTG 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CCAGCCTGGCGCAGGCGGCGCTGGCGGTGCTGCTGTACCGCGCGGCCGGCCAGCGTGCGGTGCCCGCCGTGTTG 1998
Query 679 GGCAGCGCGGGGCTCGTGTTCCTGGTGGGAGAGGTGGTGCCGGCCGCCGTGAGCGGGCGCTGGACGCTGGCGCT 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GGCAGCGCGGGGCTCGTGTTCCTGGTGGGAGAGGTGGTGCCGGCCGCCGTGAGCGGGCGCTGGACGCTGGCGCT 2072
Query 753 GGCGCCGCGAGCGCTCGGCCTCAGCCGCCTGGCCGTCCTGCTCACTCTGCCCGTCGCGCTGCCCGTGGGGCAGC 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GGCGCCGCGAGCGCTCGGCCTCAGCCGCCTGGCCGTCCTGCTCACTCTGCCCGTCGCGCTGCCCGTGGGGCAGC 2146
Query 827 TGCTGGAGCTGGCGGCGCGGCCCGGGCGGCTGCGGGAGCGGGTGCTGGAGCTGGCGCGCGGCGGCGGTGACCCC 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 2147 TGCTGGAGCTGGCGGCGCGGCCCGGGCGGCTGCGGGAGCGGGTGCTGGAGCTGGCGCGCGGCGGCGGCGACCCC 2220
Query 901 TACAGCGATCTCAGCAAGGGCGTGCTGCGCTGCCGGACCGTGGAGGACGTGCTCACGCCCCTCGAAGACTGCTT 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 TACAGCGATCTCAGCAAGGGCGTGCTGCGCTGCCGGACCGTGGAGGACGTGCTCACGCCCCTCGAAGACTGCTT 2294
Query 975 CATGCTGGACGCCAGCACCGTGCTGGACTTCGGCGTCCTGGCCAGCATCATGCAGAGCGGCCACACGCGCATCC 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CATGCTGGACGCCAGCACCGTGCTGGACTTCGGCGTCCTGGCCAGCATCATGCAGAGCGGCCACACGCGCATCC 2368
Query 1049 CGGTGTACGAGGAGGAGCGCTCCAACATCGTGGACATGCTCTACCTCAAGGACTTGGCCTTCGTGGATCCCGAA 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 CGGTGTACGAGGAGGAGCGCTCCAACATCGTGGACATGCTCTACCTCAAGGACTTGGCCTTCGTGGATCCCGAA 2442
Query 1123 GACTGCACGCCGCTCAGCACCATCACTCGTTTCTACAACCATCCGCTCCACTTCGTCTTCAACGACACCAAGCT 1196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 GACTGCACGCCGCTCAGCACCATCACTCGTTTCTACAACCATCCGCTCCACTTCGTCTTCAACGACACCAAGCT 2516
Query 1197 GGACGCTGTCCTGGAGGAATTCAAGCGAGGGAAGTCCCACCTGGCCATCGTGCAGAAGGTGAACAACGAGGGTG 1270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 GGACGCTGTCCTGGAGGAATTCAAGCGAGGGAAGTCCCACCTGGCCATCGTGCAGAAGGTGAACAACGAGGGTG 2590
Query 1271 AAGGCGACCCCTTCTACGAGGTCCTGGGCCTGGTCACCCTGGAGGACGTGATCGAGGAGATCATCAGGTCCGAG 1344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 AAGGCGACCCCTTCTACGAGGTCCTGGGCCTGGTCACCCTGGAGGACGTGATCGAGGAGATCATCAGGTCCGAG 2664
Query 1345 ATCCTGGACGAGTCTGAAGACTACCGAGACACCGTGGTGAAGAGGAAGCCTGCTTCTCTGATGGCCCCTCTGAA 1418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 ATCCTGGACGAGTCTGAAGACTACCGAGACACCGTGGTGAAGAGGAAGCCTGCTTCTCTGATGGCCCCTCTGAA 2738
Query 1419 GCGGAAGGAGGAGTTCTCCTTGTTCAAGGTGTCTGATGATGAATATAAAGTAACAATCTCGCCTCAGCTGCTCT 1492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 GCGGAAGGAGGAGTTCTCCTTGTTCAAGGTGTCTGATGATGAATATAAAGTAACAATCTCGCCTCAGCTGCTCT 2812
Query 1493 TGGCCACCCAGCGCTTCCTGTCCCGAGAAGTGGATGTATTCAGCCCGCTGCGCATCTCTGAGAAGGTCCTGCTG 1566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 TGGCCACCCAGCGCTTCCTGTCCCGAGAAGTGGATGTATTCAGCCCGCTGCGCATCTCTGAGAAGGTCCTGCTG 2886
Query 1567 CACCTGTTGAAGCATCCCAGTGTCAACCAGGAAGTGAGGTTTGACGAGAGCAACCGGCTGGCCACACACCACTA 1640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 CACCTGTTGAAGCATCCCAGTGTCAACCAGGAAGTGAGGTTTGACGAGAGCAACCGGCTGGCCACACACCACTA 2960
Query 1641 CCTGTACCAGCGCAGCCAGCCGGTGGATTACTTCATTCTCATCCTGCAGGGCAGGGTTGAAGTGGAGATCGGGA 1714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 CCTGTACCAGCGCAGCCAGCCGGTGGATTACTTCATTCTCATCCTGCAGGGCAGGGTTGAAGTGGAGATCGGGA 3034
Query 1715 AAGAGGGTCTGAAGTTTGAGAATGGGGCCTTCACGTACTATGGAGTGTCGGCCCTAACTGTGCCATCCTCGGTT 1788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 AAGAGGGTCTGAAGTTTGAGAATGGGGCCTTCACGTACTATGGAGTGTCGGCCCTAACTGTGCCATCCTCGGTT 3108
Query 1789 CACCAGTCCCCGGTGTCCTCGCTCCAGCCCATCCGCCATGACCTGCAGCCCGACCCAGGTGACGGCACGCATTC 1862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 CACCAGTCCCCGGTGTCCTCGCTCCAGCCCATCCGCCATGACCTGCAGCCCGACCCAGGTGACGGCACGCATTC 3182
Query 1863 ATCTGCGTATTGTCCCGACTACACCGTGAGGGCGCTCTCTGATCTGCAGCTCATCAAGGTTACGCGACTGCAGT 1936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 ATCTGCGTATTGTCCCGACTACACCGTGAGGGCGCTCTCTGATCTGCAGCTCATCAAGGTTACGCGACTGCAGT 3256
Query 1937 ACCTCAATGCACTCCTGGCTACCCGAGCCCAGAACCTGCCACAGTCCCCTGAGAACACCGACCTGCAGGTTATT 2010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 ACCTCAATGCACTCCTGGCTACCCGAGCCCAGAACCTGCCACAGTCCCCTGAGAACACCGACCTGCAGGTTATT 3330
Query 2011 CCAGGCAGCCAGACCAGGCTCCTTGGTGAGAAGACCACCACAGCGGC--------------------------- 2057
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 CCAGGCAGCCAGACCAGGCTCCTTGGTGAGAAGACCACCACAGCGGCAGCCTTCCCAGTAGACCTTTCCCTCTT 3404
Query 2058 -------------------------------------------------------------------------A 2058
|
Sbjct 3405 TGGCACAGTTGGAAACTGCAGTTGATAAATGACTGTGGACTAGTGCGCGTTTTTTGTTTTCAGAGCACACGTAA 3478
Query 2059 GGGTCCAGCCACAGCAGGCCCGGCGTCCCGGTGGAAGGCAGCCCTGGGCGGAACCCAGGCGTT----------- 2121
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 GGGTCCAGCCACAGCAGGCCCGGCGTCCCGGTGGAAGGCAGCCCTGGGCGGAACCCAGGCGTTTAACGGCTCAC 3552
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 3553 TAGGCAGCCCCAGATCTGGGGAACAGATGAGCACGTGGGGAGCTGGAGTGAGCTGAGCAGAAGTTTTGTGCCCG 3626
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 3627 CCTGCCCCCATCCCCTCCAGGCCACGTTTTAGATGGCCCTTGTAGTTGCGGGTCCTGGGTGTCCTCAGAACTAG 3700
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 3701 ACATCAATGCCTGGATCCTTCAGCCGGCCCTGCCCTCCTTTAGGAGACAGGAGTCACCAGGGCACAGCCCTCCA 3774
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 3775 GGCCCGCCTCAGGAAGGAATGAAAGGAATGCCATCATCTCTAGTTCCCAGGGCCCAGCCTTCCCCTTCTCCCCC 3848
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 3849 GGGGCAGGGACAGTGCGGCATATTCAGATTCAGACCTCTTTGGGCTGAGCCACCTTGTGAGTGCAGTTACTGCC 3922
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 3923 TTTGTGTGGCCGTGACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGCTGGCAGCACTTTTTGAGCA 3996
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 3997 AGCCGAGAGCACCCATTTTGGCTGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTCCTTTCTGGCTTCCCTGA 4070
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 4071 TGGTGTCATGTTTCAGCGCATGCGCCCCAGCCTTTCCCATGTGCCAAACCAGAAGCTCCACTGCCCGTAGGCTG 4144
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 4145 TCCCTGTAGCCCTGCTCCCTCCCTGGAGGCTGCTCTTCTGATTCTGAGAGCTGGCCTAGTGGTGCTGAGGGCCC 4218
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 4219 CTTTCTGCTTCTCTGCCCACCTGCTGAGTTGCCACTCGCAGTGTTGTCAGTTCCCGTGTTCTGAGAAGAGGTCA 4292
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 4293 TGCCTGGGAGGAAGGGATCGTCATGCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCC 4366
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 4367 TGTTGCACCTGCTCCACACCTCCCCACAGCCTCCCTGCAGGTGCTGTGTGGCCGTGATGTGCAGAGAGCAGTGA 4440
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 4441 GGGAGGGTTCATGAACCAGGTGGATCCTCTTTAAAAAAAAAAAAGTTTTTGTTATATCTCTAGAACATTTCAAG 4514
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 4515 TCTTTTCCTTTTTTTCTGTTCCTAGCTATGGGGTTTTAGAGAAGTGGGAACAGGAAGGCATTTGTCTTTTTCTT 4588
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 4589 CTAGTTTACTACATTTTCCTTCCGTAGTTCTTCAGCTGTGTGGAAACGGGCATCACAAGGACATAGGATCATAG 4662
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 4663 ATTGGGTAGGGAGGGAGGAGGATTTCTGGAACTTTTCTCAAAGGAATTTGGACCCTTATAAATGGGACTGAAGG 4736
Query 2122 -------------------------------------------------------------------------- 2121
Sbjct 4737 TCAAAACAACAGTGATATCCTTGCTTAGAAATTGTCCTCAAGGAATAAACTCTGAGAGCAAGCCCGGGTTGGAA 4810
Query 2122 ----------------------------- 2121
Sbjct 4811 ACAGATGCTTTAAAATCCTCTCTCCAGAA 4839
