Nucleotide Global Alignment
Description
- Query:
- TRCN0000471005
- Subject:
- NM_001271848.1
- Aligned Length:
- 2237
- Identities:
- 1229
- Gaps:
- 894
Alignment
Query 1 ---------------------------------------------------------------AT------GGA 5
|| |||
Sbjct 1 ATGCCCTGCTGTAGTCACAGGAGCTGTAGAGAGGACCCCGGTACATCTGAAAGCCGGGAAATGATGTTTCAGGA 74
Query 6 CCCAGTGGCTTTTAAGGATGTGGCTGTGAACTTCACCCAGGAGGAGTGGGCTTTGCTGGATATTTCCCAGAGGA 79
|||||||||.|||.||||||||||||||||||||||||||||.||||||.|.|||||||||||||||||||.||
Sbjct 75 CCCAGTGGCCTTTGAGGATGTGGCTGTGAACTTCACCCAGGAAGAGTGGACATTGCTGGATATTTCCCAGAAGA 148
Query 80 AACTCTACAGGGAAGTGATGCTGGAAACTTTCAGGAACCTGACCTCTTTAGGAAAAAGGTGGAAAGACCAGAAC 153
|.||||.||||||||||||||||||||||||||||||||||||||||.|||||||||..||||..|||||||||
Sbjct 149 ATCTCTTCAGGGAAGTGATGCTGGAAACTTTCAGGAACCTGACCTCTATAGGAAAAAAATGGAGTGACCAGAAC 222
Query 154 ATTGAATATGAGCACCAAAACCCCAGGAGAAACTTCAGGAGTCTCATAGAAGAAAAAGTCAATGAAATTAAAGA 227
||||||||||||.|||||||||||||.||||.|||||||||||||||||||||.||||||||||||||||||||
Sbjct 223 ATTGAATATGAGTACCAAAACCCCAGAAGAAGCTTCAGGAGTCTCATAGAAGAGAAAGTCAATGAAATTAAAGA 296
Query 228 TGACAGTCATTGTGGAGAAACTTTTACCCCAGTTCCAGATGACAGACTGAACTTCCAGGAGAAGAAAGCTTCTC 301
.||||||||||||||||||||||||||||..|||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGACAGTCATTGTGGAGAAACTTTTACCCAGGTTCCAGATGACAGACTGAACTTCCAGGAGAAGAAAGCTTCTC 370
Query 302 CTGAAGTAAAATCATGTGAAAGCTTTGTGTGTGGAGAAGTTGGCCTAGGTAACTCATCTTTTAATATGAACATC 375
|||||||||||||||||||.|||||||||||||.||||||||||.||||||||||||||||||||||||.||||
Sbjct 371 CTGAAGTAAAATCATGTGACAGCTTTGTGTGTGCAGAAGTTGGCATAGGTAACTCATCTTTTAATATGAGCATC 444
Query 376 AGAGGTGACATTGGACACAAGGCATATGAGTATCAGGAATATGGACCAAAGCCATGTAAGTGTCAACAACCTAA 449
||||||||||.||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 445 AGAGGTGACACTGGACACAAGGCATATGAGTATCAGGAATATGGACCAAAGCCATATAAGTGTCAACAACCTAA 518
Query 450 A------AAAGCCTTCAGATACCGCCCCTCCTTTAGAACACAAGAAAGGGATCACACTGGAGAGAAACCCAATG 517
| |||||||||||.||.|||||.|||.||||||||||||||||||||||||||||||||||||||.|||
Sbjct 519 AAATAAGAAAGCCTTCAGGTATCGCCCATCCATTAGAACACAAGAAAGGGATCACACTGGAGAGAAACCCTATG 592
Query 518 CTTGTAAAGTATGTGGAAAAACCTTTATTTCCCATTCAAGTGTTCGAAGACACATGGTAATGCACAGTGGGGAT 591
||||||||||.|||||||||||||||||||.|||||||||..||||||||||||||||||||||||||||||||
Sbjct 593 CTTGTAAAGTCTGTGGAAAAACCTTTATTTTCCATTCAAGCATTCGAAGACACATGGTAATGCACAGTGGGGAT 666
Query 592 GGACCTTATAAATGTAAGTTTTGTGGGAAAGCATTCCATTGTCTCAGATTATATCTTATCCATGAAAGAATTCA 665
|||.|||||||||||||.||||||||||||||.|||||||.|.||||.||||||||||||||||||||||.|||
Sbjct 667 GGAACTTATAAATGTAAATTTTGTGGGAAAGCCTTCCATTCTTTCAGTTTATATCTTATCCATGAAAGAACTCA 740
Query 666 CACTGGAGAGAAACCATGTGAATGTAAACAGTGTGGTAAATCCTTTAGTTATTCTGCTACCCATCGAATACATA 739
|||||||||||||||||.||||||||||||.||||||||||||||||.||||||||||||||.||.|||||||.
Sbjct 741 CACTGGAGAGAAACCATATGAATGTAAACAATGTGGTAAATCCTTTACTTATTCTGCTACCCTTCAAATACATG 814
Query 740 AAAGAACTCACACTGGAGAAAAGCCTTATGAA--TATCAGGAGTGTGGGAAAGCATTTCATAGTCCCAGATCCT 811
||||||||||||||||.||.|||||.|||||| ||.|| |.||||..|||||||||||||||.|.||.||||
Sbjct 815 AAAGAACTCACACTGGGGAGAAGCCCTATGAATGTAGCA--AATGTGATAAAGCATTTCATAGTTCTAGTTCCT 886
Query 812 ATCGTAGACATGAAAGGATTCACATGGGAGAAAAGGCTTATCAATGTAAGGAATGTGGAAAAGCATTCACGTGT 885
|||.||||||||||||.|.||||||||||||.|||.||||||||||.||.|||||||||||||||||..|.|.|
Sbjct 887 ATCATAGACATGAAAGAAGTCACATGGGAGAGAAGCCTTATCAATGCAAAGAATGTGGAAAAGCATTTGCATAT 960
Query 886 CCCCGTTATGTTCGTATACATGAAAGGACCCACTCTAGGAAAAATCTCTATGAATGTAAGCAGTGTGGGAAAGC 959
.||.|||.|.||||||.|||||||||||||||||||.|||||||.|..||||||||||||||.|.||||.|||.
Sbjct 961 ACCAGTTCTCTTCGTAGACATGAAAGGACCCACTCTGGGAAAAAACCGTATGAATGTAAGCAATATGGGGAAGG 1034
Query 960 ATTATCCTCTCTTACAAGTTTTCAAACACACGTAAGATTGCACTCTGGAGAAAGACCTTATGAATGTAAGATAT 1033
.|||||||.|||||.||||||||||||||||.|||||.||.||||||||||||||||||||.||||||||||||
Sbjct 1035 CTTATCCTATCTTATAAGTTTTCAAACACACATAAGAATGAACTCTGGAGAAAGACCTTATAAATGTAAGATAT 1108
Query 1034 GTGGAAAAGACTTTTGTTCTGTGAATTCATTTCAAAGACATGAAAAAATTCACAGTGGAGAGAAACCCTATAAA 1107
||||.||||.|||||.|||||..||.||||||||||.|||||||||||.|||||.|||||||||||.|||||||
Sbjct 1109 GTGGGAAAGGCTTTTATTCTGCCAAGTCATTTCAAACACATGAAAAAACTCACACTGGAGAGAAACGCTATAAA 1182
Query 1108 TGTAAGCAGTGTGGTAAAGCCTTCCCTCATTCCAGTTCCCTTCGATATCATGAAAGGACTCACACTGGAGAGAA 1181
||.|||||.|||||||||||||||..||.||||||||||.||||||||||||||||||.|||||||||||||||
Sbjct 1183 TGCAAGCAATGTGGTAAAGCCTTCAATCTTTCCAGTTCCTTTCGATATCATGAAAGGATTCACACTGGAGAGAA 1256
Query 1182 ACCCTATGAGTGTAAGC--------------------------------------------------------- 1198
|||||||||||||||||
Sbjct 1257 ACCCTATGAGTGTAAGCAGTGTGGGAAAGCCTTCAGATCTGCCTCACAGCTTCGAGTGCACGGTGGGACTCACA 1330
Query 1199 ---------------------------AATGTGGGAAAGCCTTCAGATCTGCCTCACACCTTCGAGTGCATGGT 1245
|||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 1331 CTGGAGAGAAACCCTATGAATGTAAGGAATGTGGGAAAGCCTTCAGATCTACCTCACACCTTCGAGTGCATGGT 1404
Query 1246 AGGACTCACACTGGAGAGAAACCGTATGAATGTAAGGAATGTGGGAAAGCCTTCAGATATGTGAATAACCTTCA 1319
||||||||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||..|||||||
Sbjct 1405 AGGACTCATACTGGAGAGAAACCCTATGAATGTAAGGAATGTGGGAAAGCCTTCAGATATGTGAAGCACCTTCA 1478
Query 1320 AAGTCATGAAAGGACACAAACACACA------------------------------------------------ 1345
||.|||||||||||||.|||.|||||
Sbjct 1479 AATTCATGAAAGGACAGAAAAACACATAAGAATGCCCTCTGGAGAAAGACCTTATAAATGTAGTATATGTGAGA 1552
Query 1346 -------------------------------------------------------------------------- 1345
Sbjct 1553 AAGGCTTTTATTCTGCCAAGTCATTTCAAACACATGAAAAAACTCACACTGGAGAGAAACCCTATGAATGCAAC 1626
Query 1346 -------------------------------------------------------------------------- 1345
Sbjct 1627 CAATGTGGTAAAGCCTTCAGATGTTGCAATTCCCTTCGATATCATGAAAGGACTCACACTGGAGAGAAACCCTA 1700
Query 1346 -------------------------------------------------------------------------- 1345
Sbjct 1701 TGAGTGTAAGCAATGTGGGAAAGCCTTCAGATCTGCCTCACACCTTCGAATGCATGAAAGGACTCACACTGGAG 1774
Query 1346 -------------------------------------------------------------------------- 1345
Sbjct 1775 AGAAACCCTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGTTGTGCCTCAAACCTTCGAAAGCATGGTAGGACT 1848
Query 1346 -------------------------------------------------------------------------- 1345
Sbjct 1849 CACACTGGAGAGAAACCCTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGATCTGCCTCAAACCTTCAGATGCA 1922
Query 1346 -------------------------------------------------------------------------- 1345
Sbjct 1923 TGAAAGGACTCACACTGGAGAGAAACCCTATGAATGTAAGGAATGCGAAAAAGCATTCTGTAAATTCTCTTCTT 1996
Query 1346 -------------------------------------------------------------------------- 1345
Sbjct 1997 TTCAAATACATGAAAGGAAGCACAGAGGAGAGAAGCCCTATGAATGTAAGCATTGTGGGAATGGATTCACATCT 2070
Query 1346 -------------------------------------------------------------------------- 1345
Sbjct 2071 GCCAAGATTCTTCAAATACATGCAAGAACACACATTGGAGAGAAACACTATGAATGTAAGGAATGCGGAAAAGC 2144
Query 1346 -------------------------------------------------------------------------- 1345
Sbjct 2145 ATTCAATTATTTTTCTTCCTTGCATATACACGCAAGGACTCATATGGGAGAGAAGCCATATGAATGTAAGGATT 2218
Query 1346 ----------------- 1345
Sbjct 2219 GTGGGAAAGCATTCAGC 2235
