Nucleotide Global Alignment
Description
- Query:
- TRCN0000471221
- Subject:
- XR_001739020.1
- Aligned Length:
- 3010
- Identities:
- 1169
- Gaps:
- 1840
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGCTGAATGGGCGCGAGAGCGGCGCTGGGGGCGGGTGGGGGCGCGGGGTACCGGGCTGGCGGCCGGCCGGCGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCTCATTAGTATGCGGACGAAGGCGGCGGGCTGCGCGGAGCGGCGTCCCCTGCAGCCGCGGACCGAGGCAGCG 148
Query 1 ---------------------ATGCCAAGTGAGTACACCTATGTGAAACTGAGAAGTGATTGCTCGAGGCCTTC 53
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCGGCACCTGCCGGCCGAGCAATGCCAAGTGAGTACACCTATGTGAAACTGAGAAGTGATTGCTCGAGGCCTTC 222
Query 54 CCTGCAATGGTACACCCGAGCTCAAAGCAAGATGAGAAGGCCCAGCTTGTTATTAAAAGACATCCTCAAATGTA 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCTGCAATGGTACACCCGAGCTCAAAGCAAGATGAGAAGGCCCAGCTTGTTATTAAAAGACATCCTCAAATGTA 296
Query 128 CATTGCTTGTGTTTGGAGTGTGGATCCTTTATATCCTCAAGTTAAATTATACTACTGAAGAATGTGACATGAAA 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CATTGCTTGTGTTTGGAGTGTGGATCCTTTATATCCTCAAGTTAAATTATACTACTGAAGAATGTGACATGAAA 370
Query 202 AAAATGCATTATGTGGACCCTGACCGTGTA-------------------------------------------- 231
|||||||||||||||||||||||||.||||
Sbjct 371 AAAATGCATTATGTGGACCCTGACCATGTAAAGACCTTATCTCCCTGCGGATGGCATTGCGTGCAGTTAATTAT 444
Query 232 -------------------------------------------------------------------------- 231
Sbjct 445 GGCCAGATGGACTCAGCCGCTTCTTCATCGTCTTCTCTCGGACTCTGCAGACCTACACCGTGCCTTTAAAGGAA 518
Query 232 -------------------------------------------------------------------------- 231
Sbjct 519 GCAGGGCCCTCCCTGCTGAAGCATTCAGTGAGCCCAGGCACCAGCATCTTCAAACCGAGTCTTTTCTCTCCTTA 592
Query 232 -------------------------------------------------------------------------- 231
Sbjct 593 GTGCTGCTCCCCGCTTTCCAGGCCTTCCTGGGATATCTTAGAGCTCCTGAAGGTGCGGCACTCGCCTTGAGGCA 666
Query 232 -------------------------------------------------------------------------- 231
Sbjct 667 CTTTCTTCTGAGCTGTGAGCTATGGGCAAGCAGTGGAGGGGGAAGAGAGCAGCTGAAGCAGATGCCGGTTCAAC 740
Query 232 -------------------------------------------------------------------------- 231
Sbjct 741 TTACTTAAAGATGTGGGACAAGCTCTGAGGAAGCCCCCAAGACAATGATGTCTGGTTGTGCACCATTGAAGCAA 814
Query 232 -------------------------------------------------------------------------- 231
Sbjct 815 GAACAGAAACCATCCCAGAGTGGAGGACATGGCCCATGTGGTCCTCCTGTTCTGAGTGGCTATGAGATGGAGTT 888
Query 232 -------------------------------------------------------------------------- 231
Sbjct 889 CTGTGTGAGCTCTCTACAGAAAAAGCCCTGTCTCCAGGCAATCAGTGGAGATCTGTTAAACGAGTTGAAACAAA 962
Query 232 -------------------------------------------------------------------------- 231
Sbjct 963 AGAGGACAAGGAATTGCTGTGGCTTTAGACGTTGCCAGGACATGTAGAAACTCACTCAGGATTTACTACTGCAT 1036
Query 232 ------------------------------------AAGAGAGCTCAGAAATATGCTCAGCAAGTCTTGCAGAA 269
||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CCACTGTCACTTAGGCGCAGGAGGGGTCACAGTCAGAAGAGAGCTCAGAAATATGCTCAGCAAGTCTTGCAGAA 1110
Query 270 GGAATGTCGTCCCAAGTTTGCCAAGACATCAATGGCGCTGTTATTTGAGCACAGGTATAGCGTGGACTTACTCC 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GGAATGTCGTCCCAAGTTTGCCAAGACATCAATGGCGCTGTTATTTGAGCACAGGTATAGCGTGGACTTACTCC 1184
Query 344 CTTTTGTGCAGAAGGCCCCCAAAGACAGTGAAGCTGAGTCCAAGTACGATCCTCCTTTTGGGTTCCGGAAGTTC 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CTTTTGTGCAGAAGGCCCCCAAAGACAGTGAAGCTGAGTCCAAGTACGATCCTCCTTTTGGGTTCCGGAAGTTC 1258
Query 418 TCCAGTAAAGTCCAGACCCTCTTGGAACTCTTGCCAGAGCACGACCTCCCTGAACACTTGAAAGCCAAGACCTG 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TCCAGTAAAGTCCAGACCCTCTTGGAACTCTTGCCAGAGCACGACCTCCCTGAACACTTGAAAGCCAAGACCTG 1332
Query 492 TCGGCGCTGTGTGGTTATTGGAAGCGGAGGAATACTGCACGGATTAGAACTGGGCCACACCCTGAACCAGTTCG 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TCGGCGCTGTGTGGTTATTGGAAGCGGAGGAATACTGCACGGATTAGAACTGGGCCACACCCTGAACCAGTTCG 1406
Query 566 ATGTTGTGATAAGGTTAAACAGTGCACCAGTTGAGGGATATTCAGAACATGTTGGAAATAAAACTACTATAAGG 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 ATGTTGTGATAAGGTTAAACAGTGCACCAGTTGAGGGATATTCAGAACATGTTGGAAATAAAACTACTATAAGG 1480
Query 640 ATGACTTATCCAGAGGGCGCACCACTGTCTGACCTTGAATATTATTCCAATGACTTATTTGTTGCTGTTTTATT 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ATGACTTATCCAGAGGGCGCACCACTGTCTGACCTTGAATATTATTCCAATGACTTATTTGTTGCTGTTTTATT 1554
Query 714 TAAGAGTGTTGATTTCAACTGGCTTCAAGCAATGGTAAAAAAGGAAACCCTGCCATTCTGGGTACGACTCTTCT 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TAAGAGTGTTGATTTCAACTGGCTTCAAGCAATGGTAAAAAAGGAAACCCTGCCATTCTGGGTACGACTCTTCT 1628
Query 788 TTTGGAAGCAGGTGGCAGAAAAAATCCCACTGCAGCCAAAACATTTCAGGATTTTGAATCCAGTTATCATCAAA 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TTTGGAAGCAGGTGGCAGAAAAAATCCCACTGCAGCCAAAACATTTCAGGATTTTGAATCCAGTTATCATCAAA 1702
Query 862 GAGACTGCCTTTGACATCCTTCAGTACTCAGAGCCTCAGTCAAGGTTCTGGGGCCGAGATAAGAACGTCCCCAC 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GAGACTGCCTTTGACATCCTTCAGTACTCAGAGCCTCAGTCAAGGTTCTGGGGCCGAGATAAGAACGTCCCCAC 1776
Query 936 AATCGGTGTCATTGCCGTTGTCTTAGCCACACATCTGTGCGATGAAGTCAGTTTGGCGGGTTTTGGATATGACC 1009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 AATCGGTGTCATTGCCGTTGTCTTAGCCACACATCTGTGCGATGAAGTCAGTTTGGCGGGTTTTGGATATGACC 1850
Query 1010 TCAATCAACCCAGAACACCTTTGCACTACTTCGACAGTCAATGCATGGCTGCTATGAACTTTCAGACCATGCAT 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TCAATCAACCCAGAACACCTTTGCACTACTTCGACAGTCAATGCATGGCTGCTATGAACTTTCAGACCATGCAT 1924
Query 1084 AATGTGACAACGGAAACCAAGTTCCTCTTAAAGCTGGTCAAAGAGGGAGTGGTGAAAGATCTCAGTGGAGGCAT 1157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 AATGTGACAACGGAAACCAAGTTCCTCTTAAAGCTGGTCAAAGAGGGAGTGGTGAAAGATCTCAGTGGAGGCAT 1998
Query 1158 TGATCGTGAATTT------------------------------------------------------------- 1170
|||||||||||||
Sbjct 1999 TGATCGTGAATTTTGAACACAGAAAACCTCAGTTGAAAATGCAACTCTAACTCTGAGAGCTGTTTTTGACAGCC 2072
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 2073 TTCTTGATGTATTTCTCCATCCTGCAGATACTTTGAAGTGCAGCTCATGTTTTTAACTTTTAATTTAAAAACAC 2146
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 2147 AAAAAAAATTTTAGCTCTTCCCACTTTTTTTTTCCTATTTATTTGAGGTCAGTGTTTGTTTTTGCACACCATTT 2220
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 2221 TGTAAATGAAACTTAAGAATTGAATTGGAAAGACTTCTCAAAGAGAATTGTATGTAACGATGTTGTATTGATTT 2294
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 2295 TTAAGAAAGTAATTTAATTTGTAAAACTTCTGCTCGTTTACACTGCACATTGAATACAGGTAACTAATTGGAAG 2368
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 2369 GAGAGGGGAGGTCACTCTTTTGATGGTGGCCCTGAACCTCATTCTGGTTCCCTGCTGCGCTGCTTGGTGTGACC 2442
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 2443 CACGGAGGATCCACTCCCAGGATGACGTGCTCCGTAGCTCTGCTGCTGATACTGGGTCTGCGATGCAGCGGCGT 2516
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 2517 GAGGCCTGGGCTGGTTGGAGAAGGTCACAACCCTTCTCTGTTGGTCTGCCTTCTGCTGAAAGACTCGAGAACCA 2590
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 2591 ACCAGGGAAGCTGTCCTGGAGGTCCCTGGTCGGAGAGGGACATAGAATCTGTGACCTCTGACAACTGTGAAGCC 2664
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 2665 ACCCTGGGCTACAGAAACCACAGTCTTCCCAGCAATTATTACAATTCTTGAATTCCTTGGGGATTTTTTACTGC 2738
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 2739 CCTTTCAAAGCACTTAAGTGTTAGATCTAACGTGTTCCAGTGTCTGTCTGAGGTGACTTAAAAAATCAGAACAA 2812
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 2813 AACTTCTATTATCCAGAGTCATGGGAGAGTACACCCTTTCCAGGAATAATGTTTTGGGAAACACTGAAATGAAA 2886
Query 1171 -------------------------------------------------------------------------- 1170
Sbjct 2887 TCTTCCCAGTATTATAAATTGTGTATTTAAAAAAAAGAAACTTTTCTGAATGCCTACCTGGCGGTGTATACCAG 2960
Query 1171 -------------------------------------------------- 1170
Sbjct 2961 GCAGTGTGCCAGTTTAAAAAGATGAAAAAGAATAAAAACTTTTGAGGAAC 3010
