Nucleotide Global Alignment

Description

Query:
TRCN0000471005
Subject:
XM_017026254.1
Aligned Length:
1785
Identities:
979
Gaps:
806

Alignment

Query    1  ATGGACCCAGTGGCTTTTAAGGATGTGGCTGTGAACTTCACCCAGGAGGAGTGGGCTTTGCTGGATATTTCCCA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GAGGAAACTCTACAGGGAAGTGATGCTGGAAACTTTCAGGAACCTGACCTCTTTAGGAAAAAGGTGGAAAGACC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  AGAACATTGAATATGAGCACCAAAACCCCAGGAGAAACTTCAGGAGTCTCATAGAAGAAAAAGTCAATGAAATT  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AAAGATGACAGTCATTGTGGAGAAACTTTTACCCCAGTTCCAGATGACAGACTGAACTTCCAGGAGAAGAAAGC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  TTCTCCTGAAGTAAAATCATGTGAAAGCTTTGTGTGTGGAGAAGTTGGCCTAGGTAACTCATCTTTTAATATGA  370
                                                                                  ||||
Sbjct    1  ----------------------------------------------------------------------ATGA  4

Query  371  ACATCAGAGGTGACATTGGACACAAGGCATATGAGTATCAGGAATATGGACCAAAGCCATGTAAGTGTCAACAA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    5  ACATCAGAGGTGACATTGGACACAAGGCATATGAGTATCAGGAATATGGACCAAAGCCATGTAAGTGTCAACAA  78

Query  445  CCTAAAAAAGCCTTCAGATACCGCCCCTCCTTTAGAACACAAGAAAGGGATCACACTGGAGAGAAACCCAATGC  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   79  CCTAAAAAAGCCTTCAGATACCGCCCCTCCTTTAGAACACAAGAAAGGGATCACACTGGAGAGAAACCCAATGC  152

Query  519  TTGTAAAGTATGTGGAAAAACCTTTATTTCCCATTCAAGTGTTCGAAGACACATGGTAATGCACAGTGGGGATG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  153  TTGTAAAGTATGTGGAAAAACCTTTATTTCCCATTCAAGTGTTCGAAGACACATGGTAATGCACAGTGGGGATG  226

Query  593  GACCTTATAAATGTAAGTTTTGTGGGAAAGCATTCCATTGTCTCAGATTATATCTTATCCATGAAAGAATTCAC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  227  GACCTTATAAATGTAAGTTTTGTGGGAAAGCATTCCATTGTCTCAGATTATATCTTATCCATGAAAGAATTCAC  300

Query  667  ACTGGAGAGAAACCATGTGAATGTAAACAGTGTGGTAAATCCTTTAGTTATTCTGCTACCCATCGAATACATAA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  301  ACTGGAGAGAAACCATGTGAATGTAAACAGTGTGGTAAATCCTTTAGTTATTCTGCTACCCATCGAATACATAA  374

Query  741  AAGAACTCACACTGGAGAAAAGCCTTATGAATATCAGGAGTGTGGGAAAGCATTTCATAGTCCCAGATCCTATC  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  375  AAGAACTCACACTGGAGAAAAGCCTTATGAATATCAGGAGTGTGGGAAAGCATTTCATAGTCCCAGATCCTATC  448

Query  815  GTAGACATGAAAGGATTCACATGGGAGAAAAGGCTTATCAATGTAAGGAATGTGGAAAAGCATTCACGTGTCCC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  449  GTAGACATGAAAGGATTCACATGGGAGAAAAGGCTTATCAATGTAAGGAATGTGGAAAAGCATTCACGTGTCCC  522

Query  889  CGTTATGTTCGTATACATGAAAGGACCCACTCTAGGAAAAATCTCTATGAATGTAAGCAGTGTGGGAAAGCATT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  523  CGTTATGTTCGTATACATGAAAGGACCCACTCTAGGAAAAATCTCTATGAATGTAAGCAGTGTGGGAAAGCATT  596

Query  963  ATCCTCTCTTACAAGTTTTCAAACACACGTAAGATTGCACTCTGGAGAAAGACCTTATGAATGTAAGATATGTG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  597  ATCCTCTCTTACAAGTTTTCAAACACACGTAAGATTGCACTCTGGAGAAAGACCTTATGAATGTAAGATATGTG  670

Query 1037  GAAAAGACTTTTGTTCTGTGAATTCATTTCAAAGACATGAAAAAATTCACAGTGGAGAGAAACCCTATAAATGT  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  671  GAAAAGACTTTTGTTCTGTGAATTCATTTCAAAGACATGAAAAAATTCACAGTGGAGAGAAACCCTATAAATGT  744

Query 1111  AAGCAGTGTGGTAAAGCCTTCCCTCATTCCAGTTCCCTTCGATATCATGAAAGGACTCACACTGGAGAGAAACC  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  745  AAGCAGTGTGGTAAAGCCTTCCCTCATTCCAGTTCCCTTCGATATCATGAAAGGACTCACACTGGAGAGAAACC  818

Query 1185  CTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGATCTGCCTCACACCTTCGAGTGCATGGTAGGACTCACACTG  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  819  CTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGATCTGCCTCACACCTTCGAGTGCATGGTAGGACTCACACTG  892

Query 1259  GAGAGAAACCGTATGAATGTAAGGAATGTGGGAAAGCCTTCAGATATGTGAATAACCTTCAAAGTCATGAAAGG  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  893  GAGAGAAACCGTATGAATGTAAGGAATGTGGGAAAGCCTTCAGATATGTGAATAACCTTCAAAGTCATGAAAGG  966

Query 1333  ACACAAACACACA-------------------------------------------------------------  1345
            |||||||||||||                                                             
Sbjct  967  ACACAAACACACATAAGAATACACTCTGGAGAAAGACGTTATAAATGTAAGATATGTGGGAAAGGCTTTTATTG  1040

Query 1346  --------------------------------------------------------------------------  1345
                                                                                      
Sbjct 1041  TCCCAAATCATTTCAAAGACATGAAAAAACTCACACTGGAGAGAAACTCTATGAATGCAAGCAACGTTCAGTAG  1114

Query 1346  --------------------------------------------------------------------------  1345
                                                                                      
Sbjct 1115  TTCCTTCAGTAGTTCCAGTTCCTTTTGATATCATGAAAGGACTCACACTGGAGAGAAGCCCTATAAATGCGAGC  1188

Query 1346  --------------------------------------------------------------------------  1345
                                                                                      
Sbjct 1189  AATGTGGGAAAGCCTTCAGAGCTGTGTCAATCCTTTGAATGCATGGTAGGACTCACCCTGAAGAGAAACCCTAT  1262

Query 1346  --------------------------------------------------------------------------  1345
                                                                                      
Sbjct 1263  GAGTGTGAGCAATGACGGAAAGCCTTCAGATCTGCCCCACACCTTTGAATACGTGGTAGGACACACAATGGAGA  1336

Query 1346  --------------------------------------------------------------------------  1345
                                                                                      
Sbjct 1337  GAAGCCCTATGCATGTAAGGAATGTGGGAAACCCTTCGGATCTGCCCAGAACCTTCGAATTCATGAAAGGACAC  1410

Query 1346  ---------  1345
                     
Sbjct 1411  AAACACACA  1419