Nucleotide Global Alignment
Description
- Query:
- TRCN0000471140
- Subject:
- XM_006518566.3
- Aligned Length:
- 3027
- Identities:
- 1078
- Gaps:
- 1833
Alignment
Query 1 ATGGTAGCGCTGACGCTGTGGCTTCTCCCCTGGATATGCCAGTGCGTGTCGGTGCGGGCCGACTCCATCATCCA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CATCGGTGCCATCTTCGAGGAGAACGCGGCCAAGGACGACAGGGTGTTCCAGTTGGCGGTATCCGACCTGAGCC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TCAACGATGACATCCTGCAGAGCGAGAAGATCACCTACTCCATCAAGGTCATCGAGGCCAACAACCCATTCCAG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GCTGTGCAGGAAGCCTGTGACCTCATGACCCAGGGGATTTTGGCCTTGGTCACGTCCACTGGCTGTGCATCTGC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CAATGCCCTGCAGTCCCTCACGGATGCCATGCACATCCCACACCTCTTTGTCCAGCGCAACCCGGGAGGGTCGC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CACGCACCGCATGCCACCTGAACCCCAGCCCCGATGGTGAGGCCTACACACTGGCTTCGAGACCACCCGTCCGC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CTCAATGATGTCATGCTCAGGCTGGTGACGGAGCTGCGCTGGCAGAAGTTCGTCATGTTCTACGACAGCGAGTA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 TGATATCCGTGGGCTTCAAAGCTTTCTGGACCAGGCCTCGCGGCTGGGCCTTGACGTCTCTTTACAAAAGGTGG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 ACAAGAACATTAGCCACGTATTCACCAGCCTCTTCACCACGATGAAGACAGAGGAGCTGAATCGCTACCGGGAC 666
||||||||.||||||||||||||||||||||||
Sbjct 1 -----------------------------------------ATGAAGACCGAGGAGCTGAATCGCTACCGGGAC 33
Query 667 ACGCTTCGCCGCGCCATCCTGCTGCTCAGCCCACAGGGAGCCCACTCCTTCATCAACGAGGCCGTGGAGACCAA 740
||.||.|||||.|||||.||.|||||||||||||||||.||.||||||||||||||.|||||.|||||||||||
Sbjct 34 ACACTGCGCCGTGCCATTCTACTGCTCAGCCCACAGGGGGCGCACTCCTTCATCAATGAGGCTGTGGAGACCAA 107
Query 741 CCTGGCTTCCAAGGACAGCCACTGGGTCTTTGTGAATGAGGAAATCAGTGACCCGGAGATCCTGGATCTGGTCC 814
|.||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct 108 CTTGGCTTCCAAGGACAGCCACTGGGTCTTTGTGAATGAGGAAATCAGTGACCCCGAGATCCTGGATCTGGTCC 181
Query 815 ATAGTGCCCTTGGAAGGATGACCGTGGTCCGGCAAATCTTTCCGTCTGCAAAGGACAATCAGAAATGCACGAGG 888
|.|||||||||||.||||||||||||||||||||||||||.||.||||||||||||||.||||||||.|.||||
Sbjct 182 ACAGTGCCCTTGGCAGGATGACCGTGGTCCGGCAAATCTTCCCATCTGCAAAGGACAACCAGAAATGTATGAGG 255
Query 889 AACAACCACCGCATCTCCTCCCTGCTCTGCGACCCCCAGGAAGGCTACCTCCAGATGCTGCAGATCTCCAACCT 962
||.||||||||||||||||||||||||||.||.||.|||||||||||||||||.|||||||||||||||||.||
Sbjct 256 AATAACCACCGCATCTCCTCCCTGCTCTGTGATCCACAGGAAGGCTACCTCCAAATGCTGCAGATCTCCAATCT 329
Query 963 CTATCTGTATGACAGTGTTCTGATGCTGGCCAACGCCTTTCACAGGAAGCTGGAGGACCGGAAGTGGCATAGCA 1036
|||.|||||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||.|
Sbjct 330 CTACCTGTATGACAGTGTTCTGATGCTGGCCAACGCCTTCCACAGGAAGCTGGAAGACCGGAAGTGGCATAGTA 403
Query 1037 TGGCGAGCCTCAACTGCATACGGAAATCCACTAAGCCATGGAATGGTGGGAGGTCCATGCTGGATACCATCAAA 1110
||||.|||||.||||||||.|||||.||.||.||||||||||||||.|||||.||||||||.||.||.||.|||
Sbjct 404 TGGCAAGCCTTAACTGCATCCGGAAGTCTACCAAGCCATGGAATGGAGGGAGATCCATGCTAGACACGATTAAA 477
Query 1111 AAGGGCCACATCACTGGCCTCACTGGGGTGATGGAGTTTCGGGAGGACAGTTCGAATCCCTATGTCCAGTTTGA 1184
|||||.||.||||||||||||||.|||||.||||||||||||||.||.||.||.|||||.||||||||||||||
Sbjct 478 AAGGGACATATCACTGGCCTCACAGGGGTTATGGAGTTTCGGGAAGATAGCTCAAATCCTTATGTCCAGTTTGA 551
Query 1185 AATCCTTGGCACTACCTATAGTGAGACTTTTGGCAAAGACATGCGCAAGTTGGCGACATGGGACTCAGAGAAGG 1258
||||||||||||.||||||||||||||||||||||||||||||||||||.||||.||.||||||||.|||||||
Sbjct 552 AATCCTTGGCACAACCTATAGTGAGACTTTTGGCAAAGACATGCGCAAGCTGGCCACCTGGGACTCGGAGAAGG 625
Query 1259 GCTTGAATGGCAGCTTGCAAGAGAGGCCCATGGGCAGCCGCCTCCAAGGATTGACTCTTAAAGTGGTGACTGTC 1332
|||||||||||||..|.||.||||||||||||||||||||||||||||||.|||||||.|||||||||||||||
Sbjct 626 GCTTGAATGGCAGTCTACAGGAGAGGCCCATGGGCAGCCGCCTCCAAGGACTGACTCTCAAAGTGGTGACTGTC 699
Query 1333 TTGGAAGAGCCTTTCGTGATGGTGGCTGAGAACATCCTAGGACAGCCCAAGCGCTACAAAGGGTTCTCCATAGA 1406
||||||||||||||.||||||||.||||||||.|||||.|||||.||||||||.||||||||||||||||||||
Sbjct 700 TTGGAAGAGCCTTTTGTGATGGTAGCTGAGAATATCCTTGGACAACCCAAGCGTTACAAAGGGTTCTCCATAGA 773
Query 1407 TGTCCTGGATGCACTGGCCAAGGCTCTGGGCTTTAAATATGAGATTTACCAAGCCCCTGATGGCAGGTACGGTC 1480
|||.||||||||||||||.||||||||.||.||.|||||||||||.|||||.|||||||||||||||||.||||
Sbjct 774 TGTGCTGGATGCACTGGCTAAGGCTCTAGGATTCAAATATGAGATATACCAGGCCCCTGATGGCAGGTATGGTC 847
Query 1481 ACCAGCTCCATAACACCTCCTGGAACGGGATGATCGGGGAGCTCATCAGCAAGAGAGCAGACTTGGCCATCTCT 1554
|||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 848 ACCAGCTCCATAACACCTCCTGGAATGGGATGATCGGGGAGCTCATTAGCAAGAGAGCAGACTTGGCCATCTCT 921
Query 1555 GCCATCACCATCACCCCAGAGAGGGAGAGCGTTGTGGACTTCAGCAAGCGGTACATGGACTATTCAGTGGGGAT 1628
||.||.|||||||||||||||||.||||||||||||||||||||||||||.|||||||||||.|||||||||||
Sbjct 922 GCTATTACCATCACCCCAGAGAGAGAGAGCGTTGTGGACTTCAGCAAGCGCTACATGGACTACTCAGTGGGGAT 995
Query 1629 TCTAATTAAGAAGCCCGAGGAGAAAATCAGCATCTTCTCCCTCTTTGCTCCATTTGATTTCGCTGTGTGGGCCT 1702
.||.||.||||||||.||||||||.|||||||||||.|||||.||.||.||.|||||.||.||.||||||||||
Sbjct 996 CCTCATCAAGAAGCCTGAGGAGAAGATCAGCATCTTTTCCCTTTTCGCCCCCTTTGACTTTGCGGTGTGGGCCT 1069
Query 1703 GCATTGCAGCAGCCATCCCTGTGGTTGGTGTGCTGATATTTGTGTTGAACAGGATACAGGCTGTGAGGGCTCAG 1776
|||||||.||||||||.||||||||.||.|||||.|||||.||||||||..|||||||||||||.||..|||||
Sbjct 1070 GCATTGCCGCAGCCATTCCTGTGGTGGGCGTGCTCATATTCGTGTTGAATCGGATACAGGCTGTAAGATCTCAG 1143
Query 1777 AGTGCTGCCCAGCCCAGGCCGTCAGCTTCTGCCACTCTGCACAGCGCCATC----------------------- 1827
|||||..|||||||..|.||.||.|||||||||||.||||||||.|||||.
Sbjct 1144 AGTGCCACCCAGCCACGACCCTCGGCTTCTGCCACCCTGCACAGTGCCATTTGGATTGTCTATGGAGCCTTTGT 1217
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 1218 CCAGCAAGGTGGTGAGTCTTCGGTGAACTCTGTGGCCATGCGCATCGTGATGGGCAGCTGGTGGCTCTTCACCC 1291
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 1292 TCATTGTGTGTTCCTCCTACACAGCCAACCTGGCCGCTTTCCTCACAGTGTCTAGGATGGACAACCCCATAAGG 1365
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 1366 ACATTTCAGGACCTGTCCAAGCAACTGGAGATGTCTTATGGCACTGTCCGGGACTCTGCTGTCTATGAGTACTT 1439
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 1440 CAGAGCCAAGGGGACCAATCCCCTGGAGCAGGATAGCACTTTTGCTGAGCTCTGGCGGACCATAAGCAAGAATG 1513
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 1514 GAGGGGCTGACAACTGTGTGTCCAATCCTTCAGAAGGTATCAGGAAGGCAAAGAAGGGGAACTACGCCTTTCTA 1587
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 1588 TGGGATGTGGCCGTGGTGGAGTATGCAGCCCTGACAGATGACGACTGCTCAGTGACTGTCATCGGCAACAGCAT 1661
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 1662 CAGCAGCAAGGGCTACGGGATTGCCCTGCAACATGGCAGCCCCTACAGGGACCTTTTCTCCCAGAGGATCCTGG 1735
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 1736 AGCTGCAAGACACAGGGGACCTGGATGTGCTCAAGCAGAAGTGGTGGCCACACACAGGTCGATGTGACCTCACC 1809
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 1810 AGCCATTCCAGTACCCAGACTGAAGGCAAATCCCTTAAGCTGCACAGCTTCGCTGGGGTCTTCTGCATTTTGGC 1883
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 1884 CATTGGCCTCCTTCTTGCCTGCCTCGTGGCTGCTCTAGAGTTATGGTGGAACAGCAACCGGTGCCACCAGGAGA 1957
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 1958 CCCCCAAAGAGGACAAAGAAGTGAATCTGGAGCAGGTACACCGGCGCATCAACAGCCTCATGGATGAAGACATT 2031
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 2032 GCTCACAAGCAAATTTCCCCAGCGTCCATTGAGCTTTCTGCCCTAGAGATGGGGGGCCTGGCTCCAAGCCAAGC 2105
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 2106 TTTGGAGCCCACGAGGGAGTACCAGAACACCCAGCTCTCAGTCAGCACCTTTCTGCCGGAGCAGAGCAGCCATG 2179
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 2180 GCACCAGCCGGACACTGTCGTCAGGGCCCAGCAGCAACCTGCCACTGCCACTGAGCAGCTCAGCCACTATGCCC 2253
Query 1828 -------------------------------------------------------------------------- 1827
Sbjct 2254 TCAATTCAGTGCAAACACAGGTCGCCCAATGGGGGACTGTTTCGACAGAGCCCGGTGAAGACCCCCATCCCTAT 2327
Query 1828 ------------------------------------------------------------------- 1827
Sbjct 2328 GTCCTTCCAGCCCGTGCCTGGAGGCGTCCTTCCAGAGGCTCTGGACACCTCTCATGGCACCTCCATC 2394
