Nucleotide Global Alignment
Description
- Query:
- TRCN0000471511
- Subject:
- XR_001750326.2
- Aligned Length:
- 2213
- Identities:
- 236
- Gaps:
- 1960
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATCCGGTGCTGCAGTGAGGAGGTGGTTCTTGCCCGTGTTGTGTGTGTGTGTGAGTGAGAGAGCGAGTGAGTGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGAGTGAGTGTGTGTGTGGGGGGGACTCGGCTTGTTGTTGTCGGTGACTTCCCCCTCCCCTTCACCCCTTCCCC 148
Query 1 ------------------------------------------ATGAGCGATAACGATGACATCGAGGTGGAGAG 32
||||||||||||||||||||||||||||||||
Sbjct 149 TCCCCGCCGCCGCTGCAGTGGCCGCTCCCTGGGCCGTAGGAAATGAGCGATAACGATGACATCGAGGTGGAGAG 222
Query 33 CGACGAAGAGCAACCGAGGTTTCAATCTGCGGCTGACAAACGGGCTCATCATAATGCACTGGAACGAAAACGTA 106
|||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CGAC---------------------------GCTGACAAACGGGCTCATCATAATGCACTGGAACGAAAACGTA 269
Query 107 GGGACCACATCAAAGACAGCTTTCACAGTTTGCGGGACTCAGTCCCATCACTCCAAGGAGAGAAG--------- 171
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 270 GGGACCACATCAAAGACAGCTTTCACAGTTTGCGGGACTCAGTCCCATCACTCCAAGGAGAGAAGGCATCCCGG 343
Query 172 ---------CT-----------------------------------------------------------CTAT 177
|| .|||
Sbjct 344 GCCCAAATCCTAGACAAAGCCACAGAATATATCCAGTATATGCGAAGGAAAAACCACACACACCAGCAAGATAT 417
Query 178 T--------------------TCCTCTTTTGGA-----AATTGTGTACT-CCTG-------------TCCT-TC 211
| |.|||||.|||| || .|||..|| |||| .||| .|
Sbjct 418 TGACGACCTCAAGCGGCAGAATGCTCTTCTGGAGCAGCAA-GGTGCTCTGCCTGCAGTAGGGATCACACCTGGC 490
Query 212 ATC----GTC---AAAG---TTTGA------------------TGC----AGAAATGCCACACC---------- 243
||| ||| |||| ||||| ||| .|||| ||.|.|.|
Sbjct 491 ATCAGGTGTCTGAAAAGAGCTTTGAGGTCCTTGGAGTGGAATGTGCTGTGGGAAA-GCGAGAGCTGATCAAGTT 563
Query 244 ----------------TTCATTTCAAGCTACC----------AAG-TGCACAAGAAAAAAG-AATGCAAGATT- 288
||||.||| .||.|| ||| || ||||.||||.| |||||||| |
Sbjct 564 CTTTGTTCCTGGGGAATTCACTTC--TCTTCCTCCCTCATGGAAGATG--CAAGTAAAAGGAAATGCAAG--TA 631
Query 289 -------------------------------------------------------------------------- 288
Sbjct 632 ACCACCTGGTCCGTGCACTGGAGAAGGCGAGGTCAAGTGCCCAACTGCAGACCAACTACCCCTCCTCAGACAAC 705
Query 289 -------------------------------------------------------------------------- 288
Sbjct 706 AGCCTCTACACCAACGCCAAGGGCAGCACCATCTCTGCCTTCGATGGGGGCTCGGACTCCAGCTCGGAGTCTGA 779
Query 289 -------------------------------------------------------------------------- 288
Sbjct 780 GCCTGAAGAGCCCCAAAGCAGGAAGAAGCTCCGGATGGAGGCCAGCTAAGCCACTCGGGGCAGGCCAGCAATAA 853
Query 289 -------------------------------------------------------------------------- 288
Sbjct 854 AAACTGTCTGTCTCCATCGTCTCATCCTCCTTTCAGTTCGTTGGTAGAGCCCTCAGAACCATTTAAGAGACTCT 927
Query 289 -------------------------------------------------------------------------- 288
Sbjct 928 TTATTTTTCTCTTTCTCCCTTTTTTTTTTAAATTTTTATTTTTACGTAGAAGCTCTTGGACAACAGCTCTCGTT 1001
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1002 CTCCTTCCCCATTTCCACTGTATATTTTTTAATGTATTCCCTTCAGGGATTCCCTGTCCCCAACAGGAATTTTT 1075
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1076 AAACCAAAACACCCCAACTTGGCAGCTTTTTCTGTGGAGGACAGACGGCCGGCCGGACCTCTGAGCACATAGTG 1149
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1150 TCCTGCCCACCCTACCAGCTCCTCCAGCCCTGCCGGGCACATGCCCGGGGGACGCCTGCCCTGCCCAGGTGGCC 1223
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1224 TCCTGGCCCGCCCTCACCTCTGATAGACTTTGTGAATCTGAACTGCTCTACTTTGAGAAGATGACCGGTTTGGA 1297
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1298 GTAATCAGAATGAACCCTCCTCCTTTTTAAGGGTTTTTTTTTTTTCCTTTTTCTAAAAAGCTATGTATCGCTCC 1371
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1372 TATTGAAAGACCAGATCCTTAGAGAAGTTTGTGGTATAAAAAGGAAGTGGGGACAGATTCGCAGCACAGAGTCG 1445
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1446 CTGGCATGTTTCACTCCTGCTTCTCTCAGCCAGCTGTTTAAGCCTGCGGCGCCAGCCTCACGGAGGGCCGTGTG 1519
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1520 ACACTCTCGTGGTATGTATGGGAGATGGCAGCAGTGAAGCAGCAGCCACCAGGGAGTGGCCATTTGGGGTTGGG 1593
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1594 ACAGGGAGGGTGTTTTGGGTGGCATAGAGGTTTTGTATTGAGGGCCAGTGATGATGTTTTGATATTTATTTCCT 1667
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1668 GCTACTTAAATTTGAATCTGAGTGAATTGTACCTATTTCTGATGATGTCGGTCTTGCAAAGCGACAGATTCATA 1741
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1742 AAGTAATGATGAAATCTTTCTTTCTTCCCGTGTGTATTTCTAAGAAATAGAGCCAACTGATTTTGTATGTAAAT 1815
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1816 ACCAAGAGCAATTTACCTGGTACTAAACCCGCACCCCAGTGCGGACCCTTCCCAGCCCTCATCCCACTTCCTTT 1889
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1890 CCTACTGTCCTGGAACCTGTCTCCATTGTGTGATCCAGCCCTGGTTCTGGCTGTGGTCAGCAGATGCCAGTGAA 1963
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1964 GGGTTTTGTGTGTTTAGGCCTCATTTCTTTGTCTTTTTCCTACTCCGTTCCTGGCATTTGCTGATTTCTAGTGT 2037
Query 289 -------------------------------------------------------------------------- 288
Sbjct 2038 ATACTCTGTAGTCTCAGTTCGTGTTTGATTCCATTCCATGGAAATAAAAAGTATGTTGTACATACTGCCGAAGA 2111
Query 289 ------------------------------------------------------------------- 288
Sbjct 2112 ATTGTCTTGCAAGTTAAGGCTTCCCCCTTTACTATAAGACTATAAATAAAAACTTATTTTATCCTTC 2178
