Nucleotide Global Alignment
Description
- Query:
- TRCN0000471341
- Subject:
- XR_922884.1
- Aligned Length:
- 4288
- Identities:
- 1229
- Gaps:
- 3050
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGAGGCGCGGGTCACAGAGACCTAGAACAGCTGGAATCCTTCGCCCCCGGCGCGCAGCCTTCGCCCGCCGGAAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCTGCCTTATCCACCAGCGGGATGCTTACCTCGCCCGCCCTCTCGGGTCAGGCGGGCCCGGGAGGATGGGAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTGGCTGCTGAGCGGGAGCCGCCACGTCTTCCACCCGACATATTGCCTAGAGTTTGCTGTGACTTAGATCTTGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTCAGAGATGGAGAAATCAGGCCCATCTTCTACCATCTCTGAGCAGCAGCTGCAGAGGCAAGAGGGATGGATTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACACCAAAACAGACTTGGCTGAGCAGAGTCTCATTTCATCTGAGAAATGGCTTCAACTGCATGGGCTTAAGAGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AACAAATTGACCTTGAAACAGATTTTGTCACAGATCGGATTCCCACATTGTGAAGATTATGTGGCGTCTCTGGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAGACCTGTGGCTTCTCGGTATGCTGATGGTCTGTTTCCACAGCTCTACAGAGCAGAAGATGGCAGAGTATACA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATCTGACAGCTAAATCAGAACTGATTTATCAGTTTGTGGAACATTTAACACAAGCTGTGGAGAGCTACAAGCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CGAATGGACTGGCTCACCAGCAAGAGCCGGCAGATTTTTGGTGTCATCTTGGAACAGTGCGTCACCATAGTGCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGATTTTGGCGGCATTCTGGAGGGGGAGCTTGATCTGTGCCGAGAGGCTCTAACAATGGTTCTCCAGGAGCAGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGGCTCACATAACCGAGTTCAATATCATACGGGTTTCTCAAGAGCCTGTGAAGTGGCAGGAAAATGCTACTCCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTGACCGAACAGTCCATAGCTACTGCCATCAGTTGGGTTGAGAAACTGACGGTTGAGCTGACTGTGAGCGAGGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGGCCGCCTGGATGCTCTGCTGGAAGCCGGGAGAGACAAGACTATTGAATCCATTTACTACTTTGTGGTGGGGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ATGTTCCTGAAGAATCCAAGGAGCTTCTCCTCCAGAGGGCCTTGGAGATCCCGTGTCCAGTCTACACAGTGTCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTCAACGCCAGAGGAGAAGGCACTATAGCTTTTCTAAAGGATCTGAGTGCCAAGACCCACAGCAGATTCCACGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATTTGCCGAGAGAACAGAGTGTGTAGAATTTCCTGCATTCTCCACAAAGGATGGTGACAATGTGATGACTTGGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATTCAAGGAAACTGAAAGGAAAACTCCCTCCAGGAGCTGGAGTCAGAGAGGACGTGTTTCTCGTTTGGCAAGAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATGGAGGAAGCCTGCAGCACGCTGGCCCAGATCCAGAGGCTGGTGGCCGAGCCTCCCAAGCCCGACGTGGCCAC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGTGGACTGCGAGTCAGAAACAACCTCTGTTGAGATTGCATCGAATCCAGAAGACACCTGGGACTCTAAGACAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGCTGCAGAAATATGGCTTGAAGGCCCAGAAGCTATCCTTGTATGATGTGCTTGCCGACTGCTCTTTCCGCCAC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GCTGATGGGGTTGTGGATATAAAAGCCAAACCGGAGAATGAGTCCGTGCAGACCAGTGCGGAGACGAACAAGAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GACAGTCCATGCAAAATATTGCAGCAGGTTTGTCCATGCTCCCTGGAAGGATGGGAGCTTGGTCCACGTCAACA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTACCAAAGAGAAGTGCAAGTGGTACAGTGAGAGAATCCACACAGCCCTGGCCCGGATCCGAAGGAGGATTAAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCTACATTCTCATTGACACGTC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TCACTCAATGAAGAGCAAACTGGACTTGGTGAAGGACAAGATCATTCAGTTCATACAGGAACAGCTGAAATATA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AAAGTAAGTTTAACTTTGTGAAGTTTGATGGTCAAGCAGTTGCTTGGCGGGAACAACTTGCTGAAGTCAATGAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GATAATTTGGAACAGGCTCAGTCCTGGATTAGAGACATAAAGATTGGAAGCTCCACAAACACCCTGAGTGCCCT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GAAAACTGCTTTTGCTGATAAAGAAACACAGGCAATCTACCTTCTGACCGATGGGAGACCTGATCAGCCACCTG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AAACAGTTATAGACCAGGTCAAACGTTTTCAGGAAATTCCTATTTATACCATCTCCTTCAATTACAATGATGAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ATTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATAATTTTGGTTGCAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGATCCCACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGACTCTTTTAGTTAAGGAAATGGAACAGGGTCACA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGGTACAATGCAGAAAAGGAT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGAGACAGCAAGCATCAAAAGGAAATCTGTTCTATGATTTCAACCCCAGAAAAGTGTGCAAAGCCTCAATCTGA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TGTCGATTCAACACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCTTTCAGATCAAAAGGTTCAGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AAAAGAAAGTCCTTCACGCAGAATCAACCAAAACCAGCCTGCTCAGAAGCCAGATGTCCTCCCTCAGGAGCTCA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GCTTGCAGTGAAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGAGGACTGCTCTAAGTGACAAAGAAATGAG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CATCTTGCTGGCTGAGGAGTGGCTGGATGACAAATCGTCAGAAAAGGTGACGCGAGAAGGAAGCCAGGTTTATG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 ACCACGATTCTTCAGATGTGTCTTCAGAAAACTGGCTGAAGACCTATGGCTTGGTCGCCAAGAAACTCACCCTC 2812
Query 1 -------------------------------------------AT------GGCCACGAAAGGCATG------- 18
|| |.||..||.|.|||||
Sbjct 2813 ATGGATGCCTTGTCAGTGGCAGCAGTCCCGCACAGCTCCACCTATGTTCCCGTCCTGGACAAGCATGTCGTGTC 2886
Query 19 --AGG---TTGAAATCCACAAAAGAGGTGTTCCCTCTGGCACATGTGTGCAACGACACAAATAAGATGACATTA 87
||| ||| |.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 TAAGGTCTTTG----------ATGAGGTGTTCCCTCTGGCACATGTGTGCAACGACACAAATAAGATGACATTA 2950
Query 88 ATTAACCCCCAAGGAGCCAAACTCAATATCTACAAGCGAAAAGTGGAACAGGCAATTCAATCCTATGAAAAGCG 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2951 ATTAACCCCCAAGGAGCCAAACTCAATATCTACAAGCGAAAAGTGGAACAGGCAATTCAATCCTATGAAAAGCG 3024
Query 162 CTTGAATAAAATTGTTTGGCGAGCATTATCTCAAGAGGAAAAAGAAAAGTTAGATGCAAACAAACCAATACAGT 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3025 CTTGAATAAAATTGTTTGGCGAGCATTATCTCAAGAGGAAAAAGAAAAGTTAGATGCAAACAAACCAATACAGT 3098
Query 236 ACTTGGAAAACAAAACAGTTTTAAACCAGGCTTTAGAACGGTTGAATTGGCCCATTTCACTGAAAGAGCTGTCG 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3099 ACTTGGAAAACAAAACAGTTTTAAACCAGGCTTTAGAACGGTTGAATTGGCCCATTTCACTGAAAGAGCTGTCG 3172
Query 310 ATGCTGGAAAGTGAAATCCTAGCTGGGAAAATGTACATCCAGCAGGCCATGGAACTCCAGGAGGCTGCCAAGAA 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3173 ATGCTGGAAAGTGAAATCCTAGCTGGGAAAATGTACATCCAGCAGGCCATGGAACTCCAGGAGGCTGCCAAGAA 3246
Query 384 GAATTATGCAAACAAGGCCCCGGGAGAGCAACAGAAATTGCAAGGAAATCCAACAAAGAAAACCAAATCAAAAA 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3247 GAATTATGCAAACAAGGCCCCGGGAGAGCAACAGAAATTGCAAGGAAATCCAACAAAGAAAACCAAATCAAAAA 3320
Query 458 GACCAGATCCCCTCAAAGGACAGAAGGTTATTGCAAGATGCGATGAAAATGGCTTTTATTTTCCAGGGGTTGTG 531
||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct 3321 GACCAGATCCCCTCAAAGGACAGAAGGTTATTGCAAGATGTGATGAAAATGGCTTTTATTTTCCAGGGGTTGTG 3394
Query 532 AAGAAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTTCAGTTACGGAGACACCAAGGTCGTGTCCACCTCCTT 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3395 AAGAAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTTCAGTTACGGAGACACCAAGGTCGTGTCCACCTCCTT 3468
Query 606 CATCACGCCTGTGGGGGGCGCCATGCCCTGCCCGCTGCTCCAGGTTGGAGATTATGTGTTTGCCAAAATTGTGA 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3469 CATCACGCCTGTGGGGGGCGCCATGCCCTGCCCGCTGCTCCAGGTTGGAGATTATGTGTTTGCCAAAATTGTGA 3542
Query 680 TACCCAAAGGATTTGACTTCTATGTCCCTGCCATTGTCATAGCACTTCCCAATAAGCATGTGGCCACAGAAAAA 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3543 TACCCAAAGGATTTGACTTCTATGTCCCTGCCATTGTCATAGCACTTCCCAATAAGCATGTGGCCACAGAAAAA 3616
Query 754 TTCTACACAGTTTTGAAGTGTAACAACCGGAGAGAATTTTGCCCTCGGAGTGCACTTATTAAGATCAGCCAAAA 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3617 TTCTACACAGTTTTGAAGTGTAACAACCGGAGAGAATTTTGCCCTCGGAGTGCACTTATTAAGATCAGCCAAAA 3690
Query 828 CAAGTATGCGCTCTCTTGCTCTCATATAAAGTCACCCCCAATTCCTGAGGGTCCAGAAGTAGAGGATGTGGAGG 901
||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 3691 CAAGTATGCGCTCTCTTGCTCTCATATAAAGTCACCCCCAATTCCTGAGGATCCAGAAGTAGAGGATGTGGAGG 3764
Query 902 CGAGGAACTCTGCTTTCCTCTTCTGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAGAG 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3765 CGAGGAACTCTGCTTTCCTCTTCTGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAGAG 3838
Query 976 AAGCCCAGGAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGACTCGGACGGCTCCTC 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3839 AAGCCCAGGAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGACTCGGACGGCTCCTC 3912
Query 1050 CCACGGCATCAGCTCCCATGGGTCCTGCCAGGGGACACACCCCGAGCCCAAGACAGCCCACCTCCACTTCCCCG 1123
||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 3913 CCACGGCATCAGCTCCCATGGGTCCTGCCAGGGGACACACCCCGAGCCCAGGACAGCCCACCTCCACTTCCCCG 3986
Query 1124 CGGCCGGGCGTCTAGGACTCAGCAGCCACGCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACT 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3987 CGGCCGGGCGTCTAGGACTCAGCAGCCACGCCATCATTGCCACACCTCCACCTCGAGCAGCCCTGCCCTGTACT 4060
Query 1198 CTCCAAGCCACCCACAGCAGCAAAGGGCTGAGGAGCGTCCCTGAGACACTT----------------------- 1248
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4061 CTCCAAGCCACCCACAGCAGCAAAGGGCTGAGGAGCGTCCCTGAGACACTTTAAGGCCGTCTGGTGGCAGCTAT 4134
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 4135 GTTTAAGAGACCAGCGTCCTTCCAGGCTGTTCAGACCTCAGCGTTGACACTGAAACTGGCCCCTCCGCGGAGTC 4208
Query 1249 ---------------------------------------------------------------------- 1248
Sbjct 4209 TGTTGTAGGTAACTCTAATTGAGCCCGAAACCAGAATAAAAACTCTTACATTGGAAACATTTCAAAACCA 4278
