Nucleotide Global Alignment

Description

Query:
TRCN0000471065
Subject:
XM_011542904.2
Aligned Length:
1337
Identities:
696
Gaps:
601

Alignment

Query    1  ATGTTACAGGATCCTGAGAGTGATCAACCTCTGAACAGCCTCGATGTCAAACCCCTGCGCAAACCCCGTATCCC  74
            |||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGTTACAGGATCCTGACAGTGATCAACCTCTGAACAGCCTCGATGTCAAACCCCTGCGCAAACCCCGTATCCC  74

Query   75  CATGGAGACCTTCAGAAAGGTGGGGATCCCCATCATCATAGCACTACTGAGCCTGGCGAGTATCATCATTGTGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CATGGAGACCTTCAGAAAGGTGGGGATCCCCATCATCATAGCACTACTGAGCCTGGCGAGTATCATCATTGTGG  148

Query  149  TTGTCCTCATCAAGGTGATTCTGGATAAATACTACTTCCTCTGCGGGCAGCCTCTCCACTTCATCCCGAGGAAG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TTGTCCTCATCAAGGTGATTCTGGATAAATACTACTTCCTCTGCGGGCAGCCTCTCCACTTCATCCCGAGGAAG  222

Query  223  CAGCTGTGTGACGGAGAGCTGGACTGTCCCTTGGGGGAGGACGAGGAGCACTGTGTCAAGAGCTTCCCCGAAGG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CAGCTGTGTGACGGAGAGCTGGACTGTCCCTTGGGGGAGGACGAGGAGCACTGTGTCAAGAGCTTCCCCGAAGG  296

Query  297  GCCTGCAGTGGCAGTCCGCCTCTCCAAGGACCGATCCACACTGCAGGTGCTGGACTCGGCCACAGGGAACTGGT  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCCTGCAGTGGCAGTCCGCCTCTCCAAGGACCGATCCACACTGCAGGTGCTGGACTCGGCCACAGGGAACTGGT  370

Query  371  TCTCTGCCTGTTTCGACAACTTCACAGAAGCTCTCGCTGAGACAGCCTGTAGGCAGATGGGCTACAGCAGCAAA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCTCTGCCTGTTTCGACAACTTCACAGAAGCTCTCGCTGAGACAGCCTGTAGGCAGATGGGCTACAGCAGCAAA  444

Query  445  CCCACTTTCAGAGCTGTGGAGATTGGCCCAGACCAGGATCTGGATGTTGTTGAAATCACAGAAAACAGCCAGGA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CCCACTTTCAGAGCTGTGGAGATTGGCCCAGACCAGGATCTGGATGTTGTTGAAATCACAGAAAACAGCCAGGA  518

Query  519  GCTTCGCATGCGGAACTCAAGTGGGCCCTGTCTCTCAGGCTCCCTGGTCTCCCTGCACTGTCTTGCCTGTGGGA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCTTCGCATGCGGAACTCAAGTGGGCCCTGTCTCTCAGGCTCCCTGGTCTCCCTGCACTGTCTTGCCTGTGGGA  592

Query  593  AGAGCCTGA-------AGACCCCCCGTG--TGGTGGGTGGGGAGGAGGC----CTCTG-----TGGAT-TCTTG  647
            | ..||.||       |||..|||.|.|  ||      ||||...||||    |.|||     ||.|| |.|.|
Sbjct  593  A-TTCCAGAGAAAGGGAGATTCCCAGGGACTG------GGGGCCCAGGCTAAACACTGAAAAATGCATCTGTAG  659

Query  648  GCCTTGGCAGGTCAGCATCCAGTACGACAAACAGCACGTCTGTGGAGGGAGCATCCTG----GACCCCCACTGG  717
            ||               ||.||.|.|| |||...||.||||||            |||    |.||.||||   
Sbjct  660  GC---------------TCAAGGAGGA-AAAGCCCATGTCTGT------------CTGTCTTGCCCACCAC---  702

Query  718  GTC-CTCACGGCAGCC--CACTGCTTCAGGAAACATACCGATGTGTTCAACTGGAAGGTGCGGGCAGGCTCAGA  788
             || |||.|.|||.||  ||||||..|||||.|.|.|.|          |||                 |.|.|
Sbjct  703  -TCTCTCCCAGCACCCAGCACTGCCCCAGGACAGAGAGC----------ACT-----------------TGACA  748

Query  789  CAAACTGGGCAGCTTCCCATCCCTGGCTGTGGCCAAGATCATCATCATTGAATTCAACCCCATGTACCCCAAAG  862
            |||..|||..||.|                                                            
Sbjct  749  CAAGTTGGTTAGAT------------------------------------------------------------  762

Query  863  ACAATGACATCGCCCTCATGAAGCTGCAGTTCCCACTCACTTTCTCAGGCACAGTCAGGCCCATCTGTCTGCCC  936
                                                                                      
Sbjct  763  --------------------------------------------------------------------------  762

Query  937  TTCTTTGATGAGGAGCTCACTCCAGCCACCCCACTCTGGATCATTGGATGGGGCTTTACGAAGCAGAATGGAGG  1010
                                                                                      
Sbjct  763  --------------------------------------------------------------------------  762

Query 1011  GAAGATGTCTGACATACTGCTGCAGGCGTCAGTCCAGGTCATTGACAGCACACGGTGCAATGCAGACGATGCGT  1084
                                                                                      
Sbjct  763  --------------------------------------------------------------------------  762

Query 1085  ACCAGGGGGAAGTCACCGAGAAGATGATGTGTGCAGGCATCCCGGAAGGGGGTGTGGACACCTGCCAGGGTGAC  1158
                                                                                      
Sbjct  763  --------------------------------------------------------------------------  762

Query 1159  AGTGGTGGGCCCCTGATGTACCAATCTGACCAGTGGCATGTGGTGGGCATCGTTAGCTGGGGCTATGGCTGCGG  1232
                                                                                      
Sbjct  763  --------------------------------------------------------------------------  762

Query 1233  GGGCCCGAGCACCCCAGGAGTATACACCAAGGTCTCAGCCTATCTCAACTGGATCTACAATGTCTGGAAGGCTG  1306
                                                                                      
Sbjct  763  --------------------------------------------------------------------------  762

Query 1307  AGCTG  1311
                 
Sbjct  763  -----  762