Nucleotide Global Alignment

Description

Query:
TRCN0000471511
Subject:
XR_943450.3
Aligned Length:
2207
Identities:
263
Gaps:
1925

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTGCCGCCGTTGATCCGGTGCTGCAGTGAGGAGGTGGTTCTTGCCCGTGTTGTGTGTGTGTGTGAGTGAGAGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGAGTGAGTGAGTGAGTGAGTGTGTGTGTGGGGGGGACTCGGCTTGTTGTTGTCGGTGACTTCCCCCTCCCCTT  148

Query    1  ------------------------------------------------------ATGAGCGATAACGATGACAT  20
                                                                  ||||||||||||||||||||
Sbjct  149  CACCCCTTCCCCTCCCCGCCGCCGCTGCAGTGGCCGCTCCCTGGGCCGTAGGAAATGAGCGATAACGATGACAT  222

Query   21  CGAGGTGGAGAGCGACGAAGAGCAACCGAGGTTTCAATCTGCGGCTGACAAACGGGCTCATCATAATGCACTGG  94
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CGAGGTGGAGAGCGACGAAGAGCAACCGAGGTTTCAATCTGCGGCTGACAAACGGGCTCATCATAATGCACTGG  296

Query   95  AACGAAAACGTAGGGACCACATCAAAGACAGCTTTCACAGTTTGCGGGACTCAGTCCCATCACTCCAAGGAGAG  168
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AACGAAAACGTAGGGACCACATCAAAGACAGCTTTCACAGTTTGCGGGACTCAGTCCCATCACTCCAAGGAGAG  370

Query  169  AAG------------------CT---------------------------------------------------  173
            |||                  ||                                                   
Sbjct  371  AAGGCATCCCGGGCCCAAATCCTAGACAAAGCCACAGAATATATCCAGTATATGCGAAGGAAAAACCACACACA  444

Query  174  --------CTATT--------------------TCCTCTTTTGGA-----AATTGTGTACT-CCTG--------  205
                    .||||                    |.|||||.||||     || .|||..|| ||||        
Sbjct  445  CCAGCAAGATATTGACGACCTCAAGCGGCAGAATGCTCTTCTGGAGCAGCAA-GGTGCTCTGCCTGCAGTAGGG  517

Query  206  -----TCCT-TCATC----GTC---AAAG---TTTGA------------------TGC----AGAAATGCCACA  241
                 .||| .||||    |||   ||||   |||||                  |||    .|||| ||.|.|
Sbjct  518  ATCACACCTGGCATCAGGTGTCTGAAAAGAGCTTTGAGGTCCTTGGAGTGGAATGTGCTGTGGGAAA-GCGAGA  590

Query  242  CC--------------------------TTCATTTCAAGCTACC----------AAG-TGCACAAGAAAAAAGA  278
            .|                          ||||.|||  .||.||          ||| ||  ||||.||||.||
Sbjct  591  GCTGATCAAGTTCTTTGTTCCTGGGGAATTCACTTC--TCTTCCTCCCTCATGGAAGATG--CAAGTAAAAGGA  660

Query  279  A------TGCA----AGATT------------------------------------------------------  288
            |      ||||    |||..                                                      
Sbjct  661  AATTCCGTGCACTGGAGAAGGCGAGGTCAAGTGCCCAACTGCAGACCAACTACCCCTCCTCAGACAACAGCCTC  734

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  735  TACACCAACGCCAAGGGCAGCACCATCTCTGCCTTCGATGGGGGCTCGGACTCCAGCTCGGAGTCTGAGCCTGA  808

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  809  AGAGCCCCAAAGCAGGAAGAAGCTCCGGATGGAGGCCAGCTAAGCCACTCGGGGCAGGCCAGCAATAAAAACTG  882

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  883  TCTGTCTCCATCGTCTCATCCTCCTTTCAGTTCGTTGGTAGAGCCCTCAGAACCATTTAAGAGACTCTTTATTT  956

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  957  TTCTCTTTCTCCCTTTTTTTTTTAAATTTTTATTTTTACGTAGAAGCTCTTGGACAACAGCTCTCGTTCTCCTT  1030

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1031  CCCCATTTCCACTGTATATTTTTTAATGTATTCCCTTCAGGGATTCCCTGTCCCCAACAGGAATTTTTAAACCA  1104

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1105  AAACACCCCAACTTGGCAGCTTTTTCTGTGGAGGACAGACGGCCGGCCGGACCTCTGAGCACATAGTGTCCTGC  1178

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1179  CCACCCTACCAGCTCCTCCAGCCCTGCCGGGCACATGCCCGGGGGACGCCTGCCCTGCCCAGGTGGCCTCCTGG  1252

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1253  CCCGCCCTCACCTCTGATAGACTTTGTGAATCTGAACTGCTCTACTTTGAGAAGATGACCGGTTTGGAGTAATC  1326

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1327  AGAATGAACCCTCCTCCTTTTTAAGGGTTTTTTTTTTTTCCTTTTTCTAAAAAGCTATGTATCGCTCCTATTGA  1400

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1401  AAGACCAGATCCTTAGAGAAGTTTGTGGTATAAAAAGGAAGTGGGGACAGATTCGCAGCACAGAGTCGCTGGCA  1474

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1475  TGTTTCACTCCTGCTTCTCTCAGCCAGCTGTTTAAGCCTGCGGCGCCAGCCTCACGGAGGGCCGTGTGACACTC  1548

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1549  TCGTGGTATGTATGGGAGATGGCAGCAGTGAAGCAGCAGCCACCAGGGAGTGGCCATTTGGGGTTGGGACAGGG  1622

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1623  AGGGTGTTTTGGGTGGCATAGAGGTTTTGTATTGAGGGCCAGTGATGATGTTTTGATATTTATTTCCTGCTACT  1696

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1697  TAAATTTGAATCTGAGTGAATTGTACCTATTTCTGATGATGTCGGTCTTGCAAAGCGACAGATTCATAAAGTAA  1770

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1771  TGATGAAATCTTTCTTTCTTCCCGTGTGTATTTCTAAGAAATAGAGCCAACTGATTTTGTATGTAAATACCAAG  1844

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1845  AGCAATTTACCTGGTACTAAACCCGCACCCCAGTGCGGACCCTTCCCAGCCCTCATCCCACTTCCTTTCCTACT  1918

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1919  GTCCTGGAACCTGTCTCCATTGTGTGATCCAGCCCTGGTTCTGGCTGTGGTCAGCAGATGCCAGTGAAGGGTTT  1992

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1993  TGTGTGTTTAGGCCTCATTTCTTTGTCTTTTTCCTACTCCGTTCCTGGCATTTGCTGATTTCTAGTGTATACTC  2066

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 2067  TGTAGTCTCAGTTCGTGTTTGATTCCATTCCATGGAAATAAAAAGTATGTTGTACATACTGCCGAAGAATTGTC  2140

Query  289  -------------------------------------------------------------  288
                                                                         
Sbjct 2141  TTGCAAGTTAAGGCTTCCCCCTTTACTATAAGACTATAAATAAAAACTTATTTTATCCTTC  2201

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