Nucleotide Global Alignment
Description
- Query:
- TRCN0000471412
- Subject:
- NM_001331209.1
- Aligned Length:
- 2202
- Identities:
- 871
- Gaps:
- 1203
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGCGGCTGCTGCGGCTGTGGTGGGTTGGTTGGGCTGGGTGCTTGCCGCGTTCTGTCTGGGCAGCACCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGGGAGGCGGCGCCGGCGCCGGGCGCGGGACTGCTGAACTTCTGCACGGAAGAGGACAGCGCACCGGGCGCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCTCCCTGCGCGGAAGGGCAGCGCCAGAGGCCACTTTGTGCTTGCGACTCTTCTGCTCCGGCTTGGCCAACAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCTGGACCTGGGTAGCCGCCGAGGGCGCAGGCTGCCCGGAGGGCGGACGGGCCACGGAGCCCGAGGAGGCGGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGCCCCGACGGGCGAGTGGCGCGCGCTGCTGCGCCTGCGCGCCGAGGCCGGCCACCCGCGCTCCGCGCTGCTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGGTGCGCGTGGAGCCGGGTGGTGGGGCCGCGGAGGAGGCGGCGCCGCCCTGGGCGCTGGGGCTGGGGGCGGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGGCTGCTGGCCCTGGCGGCGGTGGCGCGCGGCCTGCAGCTGAGCGCGCTGGCGCTGGCGCCGGCCGAGGTGCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGTGCTGCGCGAGAGCGGCTCGGAGGCGGAGCGCGCGGCGGCGCGGCGCCTGGAACCCGCGCGGCGCTGGGCCG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCTGCGCCCTGGGCGCGCTGCTGCTTCTGGCCAGCCTGGCGCAGGCGGCACTGGCCGTGCTGCTGTACGGGGCG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCGGGCCAGCGCGCCGTGCCCGCCGTGCTGGGTTGCGCGGGGCTGGTGTTCCTGGTGGGTGAGGTGCTGCCGGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CGCCGTGAGCGGACGCTGGGCGCTGGCGCTGGCGCCGCGCGCGTTGGGCCTCAGCCGCCTGGCGGTGCTGCTCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCTTGCCCGTGGCGCTGCCGGTCGGGCAGCTGCTGGAGCTGGCAGCGCGGCCGGGGCGTCTGCGGGAGCGCGTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGGAGCTGGCGCGCGGCGGCGGCGACCCCTACAGCGACCTCAGCAAGGGAGTGCTGCGCTCCCGGACCGTGGA 962
Query 1 -------------------------------ATGCTGGACGCCAGCACCGTGCTGGACTTCGGCGTCCTGGCCA 43
|||||||||.||.||||.||.||.||||||.|||||||.||||
Sbjct 963 GGACGTGCTCACGCCGCTCGAAGACTGCTTTATGCTGGACTCCGGCACTGTCCTAGACTTCAGCGTCCTCGCCA 1036
Query 44 GCATCATGCAGAGCGGCCACACGCGCATCCCGGTGTACGAGGAGGAGCGCTCCAACATCGTGGACATGCTCTAC 117
|||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GCATCATGCAGAGCGGCCACACGCGCATCCCAGTGTACGAGGAGGAGCGCTCCAACATCGTGGACATGCTCTAC 1110
Query 118 CTCAAGGACTTGGCCTTCGTGGATCCCGAAGACTGCACGCCGCTCAGCACCATCACTCGTTTCTACAACCATCC 191
|||||.||||||||..||||.||.|||||.||||||||.|||||||||||||||||.||.||||||||||||||
Sbjct 1111 CTCAAAGACTTGGCTATCGTTGAGCCCGAGGACTGCACACCGCTCAGCACCATCACCCGCTTCTACAACCATCC 1184
Query 192 GCTCCACTTCGTCTTCAACGACACCAAGCTGGACGCTGTCCTGGAGGAATTCAAGCGAGG-------------- 251
.||||||||.|||||||||||.|||||.||||||||||||||||||||.|||||||||||
Sbjct 1185 ACTCCACTTTGTCTTCAACGATACCAAACTGGACGCTGTCCTGGAGGAGTTCAAGCGAGGCAAGTCCCACCTGG 1258
Query 252 ---------AGA----------------------------------------------------CACCGTGGTG 264
||| ||||.|||.|
Sbjct 1259 CCATTGTGCAGAAGGTGAACAATGAGGGCGAGGGCGACCCCTTCTACGAGGTGCTGGGCCTGGTCACCCTGGAG 1332
Query 265 AA-------GAGG--------AAGCCTG----CTT------CTCTGATG------------------------- 288
.| |||| |||.||| ||| .|||||.|
Sbjct 1333 GACGTCATCGAGGAGATCATCAAGTCTGAGATCTTGGATGAGTCTGAAGACTACTACACAAAGGTGAGGAAGAA 1406
Query 289 ----------------GCCCCTCTGAAGCGGAAGGAGGAGTTCTCCTTGTTCAAGGTGTCTGATGATGAATATA 346
||.|||||.|||||.||||||||.||||||||.|||||||||||||||||||||||||
Sbjct 1407 GACCGTCGCCCTGGGAGCTCCTCTCAAGCGAAAGGAGGAATTCTCCTTATTCAAGGTGTCTGATGATGAATATA 1480
Query 347 AAGTAACAATCTCGCCTCAGCTGCTCTTGGCCACCCAGCGCTTCCTGTCCCGAGAAGTGGATGTATTCAGCCCG 420
||||||.|||||||||||||||||||.|||||||||||||||||||.||||||||.||||||||.||||||||.
Sbjct 1481 AAGTAAAAATCTCGCCTCAGCTGCTCCTGGCCACCCAGCGCTTCCTTTCCCGAGAGGTGGATGTGTTCAGCCCA 1554
Query 421 CTGCGCATCTCTGAGAAGGTCCTGCTGCACCTGTTGAAGCATCCCAGTGTCAACCAGGAAGTGAGGTTTGACGA 494
.||||..||||||||||.|||.|||||||||||.|||||||||||||||||||||||||.||||.|||||||||
Sbjct 1555 TTGCGAGTCTCTGAGAAAGTCTTGCTGCACCTGCTGAAGCATCCCAGTGTCAACCAGGAGGTGACGTTTGACGA 1628
Query 495 GAGCAACCGGCTGGCCACACACCACTACCTGTACCAGCGCAGCCAGCCGGTGGATTACTTCATTCTCATCCTGC 568
|||||||||.||||||.|||||||.||.||||||||||||||||||||.||.|||||||||||||||||.||||
Sbjct 1629 GAGCAACCGCCTGGCCGCACACCATTATCTGTACCAGCGCAGCCAGCCAGTAGATTACTTCATTCTCATTCTGC 1702
Query 569 AGGGCAGGGTTGAAGTGGAGATCGGGAAAGAGGGTCTGAAGTTTGAGAATGGGGCCTTCACGTACTATGGAGTG 642
|||||||.||.||.||.||.||.|||||||||||.||||||||.|||||.||||||||||||||||||||||||
Sbjct 1703 AGGGCAGAGTCGAGGTCGAAATTGGGAAAGAGGGCCTGAAGTTCGAGAACGGGGCCTTCACGTACTATGGAGTG 1776
Query 643 TCGGCCCTAACTGTGCCATCCTCGGTTCACCAGTCCCCGGTGTCCTCGCTCCAGCCCATCCGCCATGACCTGCA 716
||.|||||.||.|..||||||||.|.||||||||||||.|||||.||.|.|||||.|||||||||||||.||||
Sbjct 1777 TCCGCCCTGACAGCCCCATCCTCAGCTCACCAGTCCCCAGTGTCTTCACGCCAGCTCATCCGCCATGACGTGCA 1850
Query 717 GCCCGACCCAGGTGACGGCACGCATTCATCTG--CGTATTGTCCCGACTACACCGTGAGGGCGCTCTCTGATCT 788
|||.||.||||..||.||.||.|..|| ||| |.||.|||||.||||||||.||||||||.||.||.||.||
Sbjct 1851 GCCTGAACCAGCCGATGGTACCCGCTC--CTGCACATACTGTCCTGACTACACTGTGAGGGCCCTTTCCGACCT 1922
Query 789 GCAGCTCATCAAGGTTACGCGACTGCAGTACCTCAATGCACTCCTGGCTACCCGAGCCCAGAACCTGCCACAGT 862
|||||||||.|||||.||.||.|||||||||||.||||||||||||||||||||||||||.|.|.||||.|..|
Sbjct 1923 GCAGCTCATTAAGGTCACACGGCTGCAGTACCTTAATGCACTCCTGGCTACCCGAGCCCAAAGCTTGCCTCCAT 1996
Query 863 CCCCTGAGAACACCGACCTGCAGGTTATTCCAGGCAGCCAGACCAGGCTCCTTGGTGAGAAGACCACCACAG-C 935
||||.||||||.|.||.||.||||.|||.|||||||||||||||||||||||||||||.|||.||| .|.|| |
Sbjct 1997 CCCCAGAGAACGCTGAGCTCCAGGCTATCCCAGGCAGCCAGACCAGGCTCCTTGGTGACAAGTCCA-GAGAGAC 2069
Query 936 GGCAGGGTCCAGCCACAGCAGGCCCAGCCTTCCCCTTCTCCCCCGGGGCAGGGACAGTGCGGCATATTCAGATT 1009
.||||||||||.|.|||||||.||||||.| |||.|.|.|||
Sbjct 2070 AGCAGGGTCCACCAACAGCAGACCCAGCAT-----------CCCAGTGGAGG---------------------- 2110
Query 1010 CAGACCTCTTTGGGCTGAGCCACCTTGTGAGTGCAGTTACTGCCTTTGTGTGGCCG 1065
|||.|.| |||||.|| |||..| |||||
Sbjct 2111 -AGAGCCC--TGGGCGGA---ACCCAG-GAGTG----------------------- 2136
