Nucleotide Global Alignment
Description
- Query:
- TRCN0000471271
- Subject:
- XR_001753203.2
- Aligned Length:
- 3519
- Identities:
- 453
- Gaps:
- 3066
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACAACCCGCGGAAGGCGCCGTGCGCCGGTTGCTATACAGGCCGCACTTCACACCCCGTGCCTCCCCGCCTCTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGCTCCTCCGCCCAGATCCCCGGCGCTCCCGCGTTCGGTGACGGCCGGGTAGGCTGTAGGCAGCGCAATGCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGACAGAGCTGCTGGCGGCGGCGGGCGAATCTCCCTGCACCATGAGCCTCGGCTCCGGCCCCGTTAGGGGCCGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TAAGCACAGCGCACGCCGCCCTCCATTTGCCCCGGGGCCTCGGCTGCGAAGATAGCGGCGGCCGGACAGGAAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCGAGGAAAGCGCTGGGCCGGGTCTCTACGAACACGTGAAGGAAAAGCAGCTCCGTCCACAACGCCGCTTCGGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCTCCTAGGGAGTCGGGCCCCGGGCCGCCACCGTCACCTCGGCCGCTGCCGCTGTCGCCATCGCCTTGTTTCCC 444
Query 1 -----------ATGGCCGAGGACCTCTCTGCGGCCACGTCCTACACCGAAGATGATTTCTACTGCCCCGTCTGT 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CATCCCCCGCCATGGCCGAGGACCTCTCTGCGGCCACGTCCTACACCGAAGATGATTTCTACTGCCCCGTCTGT 518
Query 64 CAGGAGGTGCTCAAAACGCCCGTGCGGACCACGGCCTGTCAGCACGTTTTCTGTAGAAAATGTTTCCTGACTGC 137
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CAGGAGGTGCTCAAAACGCCCGTGCGGACCACGGCCTGTCAGCACGT--------------------------- 565
Query 138 AATGAGGGAAAGCGGAGCACATTGTCCCCTATGTCGTGGAAATGTGACTAGAAGAGAGAGAGCATGTCCTGAAC 211
Sbjct 566 -------------------------------------------------------------------------- 565
Query 212 GGGCCTTAGACCTTGAAAATATAATGAGGAAGTTTTCTGGTAGCTGCAGATGCTGTGCAAAACAGATTAAATTC 285
Sbjct 566 -------------------------------------------------------------------------- 565
Query 286 TATCGCATGAGACATCATTACAAATCTTGTAAGAAGTATCAGGATGAATATGGTGTTTCTTCTATCATTCCAAA 359
Sbjct 566 -------------------------------------------------------------------------- 565
Query 360 CTTTCAGATCTCTCAAGATTCAGTAGGGAACAGCAATAGGAGTGAAACATCCACATCTGATAACACAGAAACTT 433
|||||||||||||||||||||||||||||||||||||||||
Sbjct 566 ---------------------------------CAATAGGAGTGAAACATCCACATCTGATAACACAGAAACTT 606
Query 434 ACCAAGAGAATACAAGTTCTTCTGGTCATCCTACTTTTAAGTGTCCCCTGTGTCAAGAATCAAATTTTACCAGA 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 607 ACCAAGAGAATACAAGTTCTTCTGGTCATCCTACTTTTAAGTGTCCCCTGTGTCAAGAATCAAATTTTACCAGA 680
Query 508 CAGCGTTTACTGGATCACTGTAACAGTAATCACCTATTTCAGATAGTTCCTGTGACATGTCCTATTTGTGTGTC 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 681 CAGCGTTTACTGGATCACTGTAACAGTAATCACCTATTTCAGATAGTTCCTGTGACATGTCCTATTTGTGTGTC 754
Query 582 TCTTCCTTGGGGAGATCCTAGCCAGATTACCAGAAATTTCGTTAGTCATCTAAATCAGAGACATCAATTTGATT 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 755 TCTTCCTTGGGGAGATCCTAGCCAGATTACCAGAAATTTCGTTAGTCATCTAAATCAGAGACATCAATTTGATT 828
Query 656 ATGGAGAATTTGTGAATCTTCAGCTAGATGAAGAAACCCAATACCAAACTGCTGTTGAAGAATCTTTTCAAGTA 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 829 ATGGAGAATTTGTGAATCTTCAGCTAGATGAAGAAACCCAATACCAAACTGCTGTTGAAGAATCTTTTCAAGTA 902
Query 730 AACATC-------------------------------------------------------------------- 735
||||||
Sbjct 903 AACATCTGAAGGCTGTAGACATCTCTGCATCTTTGTACCTGCAAGTGCCATCTTTAAGGGGGAAACTACATGAA 976
Query 736 -------------------------------------------------------------------------- 735
Sbjct 977 GTCACCGTTACAGTAACTTGATGTGTATATTAATAAAAGTAATTCAGTCATTTTAGTTTTTGATTGAAAATAAA 1050
Query 736 -------------------------------------------------------------------------- 735
Sbjct 1051 GGTAGGGCTTCTAAAAACTTCATCATCTTGATAAGTTAAAAAATGAAAGTTATGACATTAGCTTTAAAGGTGTA 1124
Query 736 -------------------------------------------------------------------------- 735
Sbjct 1125 AAAAAGATGTTTCACTAATGTAACGGTGAAAGAGAATCCCTGTTGTACTTTATCTTTTTGTAATATTATTTTTG 1198
Query 736 -------------------------------------------------------------------------- 735
Sbjct 1199 AATTTTTCATTATTATGTTGCTTTTGAAATTTGATGCATTCCTCCCATTTACTTTATTATTGTACACATTTAAC 1272
Query 736 -------------------------------------------------------------------------- 735
Sbjct 1273 ACACAGTAGCAAATTTTGAACGATGTGATTGATATAACCTAACAAATCTGAGCCAGTTATTATTAGAGTTGCAG 1346
Query 736 -------------------------------------------------------------------------- 735
Sbjct 1347 AATAGAAACTTGAAGTGCTAAATGGAATAATCCAAAGGAAATTTTTTAAATGCAGGTTCTAGCTGAAAAATTCA 1420
Query 736 -------------------------------------------------------------------------- 735
Sbjct 1421 ACTATAAGAAAATTGTATTTATATAACATTTACTATTTTTGAAGACTAGTGAGATTTCTGTAATAATTTTAATT 1494
Query 736 -------------------------------------------------------------------------- 735
Sbjct 1495 CTTTAAAAAGTGAAAGCTTGTTGTAAAGATATTTTCTTTTTGTTATTAGAAGGAAATACAAAGAGAAAAATTTC 1568
Query 736 -------------------------------------------------------------------------- 735
Sbjct 1569 TTTCTTTCATGGGCATTTGATAATTTCAGTCTTTGACTGATTTGTAAGCCTAGAATATACTAAGCTGAATAACA 1642
Query 736 -------------------------------------------------------------------------- 735
Sbjct 1643 GCTCTTTGGCCTCAGAATTTTCAGTAGCCAGTATTTCTGATTAACTAAGTTGAAACTCTTATTAGAAACTTTCA 1716
Query 736 -------------------------------------------------------------------------- 735
Sbjct 1717 GTTGGTGATATTGTATTCTAGAAGATATAAATGAGAGGTTTGGCTTCATCTCAGTTTAGAAATTTATTCAAAGC 1790
Query 736 -------------------------------------------------------------------------- 735
Sbjct 1791 TAAAGATGTATATATACATATACTTTTGTGTGTATATATACACATATGTGTGTATGCAGTTTGTCAGGTTATAT 1864
Query 736 -------------------------------------------------------------------------- 735
Sbjct 1865 ATAGAATTTCTATTAAGGATTTTTTAAATGGACAAGCAATAGGGGGTTGAAGTGTTTATCTGATTTGTTTAAAA 1938
Query 736 -------------------------------------------------------------------------- 735
Sbjct 1939 TTTTGTATATCACCAAATTTTTAAAAAGTGATAGTCACAGTGCTAAGTTATCTAGTTGGCTACTATTACACCTT 2012
Query 736 -------------------------------------------------------------------------- 735
Sbjct 2013 AAAAATTGAGTTTACACACACACAATTACCTGTTTATATGGTGCTCATTTGTTATTCTCAAATATAATGTGTGA 2086
Query 736 -------------------------------------------------------------------------- 735
Sbjct 2087 CCGTGATATAGTGAGAAAGATTCTACCAACCACTGTTTCACTACTTTTTAGTTAAAATTGGGTATGTTCTTAAT 2160
Query 736 -------------------------------------------------------------------------- 735
Sbjct 2161 ATTCATTAGTGAGAATCACAAAGTATTTTGTAGAAGGCCCAAATCACAGAATAAAGGACTAAGAGTGGATTTGC 2234
Query 736 -------------------------------------------------------------------------- 735
Sbjct 2235 TGACATTCCATACTAATATACATTGTTTATGCTTTCTTTAAAATAACTAGAAGAACATAAAAGAAAGAGAATCT 2308
Query 736 -------------------------------------------------------------------------- 735
Sbjct 2309 CAGAAGTAGTTTGCTGCTAATATATACATATATTGTATAAAAAGGTATATTTTGGTTTTGTTAAAACCCTTGTT 2382
Query 736 -------------------------------------------------------------------------- 735
Sbjct 2383 GACTTTTCTACACTGAACATTTTTTTTAACTTGATTTAATAAAAATGTTAATTTTGGAAGTGCAGTTTTGTAAA 2456
Query 736 -------------------------------------------------------------------------- 735
Sbjct 2457 AACCTTTTTCAGTCAAACAGTAAAGACTTTATTTATGGATTGTAATAACAACCACAAGAAAAGCCATACATCTT 2530
Query 736 -------------------------------------------------------------------------- 735
Sbjct 2531 AATGAACATACGCCTTTGTTCTGTCATTTTAAAGAGTGGTGTTTACTATGTGTGTGCTTGAGCATTTTCTTTCA 2604
Query 736 -------------------------------------------------------------------------- 735
Sbjct 2605 GTTACATGGGTGTAATTTAAAAAACAGCTCCTTTTTAAGACTTTTGACCATAGTGTTTTCCAGTTTAAAGCAAT 2678
Query 736 -------------------------------------------------------------------------- 735
Sbjct 2679 AACTTTCATAGTTTCTTTCAAAGTTTAATACATCCAATATGTCAAGTTAAACCATTCTGGGATTTGCAAAGTTT 2752
Query 736 -------------------------------------------------------------------------- 735
Sbjct 2753 AATACATCCAATATGTCAAGTTAAACCATTCTGGGATTTGGGAACTTCTTTAAAGGAAAATTGTAGTAGAGGTC 2826
Query 736 -------------------------------------------------------------------------- 735
Sbjct 2827 ATCTTGATGGAATTGTGTTTTAAAGTTTTGTGAATGAGTTAAATATCATTGATAGTCTTGTGTGTCTCACATAT 2900
Query 736 -------------------------------------------------------------------------- 735
Sbjct 2901 CAGCTTTTTCATAAGGAAAATACTTTATTTGCTTTTATCTGAGAATTTCTCAGTATGAAAATGATTGTTTAAAA 2974
Query 736 -------------------------------------------------------------------------- 735
Sbjct 2975 TTTCCCCTCTTTTTGTCAGTGCATTGGGAATAGGGATAGACTTTACAGATTTATGGAAATTAAATTTATGGGGA 3048
Query 736 -------------------------------------------------------------------------- 735
Sbjct 3049 AAAGTTTATTTTTAATATTACTTATAGCTGAGTCAGAATTAAAGGAGGGAATTGTATTGATACTCCAATACCTA 3122
Query 736 -------------------------------------------------------------------------- 735
Sbjct 3123 AATTTCACAATACCACTTAGGAAAGCTATTTCAACAAATTACAGTTTTATTGTTAAAACAGAGTCTTATTTGAG 3196
Query 736 ----------------------------------------- 735
Sbjct 3197 ATGTATTGCTTTATTTTTCAATTAAAAGTGGTTTTCTCCTA 3237
