Nucleotide Global Alignment
Description
- Query:
- TRCN0000471000
- Subject:
- NR_148043.2
- Aligned Length:
- 2993
- Identities:
- 716
- Gaps:
- 2234
Alignment
Query 1 ----------------------------ATGGCCCTGGAGGCGGCGGGAGGGCCGCCGGAGGAAACGCTGTCAC 46
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GTGCGGAAGGGGTGCCCGGGACGAAGCCATGGCCCTGGAGGCGGCGGGAGGGCCGCCGGAGGAAACGCTGTCAC 74
Query 47 TGTGGAAAC----------------------------------------------------------------- 55
|||||||||
Sbjct 75 TGTGGAAACGGTAATGCTGTCAGGCGACGCGCAGGAGGCGGGGGCCGAGGCCGGGCGGCCCTTCGCGGACCCTC 148
Query 56 -------------------------------------------------------------------------- 55
Sbjct 149 CGAGCTCATAGTCTTCAGGCTGTGGAATCGGAGCTGCCACCGCCCGAGACTCCAAAGCAAAGCCCAGTTTCCGG 222
Query 56 -------------------------------------------------------------------------- 55
Sbjct 223 CGCGGAAGCGGAGGGATCTCAGGAATTGTAGTCCGCGGGGTGGGCGCGGTTCTCGCTTCCGGCCAGTTTGTCTG 296
Query 56 -------------------------------------------------------------------------- 55
Sbjct 297 GCCTGCGCTTGCGCGGGTCTCCGCCGCCTGGGCTCCTAGGGACTGTGGCCTCGGCGGTATGTCCCTTGCTTTCC 370
Query 56 -------------------------------------------------------------------------- 55
Sbjct 371 CTTGAAGCGGGAGAAGACCCGGCAGAGGCGCTCTGTCCGCTGCAGCCGCGCGGGTGGAGGAGGCAGAGTCTGAG 444
Query 56 --------------------------------------GGGAGCAAGCTCGGCTGAAGGCCCACGTCGTAGACC 91
||||||||||||||||||||||||||||||||||||
Sbjct 445 GTGTGACCCCGACCAAGTTTGACGCTTCTGTCCTCCTAGGGAGCAAGCTCGGCTGAAGGCCCACGTCGTAGACC 518
Query 92 GGGACACCGAGGCGTGGCAGCGAGACCCCGCCTTCTCGGGTCTGCAGAGGGTCGGGGGCGTTGACGTGTCCTTC 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GGGACACCGAGGCGTGGCAGCGAGACCCCGCCTTCTCGGGTCTGCAGAGGGTCGGGGGCGTTGACGTGTCCTTC 592
Query 166 GTGAAAGGGGACAGTGTCCGCGCTTGTGCTTCCCTGGTGGTGCTCAGCTTCCCTGAGCTCGAGGTCCTTCTTGT 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTGAAAGGGGACAGTGTCCGCGCTTGTGCTTCCCTGGTGGTGCTCAGCTTCCCTGAGCTCGAGGTCCTTCTTGT 666
Query 240 GGATGGAAACGGGGTACTCCACCACCGAGGCTTTGGGGTGGCCTGCCACCTTGGCGTCCTTACAGACCTGCCGT 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGATGGAAACGGGGTACTCCACCACCGAGGCTTTGGGGTGGCCTGCCACCTTGGCGTCCTTACAGACCTGCCGT 740
Query 314 GTGTTGGGGTGGCCAAGAAACTTCTGCAGGTGGATGGGCTGGAGAACAACGCCCTGCACAAGGAGAAGATCCGA 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GTGTTGGGGTGGCCAAGAAACTTCTGCAGGTGGATGGGCTGGAGAACAACGCCCTGCACAAGGAGAAGATCCGA 814
Query 388 CTCCTGCAGACTCGAGGAGACTCATTCCCTCTGCTGGGAGACTCTGGGACTGTCCTGGGAATGGCCCTGAGGAG 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTCCTGCAGACTCGAGGAGACTCATTCCCTCTGCTGGGAGACTCTGGGACTGTCCTGGGAATGGCCCTGAGGAG 888
Query 462 CCACGACCGCAGCACCAGGCCCCTCTACATCTCCGTGGGCCACAGGATGAGCCTGGAGGCCGCTGTGCGCCTGA 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CCACGACCGCAGCACCAGGCCCCTCTACATCTCCGTGGGCCACAGGATGAGCCTGGAGGCCGCTGTGCGCCTGA 962
Query 536 CTTGCTGCTGCTGCAGGTTCCGGATCCCAGAGCCCGTGCGCCAG------GCTGACATCTGCTCCCGAGAGCAC 603
|||||||||||||||||||||||||||||||||||||||||||| |.||| |..||.|...||||||||
Sbjct 963 CTTGCTGCTGCTGCAGGTTCCGGATCCCAGAGCCCGTGCGCCAGCACTTTGTTGA-ACGTGGTGGTGAGAGCAC 1035
Query 604 A--TCCGC----------------AAGTCGCTGG-----------------GACTC---CCCGGGCCACC---- 635
| |||.| ||..||.||| |.||| ||.|..|.|.|
Sbjct 1036 ACGTCCTCGTCTCATTCCTGATCGAACGCGGTGGTGAGAGCACACGTCCTCGTCTCGTTCCTGATCGAACGCGG 1109
Query 636 ---------CACACCGAGGAGCC----------------CGAAGGCGCAGAGGCCAGTGGCATGCCCCAAAGGA 684
||||| |.|| ||||.||| |||| || |.||.|
Sbjct 1110 TGGTGAGAGCACAC-----ATCCTCGTCTCGTTCCTGATCGAACGCG---------GTGG--TG----AGAGCA 1163
Query 685 GACTCCGGAGAGTCCTC-----------------------AGGTGAGGGC-CA-GCCC----------CC---- 719
.|| |||||| .||||||.|| || |.|| ||
Sbjct 1164 CAC--------GTCCTCGTCTCGTTCCTGATCGAACGTGGTGGTGAGAGCACACGTCCTTGTCTTGTTCCTGAT 1229
Query 720 ---ACAGGACC----ACAGCC---CAGGCCCC--------AGGACAGC---------CCCAAGGCCAGGCTC-- 764
|..|||.| .|||.| || ||.| |.|..||| ..||||| |.||||
Sbjct 1230 CTTAAGGGAACGTTTGCAGTCTTTCA--CCACTAGATGTGATGTGAGCTGTTAGATTTTCAAGG--ATGCTCTT 1299
Query 765 ---CCAGGAGCAGGCGGGC-------------------------------------AAGG--ACTGG------- 789
||||..|.||.|||.| |||| |||||
Sbjct 1300 CATCCAGCTGAAGACGGTCCCTTCTAGTCCTAATTTGTTAAGTGTTTTTATCCTTAAAGGGTACTGGATTTTGT 1373
Query 790 CAG----------------------------------------------------------------------- 792
||.
Sbjct 1374 CAAATGCTTTTCTGGCCTCTATTGAAAAGATCCTGTGTTCTTCTGTGAATATGAGGTGTTACATTGATTGATTT 1447
Query 793 -------------------------------------------------------------------------- 792
Sbjct 1448 TCATATGTTGAGCCAGTTTCCATTTGTGGAATACATCTAACTCGGTCATGGTGTATAATCCATTTACTCTGCTG 1521
Query 793 -------------------------------------------------------------------------- 792
Sbjct 1522 CTGAATGTGATTTGCTTGTATTTTGGTGCGGATTTTTACATCTGTATTTATAAGGGATATTGGTCTGGTGTTTT 1595
Query 793 -------------------------------------------------------------------------- 792
Sbjct 1596 CTTATGATGTCTTCCTTTGGTTTTGATATCAGGATAATATTAGCCTCATAGATTGGGTTAGGAAATGTTCTCTC 1669
Query 793 -------------------------------------------------------------------------- 792
Sbjct 1670 CTCCGTTTTTTTTGGAAGAGAGAGATTGGTGTTAATTCTTGCTAGAACCTTTGGTAGAATTTGCCAGTAAGCCT 1743
Query 793 -------------------------------------------------------------------------- 792
Sbjct 1744 ATCTGGTCTTGGGTCTTTGGGAGGATTTTGATTCGATTCAATCTATGTATTTGTTATAGATCGTTCGGATTGTC 1817
Query 793 -------------------------------------------------------------------------- 792
Sbjct 1818 CATCCTTGAGTCAGTTGCTAGCTTGTGTGTTTCTTGGAGTTTTTCCGTTTCGTCCATGTTATCTCATCTGTTGG 1891
Query 793 -------------------------------------------------------------------------- 792
Sbjct 1892 CATACCGTCGTTCACGGGATTTTATTGATGTGTGTGAGGTCTCTGAGAACGTCCCTGCCTTCACTCCTGCTTTT 1965
Query 793 -------------------------------------------------------------------------- 792
Sbjct 1966 AGTCACTGGCATCTTCTTTTAACTTGGGCCATCTGGCCGTGCATGGTTTTGGGAGAGTCCTCCTTGACTCTGCA 2039
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2040 GATGCTGAGCAGTGATCTGGCTGGGAAAGGGGACCAGGAGTGCAGGGCACCTGCTGAGGACTCACCTAAGCCCA 2113
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2114 AGAGTCAGAGAGTCGGAGCTCCAACCACATCTGCCTGCATGCCTTTCCCAGGCTCTCCCCAGGCGGACAGCCAG 2187
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2188 CACCCCCTCCCCAAAGACCGGGCAGTTCCTGACCAGCACCCCACCAAGTCCTCAGTAAGGCCTGTCTTTGGGGG 2261
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2262 AGCAGGGTTTCAGGAGGACAGTGGGGGTGGTGTAGAACTCATGGCTGGCGGTTCCGGGCCTCTCAGGAAGCTTT 2335
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2336 GCCACTGGGCTTGGGGTTAAGTGGGTGTGGGGCTCCGAACCCTAAATGGGTGAGAGTTGAAATGAAAGCGGCAC 2409
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2410 CTGTAGTCCGTTTGGGGTGCAGGTGTGTGCCAGGGGTCTTCAGCCCCGGCTGATGGCCACATGAACCACATGAG 2483
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2484 GAGAGGCAGGGCGTGTCAGCAGCAAACCTAAGTGTGTGCTCATTTCTGTGGGCCCTTACTCTGTGACACTGCAG 2557
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2558 CTCTCCAGAGAGACGCTTTGAAAACAAAACAGGAAAGAACACACGGCCCCGCGTCTGTTGCCTGAGTCACTGTA 2631
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2632 TTCCTTAAAAGGTGAAGGACCCTGGTCCTTGGCTTTTCGTGCACATGAGAAAATGTTGGCCAAGGTTAGCGATT 2705
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2706 ATGCTTCTGTAATCTGTAACCAGAAGTGCTCTTATGCCCAAACCTTGATGTGATTCTGCTGTAATGTAACTTCG 2779
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2780 GAGCCAGCTGGATGGATGTGACTGTGCAGGTCCTGAGCCCCGGCCCCCGTAACCAAGCAGTGGGCCGAGACACT 2853
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2854 GAGCCGGGCAGTCAAACAGGAGCTCTCTAAGGCTGCTCCCGGGCTGGGACCTGGGTCTAGGATTCTCAGTAAGA 2927
Query 793 --------------------------------- 792
Sbjct 2928 CCTTTGAATAAAACTAACTTGAATTCTTCAAAA 2960
