Nucleotide Global Alignment
Description
- Query:
- TRCN0000471005
- Subject:
- NM_144566.3
- Aligned Length:
- 2228
- Identities:
- 1229
- Gaps:
- 885
Alignment
Query 1 ------------------------------------------------------------ATGGACCCAGTGGC 14
||||||||||||||
Sbjct 1 ATGCCCTGCTGTAGTCACAGGAGCTGTAGAGAGGACCCCGGTACATCTGAAAGCCGGGAAATGGACCCAGTGGC 74
Query 15 TTTTAAGGATGTGGCTGTGAACTTCACCCAGGAGGAGTGGGCTTTGCTGGATATTTCCCAGAGGAAACTCTACA 88
.|||.||||||||||||||||||||||||||||.||||||.|.|||||||||||||||||||.|||.||||.||
Sbjct 75 CTTTGAGGATGTGGCTGTGAACTTCACCCAGGAAGAGTGGACATTGCTGGATATTTCCCAGAAGAATCTCTTCA 148
Query 89 GGGAAGTGATGCTGGAAACTTTCAGGAACCTGACCTCTTTAGGAAAAAGGTGGAAAGACCAGAACATTGAATAT 162
||||||||||||||||||||||||||||||||||||||.|||||||||..||||..||||||||||||||||||
Sbjct 149 GGGAAGTGATGCTGGAAACTTTCAGGAACCTGACCTCTATAGGAAAAAAATGGAGTGACCAGAACATTGAATAT 222
Query 163 GAGCACCAAAACCCCAGGAGAAACTTCAGGAGTCTCATAGAAGAAAAAGTCAATGAAATTAAAGATGACAGTCA 236
|||.|||||||||||||.||||.|||||||||||||||||||||.||||||||||||||||||||.||||||||
Sbjct 223 GAGTACCAAAACCCCAGAAGAAGCTTCAGGAGTCTCATAGAAGAGAAAGTCAATGAAATTAAAGAAGACAGTCA 296
Query 237 TTGTGGAGAAACTTTTACCCCAGTTCCAGATGACAGACTGAACTTCCAGGAGAAGAAAGCTTCTCCTGAAGTAA 310
||||||||||||||||||||..||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TTGTGGAGAAACTTTTACCCAGGTTCCAGATGACAGACTGAACTTCCAGGAGAAGAAAGCTTCTCCTGAAGTAA 370
Query 311 AATCATGTGAAAGCTTTGTGTGTGGAGAAGTTGGCCTAGGTAACTCATCTTTTAATATGAACATCAGAGGTGAC 384
||||||||||.|||||||||||||.||||||||||.||||||||||||||||||||||||.|||||||||||||
Sbjct 371 AATCATGTGACAGCTTTGTGTGTGCAGAAGTTGGCATAGGTAACTCATCTTTTAATATGAGCATCAGAGGTGAC 444
Query 385 ATTGGACACAAGGCATATGAGTATCAGGAATATGGACCAAAGCCATGTAAGTGTCAACAACCTAAA------AA 452
|.||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||| ||
Sbjct 445 ACTGGACACAAGGCATATGAGTATCAGGAATATGGACCAAAGCCATATAAGTGTCAACAACCTAAAAATAAGAA 518
Query 453 AGCCTTCAGATACCGCCCCTCCTTTAGAACACAAGAAAGGGATCACACTGGAGAGAAACCCAATGCTTGTAAAG 526
|||||||||.||.|||||.|||.||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 519 AGCCTTCAGGTATCGCCCATCCATTAGAACACAAGAAAGGGATCACACTGGAGAGAAACCCTATGCTTGTAAAG 592
Query 527 TATGTGGAAAAACCTTTATTTCCCATTCAAGTGTTCGAAGACACATGGTAATGCACAGTGGGGATGGACCTTAT 600
|.|||||||||||||||||||.|||||||||..|||||||||||||||||||||||||||||||||||.|||||
Sbjct 593 TCTGTGGAAAAACCTTTATTTTCCATTCAAGCATTCGAAGACACATGGTAATGCACAGTGGGGATGGAACTTAT 666
Query 601 AAATGTAAGTTTTGTGGGAAAGCATTCCATTGTCTCAGATTATATCTTATCCATGAAAGAATTCACACTGGAGA 674
||||||||.||||||||||||||.|||||||.|.||||.||||||||||||||||||||||.||||||||||||
Sbjct 667 AAATGTAAATTTTGTGGGAAAGCCTTCCATTCTTTCAGTTTATATCTTATCCATGAAAGAACTCACACTGGAGA 740
Query 675 GAAACCATGTGAATGTAAACAGTGTGGTAAATCCTTTAGTTATTCTGCTACCCATCGAATACATAAAAGAACTC 748
||||||||.||||||||||||.||||||||||||||||.||||||||||||||.||.|||||||.|||||||||
Sbjct 741 GAAACCATATGAATGTAAACAATGTGGTAAATCCTTTACTTATTCTGCTACCCTTCAAATACATGAAAGAACTC 814
Query 749 ACACTGGAGAAAAGCCTTATGAA--TATCAGGAGTGTGGGAAAGCATTTCATAGTCCCAGATCCTATCGTAGAC 820
|||||||.||.|||||.|||||| ||.|| |.||||..|||||||||||||||.|.||.|||||||.|||||
Sbjct 815 ACACTGGGGAGAAGCCCTATGAATGTAGCA--AATGTGATAAAGCATTTCATAGTTCTAGTTCCTATCATAGAC 886
Query 821 ATGAAAGGATTCACATGGGAGAAAAGGCTTATCAATGTAAGGAATGTGGAAAAGCATTCACGTGTCCCCGTTAT 894
|||||||.|.||||||||||||.|||.||||||||||.||.|||||||||||||||||..|.|.|.||.|||.|
Sbjct 887 ATGAAAGAAGTCACATGGGAGAGAAGCCTTATCAATGCAAAGAATGTGGAAAAGCATTTGCATATACCAGTTCT 960
Query 895 GTTCGTATACATGAAAGGACCCACTCTAGGAAAAATCTCTATGAATGTAAGCAGTGTGGGAAAGCATTATCCTC 968
.||||||.|||||||||||||||||||.|||||||.|..||||||||||||||.|.||||.|||..|||||||.
Sbjct 961 CTTCGTAGACATGAAAGGACCCACTCTGGGAAAAAACCGTATGAATGTAAGCAATATGGGGAAGGCTTATCCTA 1034
Query 969 TCTTACAAGTTTTCAAACACACGTAAGATTGCACTCTGGAGAAAGACCTTATGAATGTAAGATATGTGGAAAAG 1042
|||||.||||||||||||||||.|||||.||.||||||||||||||||||||.||||||||||||||||.||||
Sbjct 1035 TCTTATAAGTTTTCAAACACACATAAGAATGAACTCTGGAGAAAGACCTTATAAATGTAAGATATGTGGGAAAG 1108
Query 1043 ACTTTTGTTCTGTGAATTCATTTCAAAGACATGAAAAAATTCACAGTGGAGAGAAACCCTATAAATGTAAGCAG 1116
.|||||.|||||..||.||||||||||.|||||||||||.|||||.|||||||||||.|||||||||.|||||.
Sbjct 1109 GCTTTTATTCTGCCAAGTCATTTCAAACACATGAAAAAACTCACACTGGAGAGAAACGCTATAAATGCAAGCAA 1182
Query 1117 TGTGGTAAAGCCTTCCCTCATTCCAGTTCCCTTCGATATCATGAAAGGACTCACACTGGAGAGAAACCCTATGA 1190
|||||||||||||||..||.||||||||||.||||||||||||||||||.||||||||||||||||||||||||
Sbjct 1183 TGTGGTAAAGCCTTCAATCTTTCCAGTTCCTTTCGATATCATGAAAGGATTCACACTGGAGAGAAACCCTATGA 1256
Query 1191 GTGTAAGC------------------------------------------------------------------ 1198
||||||||
Sbjct 1257 GTGTAAGCAGTGTGGGAAAGCCTTCAGATCTGCCTCACAGCTTCGAGTGCACGGTGGGACTCACACTGGAGAGA 1330
Query 1199 ------------------AATGTGGGAAAGCCTTCAGATCTGCCTCACACCTTCGAGTGCATGGTAGGACTCAC 1254
|||||||||||||||||||||||.|||||||||||||||||||||||||||||||.
Sbjct 1331 AACCCTATGAATGTAAGGAATGTGGGAAAGCCTTCAGATCTACCTCACACCTTCGAGTGCATGGTAGGACTCAT 1404
Query 1255 ACTGGAGAGAAACCGTATGAATGTAAGGAATGTGGGAAAGCCTTCAGATATGTGAATAACCTTCAAAGTCATGA 1328
||||||||||||||.|||||||||||||||||||||||||||||||||||||||||..|||||||||.||||||
Sbjct 1405 ACTGGAGAGAAACCCTATGAATGTAAGGAATGTGGGAAAGCCTTCAGATATGTGAAGCACCTTCAAATTCATGA 1478
Query 1329 AAGGACACAAACACACA--------------------------------------------------------- 1345
|||||||.|||.|||||
Sbjct 1479 AAGGACAGAAAAACACATAAGAATGCCCTCTGGAGAAAGACCTTATAAATGTAGTATATGTGAGAAAGGCTTTT 1552
Query 1346 -------------------------------------------------------------------------- 1345
Sbjct 1553 ATTCTGCCAAGTCATTTCAAACACATGAAAAAACTCACACTGGAGAGAAACCCTATGAATGCAACCAATGTGGT 1626
Query 1346 -------------------------------------------------------------------------- 1345
Sbjct 1627 AAAGCCTTCAGATGTTGCAATTCCCTTCGATATCATGAAAGGACTCACACTGGAGAGAAACCCTATGAGTGTAA 1700
Query 1346 -------------------------------------------------------------------------- 1345
Sbjct 1701 GCAATGTGGGAAAGCCTTCAGATCTGCCTCACACCTTCGAATGCATGAAAGGACTCACACTGGAGAGAAACCCT 1774
Query 1346 -------------------------------------------------------------------------- 1345
Sbjct 1775 ATGAGTGTAAGCAATGTGGGAAAGCCTTCAGTTGTGCCTCAAACCTTCGAAAGCATGGTAGGACTCACACTGGA 1848
Query 1346 -------------------------------------------------------------------------- 1345
Sbjct 1849 GAGAAACCCTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGATCTGCCTCAAACCTTCAGATGCATGAAAGGAC 1922
Query 1346 -------------------------------------------------------------------------- 1345
Sbjct 1923 TCACACTGGAGAGAAACCCTATGAATGTAAGGAATGCGAAAAAGCATTCTGTAAATTCTCTTCTTTTCAAATAC 1996
Query 1346 -------------------------------------------------------------------------- 1345
Sbjct 1997 ATGAAAGGAAGCACAGAGGAGAGAAGCCCTATGAATGTAAGCATTGTGGGAATGGATTCACATCTGCCAAGATT 2070
Query 1346 -------------------------------------------------------------------------- 1345
Sbjct 2071 CTTCAAATACATGCAAGAACACACATTGGAGAGAAACACTATGAATGTAAGGAATGCGGAAAAGCATTCAATTA 2144
Query 1346 -------------------------------------------------------------------------- 1345
Sbjct 2145 TTTTTCTTCCTTGCATATACACGCAAGGACTCATATGGGAGAGAAGCCATATGAATGTAAGGATTGTGGGAAAG 2218
Query 1346 -------- 1345
Sbjct 2219 CATTCAGC 2226
