Nucleotide Global Alignment
Description
- Query:
- TRCN0000471116
- Subject:
- NR_158766.1
- Aligned Length:
- 4866
- Identities:
- 2372
- Gaps:
- 2421
Alignment
Query 1 ATGCCGGTCCGGAAGCAAGATACCCAGAGAGCATTGCACCTTTTGGAGGAATATCGTTCAAAACTAAGCCAAAC 74
.||||..|||.||
Sbjct 1 -------------------------------------------------------ATTCACCACTCAG------ 13
Query 75 TGAAGACAGACAGCT----CAGAAGTTCCATAGAA--CGGGTTATTAACATATTTCAGAGCAACCTCTTTCAGG 142
||||| .|||||| || |.|.|| .||||||.|.|.||||
Sbjct 14 ----------CAGCTGGTAGAGAAGT-------AAGCCTGCTT---------------GGCAACCACCTGCAGG 55
Query 143 CTTTAATAGATATTCAAGAATTTTATGAAGTGACCTTACTGGATAATCCAAAA----TGTATAGATCGTTCAAA 212
..|..|.|||| ||||| ||.||...|||.| |||.| |.|||| |..||...
Sbjct 56 GCTGCAGAGAT------GAATT----------ACATTTTCGGAAA---CAACACACTTCTATA---CTCTCGCG 107
Query 213 GCCGTCTGAACCAATTCAACCTGTGAATACTTGGGAGATTTCCAGCCTTCCAAGCTCTACTGTGACTTCAGAGA 286
||.||| || |||| ||..|.|.|||||| ||.
Sbjct 108 GCAGTC-GA------------------------GGAG-------GCAATACTAGCTCT-------------AGC 136
Query 287 CACTGCCAAGCAGCCTTAGCCCTAGTGTAG-AGAAATACAGG-------------TATCAGGATGAAGATACAC 346
||..||..||||| ||||.| || |||||.||.|| ..||| ||||||
Sbjct 137 CATGGCTCAGCAG-----GCCCAA----AGCAGAAACACTGGGCAAAAAAGGGCTCGTCA-GATGAA------- 193
Query 347 CTCCT-CAA---GAGCATATTTCCCCACAA--ATCACAAATGAAG-TGATAGGTCCAGAATTGGTTCATGTCTC 413
|| ||| ||| |||.|| .||||....|.|| .|||||.|.|| |..|||| |||
Sbjct 194 ---CTGCAAGCTGAG---------CCAGAACCTTCACGCTGGCAGCAGATAGTTGCA----TTTTTCA---CTC 248
Query 414 AGAGAAGAACTTATCAGAGATTGA--GAATGTCCATGGATTTGTTTCTCATT---------CTCATATTTCACC 476
||||| ||.||.||.| ||.|| || ||||..| ||| ||||
Sbjct 249 ---GAAGA------CACAGCTTTATTGACTG--CA----------TCTCGGTAGCCACCAGCTC------CACC 295
Query 477 AATAAAGGCAAATCCTCCCCCAGTACTGGTCAACACAGATAGCTTGAAAACACCAACTTACGTTAATGGCACAG 550
.|||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 296 ----CAGGCAAATCCTCCCCCAGTACTGGTCAACACAGATAGCTTGGAAACACCAACTTACGTTAATGGCACAG 365
Query 551 ATGCAGATTATGAATATGAAGAAATCACACTTGAAAGGGGAAATTCAGGGCTTGGTTTCAGCATTGCAG--AGT 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| .||
Sbjct 366 ATGCAGATTATGAATATGAAGAAATCACACTTGAAAGGGGAAATTCAGGGCTTGGTTTCAGCATTGCAGGAGGT 439
Query 623 ACGGACAACCCACACATTGGAGATGACTCAAGTATTTTCATTACCAAAATTATCACA-GGGGAGCAGCCGCCCA 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 440 ACGGACAACCCACACATTGGAGATGACTCAAGTATTTTCATTACCAAAATTATCACAGGGGGAGCAGCCGCCCA 513
Query 696 AGATGGGAAGATTGCGGGTCAATGACTGTATATTACAAGTAAATGAAGTAGATGTTCGTGATGTAACACATAGC 769
|||| |||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 514 AGAT-GGAAGATTGCGGGTCAATGACTGTATATTACGAGTAAATGAAGTAGATGTTCGTGATGTAACACATAGC 586
Query 770 AAAGCAGTTGAAGCGTTGAAAGAAGCAGGGTCTATTGTACGCTTGTATGTAAAAAGAAGGAAACCAGTGTCAGA 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 587 AAAGCAGTTGAAGCGTTGAAAGAAGCAGGGTCTATTGTACGCTTGTATGTAAAAAGAAGGAAACCAGTGTCAGA 660
Query 844 AAAAATAATGGAAATAAAGCTCATTAAAGGTCCTAAAGGTCTTGGGTTTAGCATTGCTGGAGGTGTTGGAAATC 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 AAAAATAATGGAAATAAAGCTCATTAAAGGTCCTAAAGGTCTTGGGTTTAGCATTGCTGGAGGTGTTGGAAATC 734
Query 918 AGCATATTCCTGGGGATAATAGCATCTATGTAACCAAAATAATTGAAGGAGGTGCAGCACATAAGGATGGCAAA 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 735 AGCATATTCCTGGGGATAATAGCATCTATGTAACCAAAATAATTGAAGGAGGTGCAGCACATAAGGATGGCAAA 808
Query 992 CTTCAGATTGGAGATAAACTTTTAGCAGTGAATAACGTATGTTTAGAAGAAGTTACTCATGAAGAAGCAGTAAC 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 809 CTTCAGATTGGAGATAAACTTTTAGCAGTGAATAACGTATGTTTAGAAGAAGTTACTCATGAAGAAGCAGTAAC 882
Query 1066 TGCCTTAAAGAACACATCTGATTTTGTTTATTTGAAAGTGGCAAAACCCACAAGTATGTATATGAATGATGGCT 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 883 TGCCTTAAAGAACACATCTGATTTTGTTTATTTGAAAGTGGCAAAACCCACAAGTATGTATATGAATGATGGCT 956
Query 1140 ATGCACCACCTGATATCACCAACTCTTCTTCTCAGCCTGTTGATAACCATGTTAGCCCATCTTCCTTCTTGGGC 1213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 957 ATGCACCACCTGATATCACCAACTCTTCTTCTCAGCCTGTTGATAACCATGTTAGCCCATCTTCCTTCTTGGGC 1030
Query 1214 CAGACACCAGCATCTCCAGCCAGATACTCCCCAGTTTCTAAAGCAGTACTTGGAGATGATGAAATTACAAGGGA 1287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1031 CAGACACCAGCATCTCCAGCCAGATACTCCCCAGTTTCTAAAGCAGTACTTGGAGATGATGAAATTACAAGGGA 1104
Query 1288 ACCTAGAAAAGTTGTTCTTCATCGTGGCTCAACGGGCCTTGGTTTCAACATTGTAGGAGGAGAAGATGGAGAAG 1361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1105 ACCTAGAAAAGTTGTTCTTCATCGTGGCTCAACGGGCCTTGGTTTCAACATTGTAGGAGGAGAAGATGGAGAAG 1178
Query 1362 GAATATTTATTTCCTTTATCTTAGCCGGAGGACCTGCTGATCTAAGTGGAGAGCTCAGAAAAGGAGATCGTATT 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1179 GAATATTTATTTCCTTTATCTTAGCCGGAGGACCTGCTGATCTAAGTGGAGAGCTCAGAAAAGGAGATCGTATT 1252
Query 1436 ATATCGGTAAACAGTGTTGACCTCAGAGCTGCTAGTCATGAGCAGGCAGCAGCTGCATTGAAAAATGCTGGCCA 1509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1253 ATATCGGTAAACAGTGTTGACCTCAGAGCTGCTAGTCATGAGCAGGCAGCAGCTGCATTGAAAAATGCTGGCCA 1326
Query 1510 GGCTGTCACAATTGTTGCACAATATCGACCTGAAGAATACAGTCGTTTTGAAGCTAAAATACATGATTTACGGG 1583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1327 GGCTGTCACAATTGTTGCACAATATCGACCTGAAGAATACAGTCGTTTTGAAGCTAAAATACATGATTTACGGG 1400
Query 1584 AGCAGATGATGAATAGTAGTATTAGTTCAGGGTCAGGTTCTCTTCGAACTAGCCAGAAGCGATCCCTCTATGTC 1657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1401 AGCAGATGATGAATAGTAGTATTAGTTCAGGGTCAGGTTCTCTTCGAACTAGCCAGAAGCGATCCCTCTATGTC 1474
Query 1658 AGAGCCCTTTTTGATTATGACAAGACTAAAGACAGTGGGCTTCCCAGTCAGGGACTGAACTTCAAATTTGGAGA 1731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1475 AGAGCCCTTTTTGATTATGACAAGACTAAAGACAGTGGGCTTCCCAGTCAGGGACTGAACTTCAAATTTGGAGA 1548
Query 1732 TATCCTCCATGTTATTAATGCTTCTGATGATGAATGGTGGCAAGCCAGGCAGGTTACACCAGATGGTGAGAGCG 1805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1549 TATCCTCCATGTTATTAATGCTTCTGATGATGAATGGTGGCAAGCCAGGCAGGTTACACCAGATGGTGAGAGCG 1622
Query 1806 ATGAGGTCGGAGTGATTCCCAGTAAACGCAGAGTTGAGAAGAAAGAACGAGCCCGATTAAAAACAGTGAAATTC 1879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1623 ATGAGGTCGGAGTGATTCCCAGTAAACGCAGAGTTGAGAAGAAAGAACGAGCCCGATTAAAAACAGTGAAATTC 1696
Query 1880 AATTCTAAAACGAGAGATAAAGGGCAGTCATTCAATGACAAGCGTAAAAAGAACCTCTTTTCCCGAAAATTCCC 1953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1697 AATTCTAAAACGAGAGATAAAGGGCAGTCATTCAATGACAAGCGTAAAAAGAACCTCTTTTCCCGAAAATTCCC 1770
Query 1954 CTTCTACAAGAACAAGGACCAGAGTGAGCAGGAAACAAGTGATGCTCAC------------------------- 2002
||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 1771 CTTCTACAAGAACAAGGACCAGAGTGAGCAGGAAACAAGTGATGCTGACCGAGATCCCTGACGACATGGGATCA 1844
Query 2003 ---------AAGTATGTA-----TA-------------TGAA----------------TGATGGCTATGCACCA 2033
|||.||||| || |||| |||| || ||
Sbjct 1845 AAAGGCCTGAAGCATGTAACTTCTAATGCCAGCGATAGTGAAAGTAGTTACCTAATCTTGAT---TA-----CA 1910
Query 2034 CCTGA-TAT-----CACCAACTGTGGTCAAGAAGAATACGTCTTATCTTATGAACCAGTGAATCAACAAGAAGT 2101
..||| ||| |.|.||..||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1911 GATGAGTATGGCTGCTCAAAAGGTGGTCAAGAAGAATACGTCTTATCTTATGAACCAGTGAATCAACAAGAAGT 1984
Query 2102 TAATTATACTCGACCAGTGATCATATTGGGACCTATGAAAGACAGGATAAATGATGACTTGATCTCAGAATTTC 2175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1985 TAATTATACTCGACCAGTGATCATATTGGGACCTATGAAAGACAGGATAAATGATGACTTGATCTCAGAATTTC 2058
Query 2176 CTGACAAATTTGGATCCTGTGTTCCTCATACAACTAGACCAAAACGAGATTATGAGGTAGATGGAAGAGATTAT 2249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2059 CTGACAAATTTGGATCCTGTGTTCCTCATACAACTAGACCAAAACGAGATTATGAGGTAGATGGAAGAGATTAT 2132
Query 2250 CATTTTGTGACTTCAAGAGAGCAGATGGAAAAAGATATCCAGGAACATAAATTCATTGAAGCTGGCCAGTATAA 2323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2133 CATTTTGTGACTTCAAGAGAGCAGATGGAAAAAGATATCCAGGAACATAAATTCATTGAAGCTGGCCAGTATAA 2206
Query 2324 CAATCATCTATATGGAACAAGTGTTCAGTCTGTACGAGAAGTAGCAGAAAAGGGCAAACACTGTATCCTTGATG 2397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2207 CAATCATCTATATGGAACAAGTGTTCAGTCTGTACGAGAAGTAGCAGAAAAGGGCAAACACTGTATCCTTGATG 2280
Query 2398 TGTCTGGAAATGCCATAAAGAGATTACAGATTGCACAGCTTTACCCTATCTCCATTTTTATTAAACCCAAATCC 2471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2281 TGTCTGGAAATGCCATAAAGAGATTACAGATTGCACAGCTTTACCCTATCTCCATTTTTATTAAACCCAAATCC 2354
Query 2472 ATGGAAAATATCATGGAAATGAATAAGCGTCTAACAGAAGAACAAGCCAGAAAAACATTTGAGAGAGCCATGAA 2545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2355 ATGGAAAATATCATGGAAATGAATAAGCGTCTAACAGAAGAACAAGCCAGAAAAACATTTGAGAGAGCCATGAA 2428
Query 2546 ACTGGAACAGGAGTTTACTGAACATTTCACAGCTATTGTACAGGGGGATACGCTGGAAGACATTTACAACCAAG 2619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2429 ACTGGAACAGGAGTTTACTGAACATTTCACAGCTATTGTACAGGGGGATACGCTGGAAGACATTTACAACCAAG 2502
Query 2620 TGAAACAGATCATAGAAGAACAATCTGGTTCTTACATCTGGGTTCCGGCAAAAGAAAAGCTA------------ 2681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2503 TGAAACAGATCATAGAAGAACAATCTGGTTCTTACATCTGGGTTCCGGCAAAAGAAAAGCTATGAAAACTCATG 2576
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 2577 TTTCTCTGTTTCTCTTTTCCACAATTCCATTTTCTTTGGCATCTCTTTGCCCTTTCCTCTGGAGTCTTTCTTGA 2650
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 2651 GTACTGATTTCATGTTGAATTGTATCCCACACATCATGGTCTGCAGCTTCTTTTTCACATGTAGTGTCTCCTTC 2724
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 2725 AAGTTACATCGTGTGTATTATTTAATGTCACTATTGGTTAGTGGCCATTTTTCAGAACTGAAGATGGAATGGCC 2798
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 2799 TGACCAGCTATTAAGAACGTGGGGAGACGCAGAAATTGTGGTAAAATTCCTTAATGTTTAAGGGAAAGTAACTT 2872
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 2873 TAAGAGATTTTTGGAAAAGCTTTATATACATTCTTTTCAAATTTCAGTACAAATGAAAAAGTGGTTTTAATCAG 2946
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 2947 TGATTTAGTAGACTTTGAGCAACTGTGCACGCTTCAGTTTAATAGCATGGTTTGGCCAGTGTATTACTCTCAAG 3020
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3021 TCCTTTTCTCAATCAACTTCTATCATCAAAGCAATTGTTTCATTATAGATAAATAAGGACATTTTTTAATTTAA 3094
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3095 AAATTCATGTCTGAGTTGACTTTCATAAGGGATTTCATTTTTTCCTCAACATTCTTAAAGCCTTTTAGTATTTG 3168
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3169 ACGGTTCTTTTTTCCCAGGACATTTGCTAGGAATAACAACGTTTCAATGTTTTTAATCTACTTGAGCAACACTA 3242
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3243 TCGTGTCTTACAAAAGTTGTTCATATGTAAATGATCATCACATTTCGTGAATTGAGGCCATGTTCAGGTGCTAA 3316
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3317 GGAAGTTCGCCTTTTACACAGAAGATTGAGAAAATTTCCTAGATATAAATACAGATAAATCAGACGTTACAGTG 3390
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3391 GTGACGTAGTAACCATCATGGCAATGGAAAGGAGTCCAATTCATAGCCTAAAACTTCAAATGTATTCTTAGGAG 3464
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3465 TCAGATTTTACTGAATATTTTACCCACAATAGCTGCCTATTTTGTTATAATAAAATATATATAAATATATATAT 3538
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3539 AAAACTTTCTTTAAACTGTAACTATGGGAATTATTTTCTTTACATAGTTGCGCACACACACAAACATATATATA 3612
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3613 TATTTAAAATATATTTTGTTTCTTTTGCCACCTACTCCTAACTTTTTGTTTGGTTTTTAAATTAAATATTAATT 3686
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3687 GAATAGACTTATCTTCCTTAATCATGTGAACTGAAAATGGGGGCATGGTGGTCATGAGGAGGAAACATTTAGGG 3760
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3761 AAATTAGATTATAAGTAAAAGTGTGGGCATATTCTCCTCTTTTCTACAAAGGTTTTCAAATGGTTCCTGAGGTT 3834
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3835 TTTTGTTGTTGTCCGTGTTGTTACTGTTGTTCTTGTCATCAGGTTTGATTTTGGTCCTTGCCCTTTCCTTCTAG 3908
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3909 TTCTCCTTTTATTAATAGGAAGGCAGGCAAAAGCCCCATTTATGTGTGTGTTTTCCCCTCAGACAGCTTTCATC 3982
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3983 CACTGCTCTGCACTAGAATTGCACAAATCTTCATGGTGAGCAATTTTAAGAAATGTTAGTGAAAGGTAGAAATT 4056
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 4057 ATTTCACAAATCAGTTTCTCTGGTCCTTCATATTAATAATAATATTTGGCTTCCCATTGCTCTTTGGAGTTGTT 4130
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 4131 TATTAAATATGTGTTTTTGACAACCTCCTCATTAGTTTCTTAAATGAGTACTGGTTTGTAAAGAATTATCAACA 4204
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 4205 TTATCCATTCCATTTATGAAGAAGAGGAGAACAGCTAATAAACTGTATTGTAAAATCCATATGTTAAGTGTGTC 4278
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 4279 TTGAATTTTGAAAGAAAAAATATATTTTGCAAGCTAACATTTTCTTGAAACAATTTGAGGCATCATGTAACTTA 4352
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 4353 TAACCGAATCCAAGAGCCGTTAGGCAGCAGAGTGTGTTACCACATTGAAATACACAGTGCTGCTGTTAGACTAA 4426
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 4427 ATGTCGTAGGTTGTTAACCACATAGAAACACACTAGTATGAAGAAAACTGTTGTAAAATCTCAAGAGCTTCAGA 4500
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 4501 AACTGCCTTACAAGACCGCAGCATAAGCTATTTTGAAGTATTTACCAAATAGTCACATGTTGTAAAATATCAAG 4574
Query 2682 -------------------------------------------------------- 2681
Sbjct 4575 TGGTTATAAAAGGATGCCATTTATATATTAAAATTTACATAACATTGTTTTCTGGA 4630
