Nucleotide Global Alignment

Description

Query:
TRCN0000471315
Subject:
XR_001740062.1
Aligned Length:
1247
Identities:
675
Gaps:
571

Alignment

Query    1  --------------------------------------------ATGGCGTCCGTGACGCTGAGCGAGGCGGAG  30
                                                        ||||||||||||||||||||||||||||||
Sbjct    1  GGACGCGCGCAGATGACGTGCGGCTCGTGGGGCAGCTCGGCAGCATGGCGTCCGTGACGCTGAGCGAGGCGGAG  74

Query   31  AAGGTGTACATCGTGCATGGCGTCCAGGAAGACCTCCGTGTGGATGGCCGTGGCTGTGAGGACTACCGATGTGT  104
            ||||||||||||||||||||||||||                                                
Sbjct   75  AAGGTGTACATCGTGCATGGCGTCCA------------------------------------------------  100

Query  105  CGAAGTGGAAACTGATGTGGTGTCCAACACTAGTGGGTCCGCCAGGGTCAAGCTGGGTCACACAGACATCTTGG  178
                                                                                      
Sbjct  101  --------------------------------------------------------------------------  100

Query  179  TGGGAGTGAAAGCAGAAATGGGGACGCCGAAGCTGGAGAAACCAAATGAAGGCTACTTGGAGTTCTTTGTTGAC  252
                                                                                      
Sbjct  101  --------------------------------------------------------------------------  100

Query  253  TGTTCAGCCAGTGCTACCCCTGAATTTGAAGGTAGAGGAGGTGATGACCTTGGCACCGAGATCGCTAACACCCT  326
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  101  -GTTCAGCCAGTGCTACCCCTGAATTTGAAGGTAGAGGAGGTGATGACCTTGGCACCGAGATCGCTAACACCCT  173

Query  327  CTATCGGATATTTAACAATAAAAGCAGTGTCGACTTAAAGACCCTCTGCATTAGTCCTCGGGAGCACTGCTGGG  400
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  174  CTATCGGATATTTAACAATAAAAGCAGTGTCGACTTAAAGACCCTCTGCATTAGTCCTCGGGAGCACTGCTGGG  247

Query  401  TTCTCTATGTGGATGTGCTGCTTCTGGAATGTGGTGGAAATTTGTTTGATGCCATTTCCATTGCTGTAAAGGCT  474
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  248  TTCTCTATGTGGATGTGCTGCTTCTGGAATGTGGTGGAAATTTGTTTGATGCCATTTCCATTGCTGTAAAGGCT  321

Query  475  GCTCTCTTCAATACAAGGATACCAAGGGTTCGAGTTTTGGAGGATGAAGAGGGGTCGAAGGACATTGAATTGTC  548
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  322  GCTCTCTTCAATACAAGGATACCAAGGGTTCGAGTTTTGGAGGATGAAGAGGGGTCGAAGGACATTGAATTGTC  395

Query  549  AGATGACCCTTATGACTGCATACGACTAAGTGTGGAGAATGTCCCCTGCATTGTCACTCTGTGCAAGATTGGCT  622
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  396  AGATGACCCTTATGACTGCATACGACTAAGTGTGGAGAATGTCCCCTGCATTGTCACTCTGTGCAAGATTGGCT  469

Query  623  ATCGGCATGTGGTGGATGCTACTCTTCAGGAGGAGGCCTGCTCGCTGGCCAGCTTGCTGGTGTCGGTGACCAGC  696
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  470  ATCGGCATGTGGTGGATGCTACTCTTCAGGAGGAGGCCTGCTCGCTGGCCAGCTTGCTGGTGTCGGTGACCAGC  543

Query  697  AAGGGAGTTGTGACGTGCATGAGGAAAGTGGGGAAGGGCAGCCTGGACCCAGAGAGCATCTTCGAGATGATGGA  770
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  544  AAGGGAGTTGTGACGTGCATGAGGAAAGTGGGGAAGGGCAGCCTGGACCCAGAGAGCATCTTCGAGATGATGGA  617

Query  771  GACTGGCAAGCGTGTGGGCAAGGTACTGCATGCCTCCTTGCAGAGTGTTCTGCACAAGGAAGAAAGCCTGGGGC  844
            |||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct  618  GACTGGCAAGCGTGTGGGCAAGGTACTGCATGCCTCCTTGCAGAGTGTTGTGCACAAGGAAGAAAGCCTGGGGC  691

Query  845  CCAAGAGACAGAAAGTTGGATTCCTGGGA---------------------------------------------  873
            |||||||||||||||||||||||||||||                                             
Sbjct  692  CCAAGAGACAGAAAGTTGGATTCCTGGGATGATTTGCACATCAACTGCTCAACTGTGGATTGTTTTTTACTTTT  765

Query  874  --------------------------------------------------------------------------  873
                                                                                      
Sbjct  766  CCTTTTAAACCGGGGAACTGAAACTCCTAAATCTTAAAACACCCTGGGGAAGGAGCTGATTCACGAAGGAGAGC  839

Query  874  --------------------------------------------------------------------------  873
                                                                                      
Sbjct  840  GTTTCAACCGTGGCATTTGCTCTCTGCATTCCAGTTAGCAAATGGGTGACTATCTACAGGCACCATGACAGTGT  913

Query  874  --------------------------------------------------------------------------  873
                                                                                      
Sbjct  914  TCCCAACAAGGCAGAAATCAGCCTGGTCTCTCCTTCCCTGCTCCTGGTTGACTGCCCGTGACATGACAAAACAT  987

Query  874  ---------------------------------------------------------------  873
                                                                           
Sbjct  988  TGGCAGTGGTGGCGCAGAGATGCAACTCGAGTGTGAATAAAGTTTAGAAGCATTTGCTTTTGA  1050