Nucleotide Global Alignment

Description

Query:
TRCN0000471007
Subject:
XM_006496218.3
Aligned Length:
1677
Identities:
1279
Gaps:
216

Alignment

Query    1  ATGGCTGAACTCAATACTCATGTGAATGTCAAGGAAAAGATCTATGCAGTTAGATCAGTTGTTCCCAACAAAAG  74
            ||||||||||||||.|||||||||||..||||.||.||||||||.||||||||||||||||||||.||||||||
Sbjct    1  ATGGCTGAACTCAACACTCATGTGAACATCAAAGAGAAGATCTACGCAGTTAGATCAGTTGTTCCGAACAAAAG  74

Query   75  CAATAATGAAATAGTCCTGGTGCTCCAACAGTTTGATTTTAATGTGGATAAAGCCGTGCAAGCCTTTGTGGATG  148
            ||||||||||||.||.|||||.|||||||||||||||||||||||||||||||||||.||.|||||||||||||
Sbjct   75  CAATAATGAAATCGTGCTGGTACTCCAACAGTTTGATTTTAATGTGGATAAAGCCGTACAGGCCTTTGTGGATG  148

Query  149  GCAGTGCAATTCAAGTTCTAAAAGAATGGAATATGACAGGA---AAGAAGAACAATAAAAGAAAAAGAAGCAAG  219
            |||||||.|||||||||||.|||||||||||.|||||.|||   ||||||||.||||||||.||.||||||||.
Sbjct  149  GCAGTGCTATTCAAGTTCTTAAAGAATGGAACATGACGGGAAAGAAGAAGAATAATAAAAGGAAGAGAAGCAAA  222

Query  220  TCCAAGCAGCATCAAGGCAACAAAGATGCTAAAGACAAGGTGGAGAGGCCTGAGGCAGGGCCCCTGCAGCCGCA  293
            ||||||||||||||||||||||||||||||||.|||||||||||||||||.||||..||||||||||||||.||
Sbjct  223  TCCAAGCAGCATCAAGGCAACAAAGATGCTAAGGACAAGGTGGAGAGGCCAGAGGTGGGGCCCCTGCAGCCCCA  296

Query  294  GCCACCACAGATTCAAAACGGCCCCATGAATGGCTGCGAGAAGGACAGCTCGTCCACAGATTCTGCTAACGAAA  367
            |.||||||.|.|.|||||.||.|.|||||||||||||||.|||||||||||.|||.|.||.|||.|.|..||||
Sbjct  297  GGCACCACTGGTACAAAATGGTCACATGAATGGCTGCGAAAAGGACAGCTCATCCCCTGACTCTACCAGAGAAA  370

Query  368  AACCAGCCCTTATCCCTCGTGAGAAAAAGATCTCGATACTTGAGGAACCTTCAAAGGCACTTCGTGGGGTCAC-  440
            |||..|||||.|..||.|||||||||||||||||||||||.|||||||||.|||.|||.|..||||||||||| 
Sbjct  371  AACTGGCCCTCACACCACGTGAGAAAAAGATCTCGATACTGGAGGAACCTCCAAGGGCTCAGCGTGGGGTCACA  444

Query  441  --------------------------------------------------------------------------  440
                                                                                      
Sbjct  445  GAAGGCGGCAGACTACTGCAGCAGAAAATGTCCTTAGATGGGAACCCCAGAGCGATTCATGGACCATCAGAGAG  518

Query  441  --------------------------------------------------------------------------  440
                                                                                      
Sbjct  519  GTCAGATGGCCCACAGTGGTCAGCTGGGCAGCCTTGTAACCCAAGCAAGCCTAAGGCAAAAACATCTCCTGTTA  592

Query  441  ----------------------------------------------------------AGGCCCAAATATTGAG  456
                                                                      ||||||||||||||||
Sbjct  593  AGTCCAATGCCCCTGCAGCTCATCTTGAAATAAAGCCAGATGAGCTGGCAAAGAAAAGAGGCCCAAATATTGAG  666

Query  457  AAATCAGTGAAGGATTTGCAACGCTGCACCGTTTCTCTAACTAGATATCGCGTCATGATTAAGGAAGAAGTGGA  530
            |||||.|||||||||.||||.||||||||.||||||||.||.|||||.|||||||||||.||||||||||||||
Sbjct  667  AAATCGGTGAAGGATCTGCAGCGCTGCACTGTTTCTCTGACGAGATACCGCGTCATGATCAAGGAAGAAGTGGA  740

Query  531  TAGTTCCGTGAAGAAGATCAAAGCTGCCTTTGCTGAATTACACAACTGCATCATTGACAAAGAAGTTTCATTAA  604
            .|||||||||||||||||||||||.||.||||||||..||||||||||||||||||||||||||||||||.|.|
Sbjct  741  CAGTTCCGTGAAGAAGATCAAAGCAGCATTTGCTGAGCTACACAACTGCATCATTGACAAAGAAGTTTCACTGA  814

Query  605  TGGCAGAAATGGATAAAGTTAAAGAAGAAGCCATGGAAATCCTGACTGCTCGTCAGAAGAAAGCAGAAGAACTA  678
            |||||||||||||.|||||||||||||||||||||||.|||||||||||.|||||||||||||||||.||.||.
Sbjct  815  TGGCAGAAATGGACAAAGTTAAAGAAGAAGCCATGGACATCCTGACTGCCCGTCAGAAGAAAGCAGAGGAGCTG  888

Query  679  AAGAGACTCACTGACCTTGCCAGTCAGATGGCAGAGATGCAGCTGGCCGAACTCAGGGCAGAAATTAAGCACTT  752
            ||||||||.||||||||.||||||||||||||||||||||||||||||||||||||.||.||||||||||||||
Sbjct  889  AAGAGACTGACTGACCTAGCCAGTCAGATGGCAGAGATGCAGCTGGCCGAACTCAGAGCTGAAATTAAGCACTT  962

Query  753  TGTCAGCGAGCGTAAATATGACGAGGAGCTCGGGAAAGCTGCCCGGTTTTCCTGTGACATCGAACAGCTGAAGG  826
            |||||||||.||.||.||||||||||||||.|||||.||||||||.||.|||||||||||.|||||.|||||.|
Sbjct  963  TGTCAGCGAACGCAAGTATGACGAGGAGCTGGGGAAGGCTGCCCGCTTCTCCTGTGACATTGAACAACTGAAAG  1036

Query  827  CCCAAATCATGCTCTGCGGAGAAATTACACATCCAAAGAACAACTATTCCTCAAGAACTCCCTGCAGCTCCCTG  900
            ||||||||.||.||||.|||||||||||||||||||||||||.|||.|||||||||||||||||||||||||||
Sbjct 1037  CCCAAATCCTGATCTGTGGAGAAATTACACATCCAAAGAACAGCTACTCCTCAAGAACTCCCTGCAGCTCCCTG  1110

Query  901  CTGCCTCTGCTGAATGCGCACGCAGCAACCTCTGGGAAACAGAGTAACTTTTCCCGAAAATCATCCACTCACAA  974
            ||||||||||||||..|.||.||.|.|.|.||.|||||||||.|.||.|||.||||.||.||||||..||||||
Sbjct 1111  CTGCCTCTGCTGAACACTCATGCGGTAGCTTCCGGGAAACAGGGGAATTTTGCCCGGAAGTCATCCGGTCACAA  1184

Query  975  TAAGCCCTCTGAAGGCAAAGCGGCAAACCCCAAAATGGTGAGCAGTCTCCCCAGCACCGCCGACCCCTCTCACC  1048
            .|||||||||||.||.|||||.|||||||||||||||||||||.|.||..|||.|||.|||||..|.|.|||||
Sbjct 1185  CAAGCCCTCTGAGGGGAAAGCAGCAAACCCCAAAATGGTGAGCGGACTTGCCAACACTGCCGATGCGTGTCACC  1258

Query 1049  AGACCATGCCGGCCAACA---AGCAGAATGGATCTTCTAACCAAAGACGGAGATTTAATCCACAGTATCATAAC  1119
            ||||||||||..|.||||   |||||||||||.||||.|.|||||||||.|||||||||||||||||||   ||
Sbjct 1259  AGACCATGCCCACTAACAAGCAGCAGAATGGACCTTCCAGCCAAAGACGAAGATTTAATCCACAGTATC---AC  1329

Query 1120  AACAGGCTAAATGGGCCTGCCAAGTCGCAGGGCAGTGGGAATGAAGCCGAGCCACTGGGAAAGGGCAACAGCCG  1193
            ||||||||||||||.||.||||||||.|||||..||||.||||||||.||.||..|||..|||.||||||||||
Sbjct 1330  AACAGGCTAAATGGTCCAGCCAAGTCACAGGGTGGTGGTAATGAAGCGGATCCCATGGCGAAGAGCAACAGCCG  1403

Query 1194  CCACGAACACAGAAGACAGCCGCACAACGGCTTCCGGCCCAAAAACAAAGGCGGTGCCAAAAATCAAGAGGCTT  1267
            |||.|||||||||||||||||.||.||.||.|||||.||||||||||||||.|||||||||||.||||||||..
Sbjct 1404  CCATGAACACAGAAGACAGCCACATAATGGTTTCCGTCCCAAAAACAAAGGTGGTGCCAAAAACCAAGAGGCCC  1477

Query 1268  CCTTGGGGATGAAGACCCCCGAGGCCCCGGCCCATTCTGAAAAGCCCCGGCGAAGGCAGCACGCTGCAGACACC  1341
            |||||||||..|||.||||.||||||||..|.||||||||||||.||||.|||||||||||.||||||||||.|
Sbjct 1478  CCTTGGGGACAAAGGCCCCAGAGGCCCCCCCACATTCTGAAAAGGCCCGTCGAAGGCAGCATGCTGCAGACAAC  1551

Query 1342  TCGGAGGCCAGGCCCTTCCGGGGTAGTGTCGGTAGGGTTTCACAGTGCAATCTCTGCCCCACGAGAATAGAAGT  1415
            |..|||||||||||.||||||||||.|||..||||||||||||||||||||||.||.|||.|.|||||||||||
Sbjct 1552  TTAGAGGCCAGGCCTTTCCGGGGTAATGTTAGTAGGGTTTCACAGTGCAATCTTTGTCCCTCTAGAATAGAAGT  1625

Query 1416  TTCCACAGATGCAGCAGTTCTCTCAGTCCCGGCTGTGACGTTGGTGGCC  1464
            ||||||.||.||..|.||.|||||||||||.||||||||||||||||||
Sbjct 1626  TTCCACGGAGGCCACGGTCCTCTCAGTCCCCGCTGTGACGTTGGTGGCC  1674

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