Nucleotide Global Alignment
Description
- Query:
- TRCN0000471116
- Subject:
- NR_158767.1
- Aligned Length:
- 4866
- Identities:
- 2369
- Gaps:
- 2424
Alignment
Query 1 ATGCCGGTCCGGAAGCAAGATACCCAGAGAGCATTGCACCTTTTGGAGGAATATCGTTCAAAACTAAGCCAAAC 74
.||||..|||.||
Sbjct 1 -------------------------------------------------------ATTCACCACTCAG------ 13
Query 75 TGAAGACAGACAGCT----CAGAAGTTCCATAGAA--CGGGTTATTAACATATTTCAGAGCAACCTCTTTCAGG 142
||||| .|||||| || |.|.|| .||||||.|.|.||||
Sbjct 14 ----------CAGCTGGTAGAGAAGT-------AAGCCTGCTT---------------GGCAACCACCTGCAGG 55
Query 143 CTTTAATAGATATTCAAGAATTTTATGAAGTGACCTTACTGGATAATCCAAAA----TGTATAGATCGTTCAAA 212
..|..|.|||| ||||| ||.||...|||.| |||.| |.|||| |..||...
Sbjct 56 GCTGCAGAGAT------GAATT----------ACATTTTCGGAAA---CAACACACTTCTATA---CTCTCGCG 107
Query 213 GCCGTCTGAACCAATTCAACCTGTGAATACTTGGGAGATTTCCAGCCTTCCAAGCTCTACTGTGACTTCAGAGA 286
||.||| || |||| ||..|.|.|||||| ||.
Sbjct 108 GCAGTC-GA------------------------GGAG-------GCAATACTAGCTCT-------------AGC 136
Query 287 CACTGCCAAGCAGCCTTAGCCCTAGTGTAG-AGAAATACAGG-------------TATCAGGATGAAGATACAC 346
||..||..||||| ||||.| || |||||.||.|| ..||| ||||||
Sbjct 137 CATGGCTCAGCAG-----GCCCAA----AGCAGAAACACTGGGCAAAAAAGGGCTCGTCA-GATGAA------- 193
Query 347 CTCCT-CAA---GAGCATATTTCCCCACAA--ATCACAAATGAAG-TGATAGGTCCAGAATTGGTTCATGTCTC 413
|| ||| ||| |||.|| .||||....|.|| .|||||.|.|| |..|||| |||
Sbjct 194 ---CTGCAAGCTGAG---------CCAGAACCTTCACGCTGGCAGCAGATAGTTGCA----TTTTTCA---CTC 248
Query 414 AGAGAAGAACTTATCAGAGATTGA--GAATGTCCATGGATTTGTTTCTCATT---------CTCATATTTCACC 476
||||| ||.||.||.| ||.|| || ||||..| ||| ||||
Sbjct 249 ---GAAGA------CACAGCTTTATTGACTG--CA----------TCTCGGTAGCCACCAGCTC------CACC 295
Query 477 AATAAAGGCAAATCCTCCCCCAGTACTGGTCAACACAGATAGCTTGAAAACACCAACTTACGTTAATGGCACAG 550
.|||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 296 ----CAGGCAAATCCTCCCCCAGTACTGGTCAACACAGATAGCTTGGAAACACCAACTTACGTTAATGGCACAG 365
Query 551 ATGCAGATTATGAATATGAAGAAATCACACTTGAAAGGGGAAATTCAGGGCTTGGTTTCAGCATTGCAG--AGT 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| .||
Sbjct 366 ATGCAGATTATGAATATGAAGAAATCACACTTGAAAGGGGAAATTCAGGGCTTGGTTTCAGCATTGCAGGAGGT 439
Query 623 ACGGACAACCCACACATTGGAGATGACTCAAGTATTTTCATTACCAAAATTATCACA-GGGGAGCAGCCGCCCA 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 440 ACGGACAACCCACACATTGGAGATGACTCAAGTATTTTCATTACCAAAATTATCACAGGGGGAGCAGCCGCCCA 513
Query 696 AGATGGGAAGATTGCGGGTCAATGACTGTATATTACAAGTAAATGAAGTAGATGTTCGTGATGTAACACATAGC 769
|||| |||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 514 AGAT-GGAAGATTGCGGGTCAATGACTGTATATTACGAGTAAATGAAGTAGATGTTCGTGATGTAACACATAGC 586
Query 770 AAAGCAGTTGAAGCGTTGAAAGAAGCAGGGTCTATTGTACGCTTGTATGTAAAAAGAAGGAAACCAGTGTCAGA 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 587 AAAGCAGTTGAAGCGTTGAAAGAAGCAGGGTCTATTGTACGCTTGTATGTAAAAAGAAGGAAACCAGTGTCAGA 660
Query 844 AAAAATAATGGAAATAAAGCTCATTAAAGGTCCTAAAGGTCTTGGGTTTAGCATTGCTGGAGGTGTTGGAAATC 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 AAAAATAATGGAAATAAAGCTCATTAAAGGTCCTAAAGGTCTTGGGTTTAGCATTGCTGGAGGTGTTGGAAATC 734
Query 918 AGCATATTCCTGGGGATAATAGCATCTATGTAACCAAAATAATTGAAGGAGGTGCAGCACATAAGGATGGCAAA 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 735 AGCATATTCCTGGGGATAATAGCATCTATGTAACCAAAATAATTGAAGGAGGTGCAGCACATAAGGATGGCAAA 808
Query 992 CTTCAGATTGGAGATAAACTTTTAGCAGTGAATAACGTATGTTTAGAAGAAGTTACTCATGAAGAAGCAGTAAC 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 809 CTTCAGATTGGAGATAAACTTTTAGCAGTGAATAACGTATGTTTAGAAGAAGTTACTCATGAAGAAGCAGTAAC 882
Query 1066 TGCCTTAAAGAACACATCTGATTTTGTTTATTTGAAAGTGGCAAAACCCACAAGTATGTATATGAATGATGGCT 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 883 TGCCTTAAAGAACACATCTGATTTTGTTTATTTGAAAGTGGCAAAACCCACAAGTATGTATATGAATGATGGCT 956
Query 1140 ATGCACCACCTGATATCACCAACTCTTCTTCTCAGCCTGTTGATAACCATGTTAGCCCATCTTCCTTCTTGGGC 1213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 957 ATGCACCACCTGATATCACCAACTCTTCTTCTCAGCCTGTTGATAACCATGTTAGCCCATCTTCCTTCTTGGGC 1030
Query 1214 CAGACACCAGCATCTCCAGCCAGATACTCCCCAGTTTCTAAAGCAGTACTTGGAGATGATGAAATTACAAGGGA 1287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1031 CAGACACCAGCATCTCCAGCCAGATACTCCCCAGTTTCTAAAGCAGTACTTGGAGATGATGAAATTACAAGGGA 1104
Query 1288 ACCTAGAAAAGTTGTTCTTCATCGTGGCTCAACGGGCCTTGGTTTCAACATTGTAGGAGGAGAAGATGGAGAAG 1361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1105 ACCTAGAAAAGTTGTTCTTCATCGTGGCTCAACGGGCCTTGGTTTCAACATTGTAGGAGGAGAAGATGGAGAAG 1178
Query 1362 GAATATTTATTTCCTTTATCTTAGCCGGAGGACCTGCTGATCTAAGTGGAGAGCTCAGAAAAGGAGATCGTATT 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1179 GAATATTTATTTCCTTTATCTTAGCCGGAGGACCTGCTGATCTAAGTGGAGAGCTCAGAAAAGGAGATCGTATT 1252
Query 1436 ATATCGGTAAACAGTGTTGACCTCAGAGCTGCTAGTCATGAGCAGGCAGCAGCTGCATTGAAAAATGCTGGCCA 1509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1253 ATATCGGTAAACAGTGTTGACCTCAGAGCTGCTAGTCATGAGCAGGCAGCAGCTGCATTGAAAAATGCTGGCCA 1326
Query 1510 GGCTGTCACAATTGTTGCACAATATCGACCTGAAGAATACAGTCGTTTTGAAGCTAAAATACATGATTTACGGG 1583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1327 GGCTGTCACAATTGTTGCACAATATCGACCTGAAGAATACAGTCGTTTTGAAGCTAAAATACATGATTTACGGG 1400
Query 1584 AGCAGATGATGAATAGTAGTATTAGTTCAGGGTCAGGTTCTCTTCGAACTAGCCAGAAGCGATCCCTCTATGTC 1657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1401 AGCAGATGATGAATAGTAGTATTAGTTCAGGGTCAGGTTCTCTTCGAACTAGCCAGAAGCGATCCCTCTATGTC 1474
Query 1658 AGAGCCCTTTTTGATTATGACAAGACTAAAGACAGTGGGCTTCCCAGTCAGGGACTGAACTTCAAATTTGGAGA 1731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1475 AGAGCCCTTTTTGATTATGACAAGACTAAAGACAGTGGGCTTCCCAGTCAGGGACTGAACTTCAAATTTGGAGA 1548
Query 1732 TATCCTCCATGTTATTAATGCTTCTGATGATGAATGGTGGCAAGCCAGGCAGGTTACACCAGATGGTGAGAGCG 1805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1549 TATCCTCCATGTTATTAATGCTTCTGATGATGAATGGTGGCAAGCCAGGCAGGTTACACCAGATGGTGAGAGCG 1622
Query 1806 ATGAGGTCGGAGTGATTCCCAGTAAACGCAGAGTTGAGAAGAAAGAACGAGCCCGATTAAAAACAGTGAAATTC 1879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1623 ATGAGGTCGGAGTGATTCCCAGTAAACGCAGAGTTGAGAAGAAAGAACGAGCCCGATTAAAAACAGTGAAATTC 1696
Query 1880 AATTCTAAAACGAGAGATAAAGGGCAGTCATTCAATGACAAGCGTAAAAAGAACCTCTTTTCCCGAAAATTCCC 1953
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1697 AATTCTAAAACGAGAGATAAAGG---GTCATTCAATGACAAGCGTAAAAAGAACCTCTTTTCCCGAAAATTCCC 1767
Query 1954 CTTCTACAAGAACAAGGACCAGAGTGAGCAGGAAACAAGTGATGCTCAC------------------------- 2002
||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 1768 CTTCTACAAGAACAAGGACCAGAGTGAGCAGGAAACAAGTGATGCTGACCGAGATCCCTGACGACATGGGATCA 1841
Query 2003 ---------AAGTATGTA-----TA-------------TGAA----------------TGATGGCTATGCACCA 2033
|||.||||| || |||| |||| || ||
Sbjct 1842 AAAGGCCTGAAGCATGTAACTTCTAATGCCAGCGATAGTGAAAGTAGTTACCTAATCTTGAT---TA-----CA 1907
Query 2034 CCTGA-TAT-----CACCAACTGTGGTCAAGAAGAATACGTCTTATCTTATGAACCAGTGAATCAACAAGAAGT 2101
..||| ||| |.|.||..||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1908 GATGAGTATGGCTGCTCAAAAGGTGGTCAAGAAGAATACGTCTTATCTTATGAACCAGTGAATCAACAAGAAGT 1981
Query 2102 TAATTATACTCGACCAGTGATCATATTGGGACCTATGAAAGACAGGATAAATGATGACTTGATCTCAGAATTTC 2175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1982 TAATTATACTCGACCAGTGATCATATTGGGACCTATGAAAGACAGGATAAATGATGACTTGATCTCAGAATTTC 2055
Query 2176 CTGACAAATTTGGATCCTGTGTTCCTCATACAACTAGACCAAAACGAGATTATGAGGTAGATGGAAGAGATTAT 2249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2056 CTGACAAATTTGGATCCTGTGTTCCTCATACAACTAGACCAAAACGAGATTATGAGGTAGATGGAAGAGATTAT 2129
Query 2250 CATTTTGTGACTTCAAGAGAGCAGATGGAAAAAGATATCCAGGAACATAAATTCATTGAAGCTGGCCAGTATAA 2323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2130 CATTTTGTGACTTCAAGAGAGCAGATGGAAAAAGATATCCAGGAACATAAATTCATTGAAGCTGGCCAGTATAA 2203
Query 2324 CAATCATCTATATGGAACAAGTGTTCAGTCTGTACGAGAAGTAGCAGAAAAGGGCAAACACTGTATCCTTGATG 2397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2204 CAATCATCTATATGGAACAAGTGTTCAGTCTGTACGAGAAGTAGCAGAAAAGGGCAAACACTGTATCCTTGATG 2277
Query 2398 TGTCTGGAAATGCCATAAAGAGATTACAGATTGCACAGCTTTACCCTATCTCCATTTTTATTAAACCCAAATCC 2471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2278 TGTCTGGAAATGCCATAAAGAGATTACAGATTGCACAGCTTTACCCTATCTCCATTTTTATTAAACCCAAATCC 2351
Query 2472 ATGGAAAATATCATGGAAATGAATAAGCGTCTAACAGAAGAACAAGCCAGAAAAACATTTGAGAGAGCCATGAA 2545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2352 ATGGAAAATATCATGGAAATGAATAAGCGTCTAACAGAAGAACAAGCCAGAAAAACATTTGAGAGAGCCATGAA 2425
Query 2546 ACTGGAACAGGAGTTTACTGAACATTTCACAGCTATTGTACAGGGGGATACGCTGGAAGACATTTACAACCAAG 2619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2426 ACTGGAACAGGAGTTTACTGAACATTTCACAGCTATTGTACAGGGGGATACGCTGGAAGACATTTACAACCAAG 2499
Query 2620 TGAAACAGATCATAGAAGAACAATCTGGTTCTTACATCTGGGTTCCGGCAAAAGAAAAGCTA------------ 2681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2500 TGAAACAGATCATAGAAGAACAATCTGGTTCTTACATCTGGGTTCCGGCAAAAGAAAAGCTATGAAAACTCATG 2573
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 2574 TTTCTCTGTTTCTCTTTTCCACAATTCCATTTTCTTTGGCATCTCTTTGCCCTTTCCTCTGGAGTCTTTCTTGA 2647
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 2648 GTACTGATTTCATGTTGAATTGTATCCCACACATCATGGTCTGCAGCTTCTTTTTCACATGTAGTGTCTCCTTC 2721
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 2722 AAGTTACATCGTGTGTATTATTTAATGTCACTATTGGTTAGTGGCCATTTTTCAGAACTGAAGATGGAATGGCC 2795
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 2796 TGACCAGCTATTAAGAACGTGGGGAGACGCAGAAATTGTGGTAAAATTCCTTAATGTTTAAGGGAAAGTAACTT 2869
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 2870 TAAGAGATTTTTGGAAAAGCTTTATATACATTCTTTTCAAATTTCAGTACAAATGAAAAAGTGGTTTTAATCAG 2943
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 2944 TGATTTAGTAGACTTTGAGCAACTGTGCACGCTTCAGTTTAATAGCATGGTTTGGCCAGTGTATTACTCTCAAG 3017
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3018 TCCTTTTCTCAATCAACTTCTATCATCAAAGCAATTGTTTCATTATAGATAAATAAGGACATTTTTTAATTTAA 3091
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3092 AAATTCATGTCTGAGTTGACTTTCATAAGGGATTTCATTTTTTCCTCAACATTCTTAAAGCCTTTTAGTATTTG 3165
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3166 ACGGTTCTTTTTTCCCAGGACATTTGCTAGGAATAACAACGTTTCAATGTTTTTAATCTACTTGAGCAACACTA 3239
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3240 TCGTGTCTTACAAAAGTTGTTCATATGTAAATGATCATCACATTTCGTGAATTGAGGCCATGTTCAGGTGCTAA 3313
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3314 GGAAGTTCGCCTTTTACACAGAAGATTGAGAAAATTTCCTAGATATAAATACAGATAAATCAGACGTTACAGTG 3387
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3388 GTGACGTAGTAACCATCATGGCAATGGAAAGGAGTCCAATTCATAGCCTAAAACTTCAAATGTATTCTTAGGAG 3461
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3462 TCAGATTTTACTGAATATTTTACCCACAATAGCTGCCTATTTTGTTATAATAAAATATATATAAATATATATAT 3535
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3536 AAAACTTTCTTTAAACTGTAACTATGGGAATTATTTTCTTTACATAGTTGCGCACACACACAAACATATATATA 3609
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3610 TATTTAAAATATATTTTGTTTCTTTTGCCACCTACTCCTAACTTTTTGTTTGGTTTTTAAATTAAATATTAATT 3683
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3684 GAATAGACTTATCTTCCTTAATCATGTGAACTGAAAATGGGGGCATGGTGGTCATGAGGAGGAAACATTTAGGG 3757
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3758 AAATTAGATTATAAGTAAAAGTGTGGGCATATTCTCCTCTTTTCTACAAAGGTTTTCAAATGGTTCCTGAGGTT 3831
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3832 TTTTGTTGTTGTCCGTGTTGTTACTGTTGTTCTTGTCATCAGGTTTGATTTTGGTCCTTGCCCTTTCCTTCTAG 3905
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3906 TTCTCCTTTTATTAATAGGAAGGCAGGCAAAAGCCCCATTTATGTGTGTGTTTTCCCCTCAGACAGCTTTCATC 3979
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 3980 CACTGCTCTGCACTAGAATTGCACAAATCTTCATGGTGAGCAATTTTAAGAAATGTTAGTGAAAGGTAGAAATT 4053
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 4054 ATTTCACAAATCAGTTTCTCTGGTCCTTCATATTAATAATAATATTTGGCTTCCCATTGCTCTTTGGAGTTGTT 4127
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 4128 TATTAAATATGTGTTTTTGACAACCTCCTCATTAGTTTCTTAAATGAGTACTGGTTTGTAAAGAATTATCAACA 4201
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 4202 TTATCCATTCCATTTATGAAGAAGAGGAGAACAGCTAATAAACTGTATTGTAAAATCCATATGTTAAGTGTGTC 4275
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 4276 TTGAATTTTGAAAGAAAAAATATATTTTGCAAGCTAACATTTTCTTGAAACAATTTGAGGCATCATGTAACTTA 4349
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 4350 TAACCGAATCCAAGAGCCGTTAGGCAGCAGAGTGTGTTACCACATTGAAATACACAGTGCTGCTGTTAGACTAA 4423
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 4424 ATGTCGTAGGTTGTTAACCACATAGAAACACACTAGTATGAAGAAAACTGTTGTAAAATCTCAAGAGCTTCAGA 4497
Query 2682 -------------------------------------------------------------------------- 2681
Sbjct 4498 AACTGCCTTACAAGACCGCAGCATAAGCTATTTTGAAGTATTTACCAAATAGTCACATGTTGTAAAATATCAAG 4571
Query 2682 -------------------------------------------------------- 2681
Sbjct 4572 TGGTTATAAAAGGATGCCATTTATATATTAAAATTTACATAACATTGTTTTCTGGA 4627
