Nucleotide Global Alignment
Description
- Query:
- TRCN0000471140
- Subject:
- XM_006518565.3
- Aligned Length:
- 3027
- Identities:
- 1397
- Gaps:
- 1485
Alignment
Query 1 ATGGTAGCGCTGACGCTGTGGCTTCTCCCCTGGATATGCCAGTGCGTGTCGGTGCGGGCCGACTCCATCATCCA 74
||||.||||.||||||||||||||||.||||||||||||||||||||..|||||||||||||||||||||||||
Sbjct 1 ATGGAAGCGTTGACGCTGTGGCTTCTTCCCTGGATATGCCAGTGCGTTACGGTGCGGGCCGACTCCATCATCCA 74
Query 75 CATCGGTGCCATCTTCGAGGAGAACGCGGCCAAGGACGACAGGGTGTTCCAGTTGGCGGTATCCGACCTGAGCC 148
|||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||.||||||||||
Sbjct 75 CATCGGTGCCATCTTCGAGGAGAACGCAGCCAAGGACGACAGGGTGTTCCAGTTGGCTGTATCAGACCTGAGCC 148
Query 149 TCAACGATGACATCCTGCAGAGCGAGAAGATCACCTACTCCATCAAGGTCATCGAGGCCAACAACCCATTCCAG 222
||||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||||.||.||.||||||
Sbjct 149 TCAATGATGACATCCTGCAGAGTGAGAAGATCACCTACTCCATCAAGGTCATCGAGGCCAATAATCCGTTCCAG 222
Query 223 GCTGTGCAGGAAGCCTGTGACCTCATGACCCAGGGGATTTTGGCCTTGGTCACGTCCACTGGCTGTGCATCTGC 296
||.|||||.|||
Sbjct 223 GCGGTGCAAGAA-------------------------------------------------------------- 234
Query 297 CAATGCCCTGCAGTCCCTCACGGATGCCATGCACATCCCACACCTCTTTGTCCAGCGCAACCCGGGAGGGTCGC 370
Sbjct 235 -------------------------------------------------------------------------- 234
Query 371 CACGCACCGCATGCCACCTGAACCCCAGCCCCGATGGTGAGGCCTACACACTGGCTTCGAGACCACCCGTCCGC 444
Sbjct 235 -------------------------------------------------------------------------- 234
Query 445 CTCAATGATGTCATGCTCAGGCTGGTGACGGAGCTGCGCTGGCAGAAGTTCGTCATGTTCTACGACAGCGAGTA 518
Sbjct 235 -------------------------------------------------------------------------- 234
Query 519 TGATATCCGTGGGCTTCAAAGCTTTCTGGACCAGGCCTCGCGGCTGGGCCTTGACGTCTCTTTACAAAAGGTGG 592
||||||||||||||.||||||||.|||||.||||||||..|||||||.||.||.|||||||||||||||||||
Sbjct 235 -GATATCCGTGGGCTCCAAAGCTTCCTGGATCAGGCCTCAAGGCTGGGTCTGGATGTCTCTTTACAAAAGGTGG 307
Query 593 ACAAGAACATTAGCCACGTATTCACCAGCCTCTTCACCACGATGAAGACAGAGGAGCTGAATCGCTACCGGGAC 666
||||||||||.||.|||||.|||||.|||||.||||||||.||||||||.||||||||||||||||||||||||
Sbjct 308 ACAAGAACATCAGTCACGTGTTCACTAGCCTTTTCACCACCATGAAGACCGAGGAGCTGAATCGCTACCGGGAC 381
Query 667 ACGCTTCGCCGCGCCATCCTGCTGCTCAGCCCACAGGGAGCCCACTCCTTCATCAACGAGGCCGTGGAGACCAA 740
||.||.|||||.|||||.||.|||||||||||||||||.||.||||||||||||||.|||||.|||||||||||
Sbjct 382 ACACTGCGCCGTGCCATTCTACTGCTCAGCCCACAGGGGGCGCACTCCTTCATCAATGAGGCTGTGGAGACCAA 455
Query 741 CCTGGCTTCCAAGGACAGCCACTGGGTCTTTGTGAATGAGGAAATCAGTGACCCGGAGATCCTGGATCTGGTCC 814
|.||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct 456 CTTGGCTTCCAAGGACAGCCACTGGGTCTTTGTGAATGAGGAAATCAGTGACCCCGAGATCCTGGATCTGGTCC 529
Query 815 ATAGTGCCCTTGGAAGGATGACCGTGGTCCGGCAAATCTTTCCGTCTGCAAAGGACAATCAGAAATGCACGAGG 888
|.|||||||||||.||||||||||||||||||||||||||.||.||||||||||||||.||||||||.|.||||
Sbjct 530 ACAGTGCCCTTGGCAGGATGACCGTGGTCCGGCAAATCTTCCCATCTGCAAAGGACAACCAGAAATGTATGAGG 603
Query 889 AACAACCACCGCATCTCCTCCCTGCTCTGCGACCCCCAGGAAGGCTACCTCCAGATGCTGCAGATCTCCAACCT 962
||.||||||||||||||||||||||||||.||.||.|||||||||||||||||.|||||||||||||||||.||
Sbjct 604 AATAACCACCGCATCTCCTCCCTGCTCTGTGATCCACAGGAAGGCTACCTCCAAATGCTGCAGATCTCCAATCT 677
Query 963 CTATCTGTATGACAGTGTTCTGATGCTGGCCAACGCCTTTCACAGGAAGCTGGAGGACCGGAAGTGGCATAGCA 1036
|||.|||||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||.|
Sbjct 678 CTACCTGTATGACAGTGTTCTGATGCTGGCCAACGCCTTCCACAGGAAGCTGGAAGACCGGAAGTGGCATAGTA 751
Query 1037 TGGCGAGCCTCAACTGCATACGGAAATCCACTAAGCCATGGAATGGTGGGAGGTCCATGCTGGATACCATCAAA 1110
||||.|||||.||||||||.|||||.||.||.||||||||||||||.|||||.||||||||.||.||.||.|||
Sbjct 752 TGGCAAGCCTTAACTGCATCCGGAAGTCTACCAAGCCATGGAATGGAGGGAGATCCATGCTAGACACGATTAAA 825
Query 1111 AAGGGCCACATCACTGGCCTCACTGGGGTGATGGAGTTTCGGGAGGACAGTTCGAATCCCTATGTCCAGTTTGA 1184
|||||.||.||||||||||||||.|||||.||||||||||||||.||.||.||.|||||.||||||||||||||
Sbjct 826 AAGGGACATATCACTGGCCTCACAGGGGTTATGGAGTTTCGGGAAGATAGCTCAAATCCTTATGTCCAGTTTGA 899
Query 1185 AATCCTTGGCACTACCTATAGTGAGACTTTTGGCAAAGACATGCGCAAGTTGGCGACATGGGACTCAGAGAAGG 1258
||||||||||||.||||||||||||||||||||||||||||||||||||.||||.||.||||||||.|||||||
Sbjct 900 AATCCTTGGCACAACCTATAGTGAGACTTTTGGCAAAGACATGCGCAAGCTGGCCACCTGGGACTCGGAGAAGG 973
Query 1259 GCTTGAATGGCAGCTTGCAAGAGAGGCCCATGGGCAGCCGCCTCCAAGGATTGACTCTTAAAGTGGTGACTGTC 1332
|||||||||||||..|.||.||||||||||||||||||||||||||||||.|||||||.|||||||||||||||
Sbjct 974 GCTTGAATGGCAGTCTACAGGAGAGGCCCATGGGCAGCCGCCTCCAAGGACTGACTCTCAAAGTGGTGACTGTC 1047
Query 1333 TTGGAAGAGCCTTTCGTGATGGTGGCTGAGAACATCCTAGGACAGCCCAAGCGCTACAAAGGGTTCTCCATAGA 1406
||||||||||||||.||||||||.||||||||.|||||.|||||.||||||||.||||||||||||||||||||
Sbjct 1048 TTGGAAGAGCCTTTTGTGATGGTAGCTGAGAATATCCTTGGACAACCCAAGCGTTACAAAGGGTTCTCCATAGA 1121
Query 1407 TGTCCTGGATGCACTGGCCAAGGCTCTGGGCTTTAAATATGAGATTTACCAAGCCCCTGATGGCAGGTACGGTC 1480
|||.||||||||||||||.||||||||.||.||.|||||||||||.|||||.|||||||||||||||||.||||
Sbjct 1122 TGTGCTGGATGCACTGGCTAAGGCTCTAGGATTCAAATATGAGATATACCAGGCCCCTGATGGCAGGTATGGTC 1195
Query 1481 ACCAGCTCCATAACACCTCCTGGAACGGGATGATCGGGGAGCTCATCAGCAAGAGAGCAGACTTGGCCATCTCT 1554
|||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 1196 ACCAGCTCCATAACACCTCCTGGAATGGGATGATCGGGGAGCTCATTAGCAAGAGAGCAGACTTGGCCATCTCT 1269
Query 1555 GCCATCACCATCACCCCAGAGAGGGAGAGCGTTGTGGACTTCAGCAAGCGGTACATGGACTATTCAGTGGGGAT 1628
||.||.|||||||||||||||||.||||||||||||||||||||||||||.|||||||||||.|||||||||||
Sbjct 1270 GCTATTACCATCACCCCAGAGAGAGAGAGCGTTGTGGACTTCAGCAAGCGCTACATGGACTACTCAGTGGGGAT 1343
Query 1629 TCTAATTAAGAAGCCCGAGGAGAAAATCAGCATCTTCTCCCTCTTTGCTCCATTTGATTTCGCTGTGTGGGCCT 1702
.||.||.||||||||.||||||||.|||||||||||.|||||.||.||.||.|||||.||.||.||||||||||
Sbjct 1344 CCTCATCAAGAAGCCTGAGGAGAAGATCAGCATCTTTTCCCTTTTCGCCCCCTTTGACTTTGCGGTGTGGGCCT 1417
Query 1703 GCATTGCAGCAGCCATCCCTGTGGTTGGTGTGCTGATATTTGTGTTGAACAGGATACAGGCTGTGAGGGCTCAG 1776
|||||||.||||||||.||||||||.||.|||||.|||||.||||||||..|||||||||||||.||..|||||
Sbjct 1418 GCATTGCCGCAGCCATTCCTGTGGTGGGCGTGCTCATATTCGTGTTGAATCGGATACAGGCTGTAAGATCTCAG 1491
Query 1777 AGTGCTGCCCAGCCCAGGCCGTCAGCTTCTGCCACTCTGCACAGCGCCATC----------------------- 1827
|||||..|||||||..|.||.||.|||||||||||.||||||||.|||||.
Sbjct 1492 AGTGCCACCCAGCCACGACCCTCGGCTTCTGCCACCCTGCACAGTGCCATTTGGATTGTCTATGGAGCCTTTGT 1565
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 1566 CCAGCAAGGTGGTGAGTCTTCGGTGAACTCTGTGGCCATGCGCATCGTGATGGGCAGCTGGTGGCTCTTCACCC 1639
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 1640 TCATTGTGTGTTCCTCCTACACAGCCAACCTGGCCGCTTTCCTCACAGTGTCTAGGATGGACAACCCCATAAGG 1713
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 1714 ACATTTCAGGACCTGTCCAAGCAACTGGAGATGTCTTATGGCACTGTCCGGGACTCTGCTGTCTATGAGTACTT 1787
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 1788 CAGAGCCAAGGGGACCAATCCCCTGGAGCAGGATAGCACTTTTGCTGAGCTCTGGCGGACCATAAGCAAGAATG 1861
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 1862 GAGGGGCTGACAACTGTGTGTCCAATCCTTCAGAAGGTATCAGGAAGGCAAAGAAGGGGAACTACGCCTTTCTA 1935
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 1936 TGGGATGTGGCCGTGGTGGAGTATGCAGCCCTGACAGATGACGACTGCTCAGTGACTGTCATCGGCAACAGCAT 2009
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 2010 CAGCAGCAAGGGCTACGGGATTGCCCTGCAACATGGCAGCCCCTACAGGGACCTTTTCTCCCAGAGGATCCTGG 2083
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 2084 AGCTGCAAGACACAGGGGACCTGGATGTGCTCAAGCAGAAGTGGTGGCCACACACAGGTCGATGTGACCTCACC 2157
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 2158 AGCCATTCCAGTACCCAGACTGAAGGCAAATCCCTTAAGCTGCACAGCTTCGCTGGGGTCTTCTGCATTTTGGC 2231
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 2232 CATTGGCCTCCTTCTTGCCTGCCTCGTGGCTGCTCTAGAGTTATGGTGGAACAGCAACCGGTGCCACCAGGAGA 2305
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 2306 CCCCCAAAGAGGACAAAGAAGTGAATCTGGAGCAGGTACACCGGCGCATCAACAGCCTCATGGATGAAGACATT 2379
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 2380 GCTCACAAGCAAATTTCCCCAGCGTCCATTGAGCTTTCTGCCCTAGAGATGGGGGGCCTGGCTCCAAGCCAAGC 2453
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 2454 TTTGGAGCCCACGAGGGAGTACCAGAACACCCAGCTCTCAGTCAGCACCTTTCTGCCGGAGCAGAGCAGCCATG 2527
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 2528 GCACCAGCCGGACACTGTCGTCAGGGCCCAGCAGCAACCTGCCACTGCCACTGAGCAGCTCAGCCACTATGCCC 2601
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 2602 TCAATTCAGTGCAAACACAGGTCGCCCAATGGGGGACTGTTTCGACAGAGCCCGGTGAAGACCCCCATCCCTAT 2675
Query 1828 ------------------------------------------------------------------- 1827
Sbjct 2676 GTCCTTCCAGCCCGTGCCTGGAGGCGTCCTTCCAGAGGCTCTGGACACCTCTCATGGCACCTCCATC 2742
