Nucleotide Global Alignment

Description

Query:
TRCN0000471007
Subject:
XM_006496217.3
Aligned Length:
1530
Identities:
1279
Gaps:
69

Alignment

Query    1  ------------------------------------------------------------ATGGCTGAACTCAA  14
                                                                        ||||||||||||||
Sbjct    1  ATGGCTGGAACACAGGAAACCGGCGCTTCGGCAAGCAAGGCTTATACCCCTAGAAGGAAGATGGCTGAACTCAA  74

Query   15  TACTCATGTGAATGTCAAGGAAAAGATCTATGCAGTTAGATCAGTTGTTCCCAACAAAAGCAATAATGAAATAG  88
            .|||||||||||..||||.||.||||||||.||||||||||||||||||||.||||||||||||||||||||.|
Sbjct   75  CACTCATGTGAACATCAAAGAGAAGATCTACGCAGTTAGATCAGTTGTTCCGAACAAAAGCAATAATGAAATCG  148

Query   89  TCCTGGTGCTCCAACAGTTTGATTTTAATGTGGATAAAGCCGTGCAAGCCTTTGTGGATGGCAGTGCAATTCAA  162
            |.|||||.|||||||||||||||||||||||||||||||||||.||.||||||||||||||||||||.||||||
Sbjct  149  TGCTGGTACTCCAACAGTTTGATTTTAATGTGGATAAAGCCGTACAGGCCTTTGTGGATGGCAGTGCTATTCAA  222

Query  163  GTTCTAAAAGAATGGAATATGACAGGA---AAGAAGAACAATAAAAGAAAAAGAAGCAAGTCCAAGCAGCATCA  233
            |||||.|||||||||||.|||||.|||   ||||||||.||||||||.||.||||||||.||||||||||||||
Sbjct  223  GTTCTTAAAGAATGGAACATGACGGGAAAGAAGAAGAATAATAAAAGGAAGAGAAGCAAATCCAAGCAGCATCA  296

Query  234  AGGCAACAAAGATGCTAAAGACAAGGTGGAGAGGCCTGAGGCAGGGCCCCTGCAGCCGCAGCCACCACAGATTC  307
            ||||||||||||||||||.|||||||||||||||||.||||..||||||||||||||.|||.||||||.|.|.|
Sbjct  297  AGGCAACAAAGATGCTAAGGACAAGGTGGAGAGGCCAGAGGTGGGGCCCCTGCAGCCCCAGGCACCACTGGTAC  370

Query  308  AAAACGGCCCCATGAATGGCTGCGAGAAGGACAGCTCGTCCACAGATTCTGCTAACGAAAAACCAGCCCTTATC  381
            ||||.||.|.|||||||||||||||.|||||||||||.|||.|.||.|||.|.|..|||||||..|||||.|..
Sbjct  371  AAAATGGTCACATGAATGGCTGCGAAAAGGACAGCTCATCCCCTGACTCTACCAGAGAAAAACTGGCCCTCACA  444

Query  382  CCTCGTGAGAAAAAGATCTCGATACTTGAGGAACCTTCAAAGGCACTTCGTGGGGTCACAGGCCCAAATATTGA  455
            ||.|||||||||||||||||||||||.|||||||||.|||.|||.|..||||||||||||||||||||||||||
Sbjct  445  CCACGTGAGAAAAAGATCTCGATACTGGAGGAACCTCCAAGGGCTCAGCGTGGGGTCACAGGCCCAAATATTGA  518

Query  456  GAAATCAGTGAAGGATTTGCAACGCTGCACCGTTTCTCTAACTAGATATCGCGTCATGATTAAGGAAGAAGTGG  529
            ||||||.|||||||||.||||.||||||||.||||||||.||.|||||.|||||||||||.|||||||||||||
Sbjct  519  GAAATCGGTGAAGGATCTGCAGCGCTGCACTGTTTCTCTGACGAGATACCGCGTCATGATCAAGGAAGAAGTGG  592

Query  530  ATAGTTCCGTGAAGAAGATCAAAGCTGCCTTTGCTGAATTACACAACTGCATCATTGACAAAGAAGTTTCATTA  603
            |.|||||||||||||||||||||||.||.||||||||..||||||||||||||||||||||||||||||||.|.
Sbjct  593  ACAGTTCCGTGAAGAAGATCAAAGCAGCATTTGCTGAGCTACACAACTGCATCATTGACAAAGAAGTTTCACTG  666

Query  604  ATGGCAGAAATGGATAAAGTTAAAGAAGAAGCCATGGAAATCCTGACTGCTCGTCAGAAGAAAGCAGAAGAACT  677
            ||||||||||||||.|||||||||||||||||||||||.|||||||||||.|||||||||||||||||.||.||
Sbjct  667  ATGGCAGAAATGGACAAAGTTAAAGAAGAAGCCATGGACATCCTGACTGCCCGTCAGAAGAAAGCAGAGGAGCT  740

Query  678  AAAGAGACTCACTGACCTTGCCAGTCAGATGGCAGAGATGCAGCTGGCCGAACTCAGGGCAGAAATTAAGCACT  751
            .||||||||.||||||||.||||||||||||||||||||||||||||||||||||||.||.|||||||||||||
Sbjct  741  GAAGAGACTGACTGACCTAGCCAGTCAGATGGCAGAGATGCAGCTGGCCGAACTCAGAGCTGAAATTAAGCACT  814

Query  752  TTGTCAGCGAGCGTAAATATGACGAGGAGCTCGGGAAAGCTGCCCGGTTTTCCTGTGACATCGAACAGCTGAAG  825
            ||||||||||.||.||.||||||||||||||.|||||.||||||||.||.|||||||||||.|||||.|||||.
Sbjct  815  TTGTCAGCGAACGCAAGTATGACGAGGAGCTGGGGAAGGCTGCCCGCTTCTCCTGTGACATTGAACAACTGAAA  888

Query  826  GCCCAAATCATGCTCTGCGGAGAAATTACACATCCAAAGAACAACTATTCCTCAAGAACTCCCTGCAGCTCCCT  899
            |||||||||.||.||||.|||||||||||||||||||||||||.|||.||||||||||||||||||||||||||
Sbjct  889  GCCCAAATCCTGATCTGTGGAGAAATTACACATCCAAAGAACAGCTACTCCTCAAGAACTCCCTGCAGCTCCCT  962

Query  900  GCTGCCTCTGCTGAATGCGCACGCAGCAACCTCTGGGAAACAGAGTAACTTTTCCCGAAAATCATCCACTCACA  973
            |||||||||||||||..|.||.||.|.|.|.||.|||||||||.|.||.|||.||||.||.||||||..|||||
Sbjct  963  GCTGCCTCTGCTGAACACTCATGCGGTAGCTTCCGGGAAACAGGGGAATTTTGCCCGGAAGTCATCCGGTCACA  1036

Query  974  ATAAGCCCTCTGAAGGCAAAGCGGCAAACCCCAAAATGGTGAGCAGTCTCCCCAGCACCGCCGACCCCTCTCAC  1047
            |.|||||||||||.||.|||||.|||||||||||||||||||||.|.||..|||.|||.|||||..|.|.||||
Sbjct 1037  ACAAGCCCTCTGAGGGGAAAGCAGCAAACCCCAAAATGGTGAGCGGACTTGCCAACACTGCCGATGCGTGTCAC  1110

Query 1048  CAGACCATGCCGGCCAACA---AGCAGAATGGATCTTCTAACCAAAGACGGAGATTTAATCCACAGTATCATAA  1118
            |||||||||||..|.||||   |||||||||||.||||.|.|||||||||.|||||||||||||||||||   |
Sbjct 1111  CAGACCATGCCCACTAACAAGCAGCAGAATGGACCTTCCAGCCAAAGACGAAGATTTAATCCACAGTATC---A  1181

Query 1119  CAACAGGCTAAATGGGCCTGCCAAGTCGCAGGGCAGTGGGAATGAAGCCGAGCCACTGGGAAAGGGCAACAGCC  1192
            |||||||||||||||.||.||||||||.|||||..||||.||||||||.||.||..|||..|||.|||||||||
Sbjct 1182  CAACAGGCTAAATGGTCCAGCCAAGTCACAGGGTGGTGGTAATGAAGCGGATCCCATGGCGAAGAGCAACAGCC  1255

Query 1193  GCCACGAACACAGAAGACAGCCGCACAACGGCTTCCGGCCCAAAAACAAAGGCGGTGCCAAAAATCAAGAGGCT  1266
            ||||.|||||||||||||||||.||.||.||.|||||.||||||||||||||.|||||||||||.||||||||.
Sbjct 1256  GCCATGAACACAGAAGACAGCCACATAATGGTTTCCGTCCCAAAAACAAAGGTGGTGCCAAAAACCAAGAGGCC  1329

Query 1267  TCCTTGGGGATGAAGACCCCCGAGGCCCCGGCCCATTCTGAAAAGCCCCGGCGAAGGCAGCACGCTGCAGACAC  1340
            .|||||||||..|||.||||.||||||||..|.||||||||||||.||||.|||||||||||.||||||||||.
Sbjct 1330  CCCTTGGGGACAAAGGCCCCAGAGGCCCCCCCACATTCTGAAAAGGCCCGTCGAAGGCAGCATGCTGCAGACAA  1403

Query 1341  CTCGGAGGCCAGGCCCTTCCGGGGTAGTGTCGGTAGGGTTTCACAGTGCAATCTCTGCCCCACGAGAATAGAAG  1414
            ||..|||||||||||.||||||||||.|||..||||||||||||||||||||||.||.|||.|.||||||||||
Sbjct 1404  CTTAGAGGCCAGGCCTTTCCGGGGTAATGTTAGTAGGGTTTCACAGTGCAATCTTTGTCCCTCTAGAATAGAAG  1477

Query 1415  TTTCCACAGATGCAGCAGTTCTCTCAGTCCCGGCTGTGACGTTGGTGGCC  1464
            |||||||.||.||..|.||.|||||||||||.||||||||||||||||||
Sbjct 1478  TTTCCACGGAGGCCACGGTCCTCTCAGTCCCCGCTGTGACGTTGGTGGCC  1527

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