Nucleotide Global Alignment

Description

Query:
TRCN0000471005
Subject:
NM_001348723.1
Aligned Length:
1455
Identities:
1164
Gaps:
209

Alignment

Query    1  ATGGACCCAGTGGCTTTTAAGGATGTGGCTGTGAACTTCACCCAGGAGGAGTGGGCTTTGCTGGATATTTCCCA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GAGGAAACTCTACAGGGAAGTGATGCTGGAAACTTTCAGGAACCTGACCTCTTTAGGAAAAAGGTGGAAAGACC  148
                                  |||||||||||||||.||||||||||||||.|||||||||.|||||||||||
Sbjct    1  ----------------------ATGCTGGAAACTTTCTGGAACCTGACCTCTATAGGAAAAAAGTGGAAAGACC  52

Query  149  AGAACATTGAATATGAGCACCAAAACCCCAGGAGAAACTTCAGGAGTCTCATAGAAGAAAAAGTCAATGAAATT  222
            |||||||||||||||||.|||||||||||||||||||||||||||||.|||.||||||.|||||||||||||||
Sbjct   53  AGAACATTGAATATGAGTACCAAAACCCCAGGAGAAACTTCAGGAGTGTCACAGAAGAGAAAGTCAATGAAATT  126

Query  223  AAAGATGACAGTCATTGTGGAGAAACTTTTACCCCAGTTCCAGATGACAGACTGAACTTCCAGGAGAAGAAAGC  296
            |||||.||||||||||||||||||||||||||||||||||||||||||||.||||||||||||.||||||||||
Sbjct  127  AAAGAAGACAGTCATTGTGGAGAAACTTTTACCCCAGTTCCAGATGACAGGCTGAACTTCCAGAAGAAGAAAGC  200

Query  297  TTCTCCTGAAGTAAAATCATGTGAAAGCTTTGTGTGTGGAGAAGTTGGCCTAGGTAACTCATCTTTTAATATGA  370
            ||||||||||||||||||||||||.||||||||||||   |||||||||||||||||||||||||.||||||||
Sbjct  201  TTCTCCTGAAGTAAAATCATGTGACAGCTTTGTGTGT---GAAGTTGGCCTAGGTAACTCATCTTCTAATATGA  271

Query  371  ACATCAGAGGTGACATTGGACACAAGGCATATGAGTATCAGGAATATGGACCAAAGCCATGTAAGTGTCAACAA  444
            |||||||||||||||.||||||||||||||.|||.|.||||||||||||||||||||||||.|||.||||||||
Sbjct  272  ACATCAGAGGTGACACTGGACACAAGGCATGTGAATGTCAGGAATATGGACCAAAGCCATGGAAGAGTCAACAA  345

Query  445  CCTAAAAAAGCCTTCAGATACCGCCCCTCCTTTAGAACACAAGAAAGGGATCACACTGGAGAGAAACCCAATGC  518
            ||||||||||||||||||||.|.|||||||||.|||||||||||||||||||||||||||.||||||||.||||
Sbjct  346  CCTAAAAAAGCCTTCAGATATCACCCCTCCTTGAGAACACAAGAAAGGGATCACACTGGAAAGAAACCCTATGC  419

Query  519  TTGTAAAGTATGTGGAAAAACCTTTATTTCCCATTCAAGTGTTCGAAGACACATGGTAATGCACAGTGGGGATG  592
            ||||||||.|||||||||||.|.||||||.|||||||||..|||.|||||||||||||.|||||||||||||||
Sbjct  420  TTGTAAAGAATGTGGAAAAAACATTATTTACCATTCAAGCATTCAAAGACACATGGTAGTGCACAGTGGGGATG  493

Query  593  GACCTTATAAATGTAAGTTTTGTGGGAAAGCATTCCATTGTCTCAGATTATATCTTATCCATGAAAGAATTCAC  666
            ||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||.||||
Sbjct  494  GACCTTATAAATGTAAGTTTTGTGGGAAAGCATTCCATTGTCTCAGTTTATATCTTATCCATGAAAGAACTCAC  567

Query  667  ACTGGAGAGAAACCATGTGAATGTAAACAGTGTGGTAAATCCTTTAGTTATTCTGCTACCCATCGAATACATAA  740
            ||||||||||||||.|.||||||||||||.|||||||||||.||||||||||||||||||||||||||||||.|
Sbjct  568  ACTGGAGAGAAACCGTATGAATGTAAACAATGTGGTAAATCTTTTAGTTATTCTGCTACCCATCGAATACATGA  641

Query  741  AAGAACTCACACTGGAGAAAAGCCTTATGAATATCAGGAGTGTGGGAAAGCATTTCATAGTCCCAGATCCTATC  814
            |||||||||||.||||||||||||||||||||.||||||.||||||||||||||.||||||||||||||||.||
Sbjct  642  AAGAACTCACATTGGAGAAAAGCCTTATGAATGTCAGGAATGTGGGAAAGCATTCCATAGTCCCAGATCCTGTC  715

Query  815  GTAGACATGAAAGGATTCACATGGGAGAAAAGGCTTATCAATGTAAGGAATGTGGAAAAGCATTCACGTGTCCC  888
            ..|||||||||||||.||||||||||||.|||||||||||||||||||||||||||||||||||||.|||||||
Sbjct  716  ACAGACATGAAAGGAGTCACATGGGAGAGAAGGCTTATCAATGTAAGGAATGTGGAAAAGCATTCATGTGTCCC  789

Query  889  CGTTATGTTCGTATACATGAAAGGACCCACTCTAGGAAAAATCTCTATGAATGTAAGCAGTGTGGGAAAGCATT  962
            |||||||||||||.|||||||||||||||||||||||||||.||.|||||||||||||||||||||||||||||
Sbjct  790  CGTTATGTTCGTAGACATGAAAGGACCCACTCTAGGAAAAAACTTTATGAATGTAAGCAGTGTGGGAAAGCATT  863

Query  963  ATCCTCTCTTACAAGTTTTCAAACACACGTAAGATTGCACTCTGGAGAAAGACCTTATGAATGTAAGATATGTG  1036
            ||||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||.|||||
Sbjct  864  ATCCTCTCTTACAAGTTTTCAAACACACATAAGAATGCACTCTGGAGAAAGACCTTATGAATGTAAGACATGTG  937

Query 1037  GAAAAGACTTTTGTTCTGTGAATTCATTTCAAAGACATGAAAAAATTCACAGTGGAGAGAAACCCTATAAATGT  1110
            |.||||.|||||.|||||..||.||||||||||||||||||||||.||||||||||||||||||.||||||||.
Sbjct  938  GGAAAGGCTTTTATTCTGCCAAGTCATTTCAAAGACATGAAAAAACTCACAGTGGAGAGAAACCGTATAAATGC  1011

Query 1111  AAGCAGTGTGGTAAAGCCTTCCCTCATTCCAGTTCCCTTCGATATCATGAAAGGACTCACACTGGAGAGAAACC  1184
            |||||.|||||||||||||||.|||.||||.|||||.|||||||||||||||||||||||||||||||||||||
Sbjct 1012  AAGCAATGTGGTAAAGCCTTCACTCGTTCCGGTTCCTTTCGATATCATGAAAGGACTCACACTGGAGAGAAACC  1085

Query 1185  CTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGATCTGCCTCACACCTTCGAGTGCATGGTAGGACTCACACTG  1258
            ||||||||||||||||||||||||||||||||||||||||.||.|.||||.|.|||||||||||||||||||||
Sbjct 1086  CTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGATCTGCCCCAAATCTTCAATTGCATGGTAGGACTCACACTG  1159

Query 1259  GAGAGAAACCG---------------------------------------------------------------  1269
            |||||||||||                                                               
Sbjct 1160  GAGAGAAACCGTATCAATGTAAGGAATGTGGGAAAGCTTTCAGATCTGCCTCACAACTTCGAATCCATCGTAGG  1233

Query 1270  ---------------------TATGAATGTAAGGAATGTGGGAAAGCCTTCAGATATGTGAATAACCTTCAAAG  1322
                                 ||||||||||||.|||||||||||||||||||||||||..|.|||.|||.|..
Sbjct 1234  ATTCACACTGGAGAGAAACCCTATGAATGTAAGAAATGTGGGAAAGCCTTCAGATATGTCCAGAACTTTCGATT  1307

Query 1323  TCATGAAAGGACACAAACACACA--------------------------  1345
            |||||||||||||||||||||.|                          
Sbjct 1308  TCATGAAAGGACACAAACACATAAGAATGCACTCTGGAGAAAGACCTTA  1356

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