Nucleotide Global Alignment

Description

• Query: TRCN0000471005
• Subject: NM_001348724.1
• Aligned Length: 1455
• Identities: 909
• Gaps: 476

Alignment

Query    1  ATGGACCCAGTGGCTTTTAAGGATGTGGCTGTGAACTTCACCCAGGAGGAGTGGGCTTTGCTGGATATTTCCCA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GAGGAAACTCTACAGGGAAGTGATGCTGGAAACTTTCAGGAACCTGACCTCTTTAGGAAAAAGGTGGAAAGACC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  AGAACATTGAATATGAGCACCAAAACCCCAGGAGAAACTTCAGGAGTCTCATAGAAGAAAAAGTCAATGAAATT  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AAAGATGACAGTCATTGTGGAGAAACTTTTACCCCAGTTCCAGATGACAGACTGAACTTCCAGGAGAAGAAAGC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  TTCTCCTGAAGTAAAATCATGTGAAAGCTTTGTGTGTGGAGAAGTTGGCCTAGGTAACTCATCTTTTAATATGA  370
                                                                                  ||||
Sbjct    1  ----------------------------------------------------------------------ATGA  4

Query  371  ACATCAGAGGTGACATTGGACACAAGGCATATGAGTATCAGGAATATGGACCAAAGCCATGTAAGTGTCAACAA  444
            |||||||||||||||.||||||||||||||.|||.|.||||||||||||||||||||||||.|||.||||||||
Sbjct    5  ACATCAGAGGTGACACTGGACACAAGGCATGTGAATGTCAGGAATATGGACCAAAGCCATGGAAGAGTCAACAA  78

Query  445  CCTAAAAAAGCCTTCAGATACCGCCCCTCCTTTAGAACACAAGAAAGGGATCACACTGGAGAGAAACCCAATGC  518
            ||||||||||||||||||||.|.|||||||||.|||||||||||||||||||||||||||.||||||||.||||
Sbjct   79  CCTAAAAAAGCCTTCAGATATCACCCCTCCTTGAGAACACAAGAAAGGGATCACACTGGAAAGAAACCCTATGC  152

Query  519  TTGTAAAGTATGTGGAAAAACCTTTATTTCCCATTCAAGTGTTCGAAGACACATGGTAATGCACAGTGGGGATG  592
            ||||||||.|||||||||||.|.||||||.|||||||||..|||.|||||||||||||.|||||||||||||||
Sbjct  153  TTGTAAAGAATGTGGAAAAAACATTATTTACCATTCAAGCATTCAAAGACACATGGTAGTGCACAGTGGGGATG  226

Query  593  GACCTTATAAATGTAAGTTTTGTGGGAAAGCATTCCATTGTCTCAGATTATATCTTATCCATGAAAGAATTCAC  666
            ||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||.||||
Sbjct  227  GACCTTATAAATGTAAGTTTTGTGGGAAAGCATTCCATTGTCTCAGTTTATATCTTATCCATGAAAGAACTCAC  300

Query  667  ACTGGAGAGAAACCATGTGAATGTAAACAGTGTGGTAAATCCTTTAGTTATTCTGCTACCCATCGAATACATAA  740
            ||||||||||||||.|.||||||||||||.|||||||||||.||||||||||||||||||||||||||||||.|
Sbjct  301  ACTGGAGAGAAACCGTATGAATGTAAACAATGTGGTAAATCTTTTAGTTATTCTGCTACCCATCGAATACATGA  374

Query  741  AAGAACTCACACTGGAGAAAAGCCTTATGAATATCAGGAGTGTGGGAAAGCATTTCATAGTCCCAGATCCTATC  814
            |||||||||||.||||||||||||||||||||.||||||.||||||||||||||.||||||||||||||||.||
Sbjct  375  AAGAACTCACATTGGAGAAAAGCCTTATGAATGTCAGGAATGTGGGAAAGCATTCCATAGTCCCAGATCCTGTC  448

Query  815  GTAGACATGAAAGGATTCACATGGGAGAAAAGGCTTATCAATGTAAGGAATGTGGAAAAGCATTCACGTGTCCC  888
            ..|||||||||||||.||||||||||||.|||||||||||||||||||||||||||||||||||||.|||||||
Sbjct  449  ACAGACATGAAAGGAGTCACATGGGAGAGAAGGCTTATCAATGTAAGGAATGTGGAAAAGCATTCATGTGTCCC  522

Query  889  CGTTATGTTCGTATACATGAAAGGACCCACTCTAGGAAAAATCTCTATGAATGTAAGCAGTGTGGGAAAGCATT  962
            |||||||||||||.|||||||||||||||||||||||||||.||.|||||||||||||||||||||||||||||
Sbjct  523  CGTTATGTTCGTAGACATGAAAGGACCCACTCTAGGAAAAAACTTTATGAATGTAAGCAGTGTGGGAAAGCATT  596

Query  963  ATCCTCTCTTACAAGTTTTCAAACACACGTAAGATTGCACTCTGGAGAAAGACCTTATGAATGTAAGATATGTG  1036
            ||||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||.|||||
Sbjct  597  ATCCTCTCTTACAAGTTTTCAAACACACATAAGAATGCACTCTGGAGAAAGACCTTATGAATGTAAGACATGTG  670

Query 1037  GAAAAGACTTTTGTTCTGTGAATTCATTTCAAAGACATGAAAAAATTCACAGTGGAGAGAAACCCTATAAATGT  1110
            |.||||.|||||.|||||..||.||||||||||||||||||||||.||||||||||||||||||.||||||||.
Sbjct  671  GGAAAGGCTTTTATTCTGCCAAGTCATTTCAAAGACATGAAAAAACTCACAGTGGAGAGAAACCGTATAAATGC  744

Query 1111  AAGCAGTGTGGTAAAGCCTTCCCTCATTCCAGTTCCCTTCGATATCATGAAAGGACTCACACTGGAGAGAAACC  1184
            |||||.|||||||||||||||.|||.||||.|||||.|||||||||||||||||||||||||||||||||||||
Sbjct  745  AAGCAATGTGGTAAAGCCTTCACTCGTTCCGGTTCCTTTCGATATCATGAAAGGACTCACACTGGAGAGAAACC  818

Query 1185  CTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGATCTGCCTCACACCTTCGAGTGCATGGTAGGACTCACACTG  1258
            ||||||||||||||||||||||||||||||||||||||||.||.|.||||.|.|||||||||||||||||||||
Sbjct  819  CTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGATCTGCCCCAAATCTTCAATTGCATGGTAGGACTCACACTG  892

Query 1259  GAGAGAAACCG---------------------------------------------------------------  1269
            |||||||||||                                                               
Sbjct  893  GAGAGAAACCGTATCAATGTAAGGAATGTGGGAAAGCTTTCAGATCTGCCTCACAACTTCGAATCCATCGTAGG  966

Query 1270  ---------------------TATGAATGTAAGGAATGTGGGAAAGCCTTCAGATATGTGAATAACCTTCAAAG  1322
                                 ||||||||||||.|||||||||||||||||||||||||..|.|||.|||.|..
Sbjct  967  ATTCACACTGGAGAGAAACCCTATGAATGTAAGAAATGTGGGAAAGCCTTCAGATATGTCCAGAACTTTCGATT  1040

Query 1323  TCATGAAAGGACACAAACACACA--------------------------  1345
            |||||||||||||||||||||.|                          
Sbjct 1041  TCATGAAAGGACACAAACACATAAGAATGCACTCTGGAGAAAGACCTTA  1089