Nucleotide Global Alignment

Description

Query:
TRCN0000471554
Subject:
NM_001347506.1
Aligned Length:
2021
Identities:
955
Gaps:
940

Alignment

Query    1  ATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGTGGAAGAAGAGGAGAGTGACGGGCTCCCAGCCTTTCACCTTCCCTTGCATGTGAGTTTTCCCAACAAGCCTC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACGCAAGAGACTTGTGGCCATAGGACTCCCACTTCTCAGCAC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AATACAATGGAAGTTGATGGCAATAAAGTTATGTCTTCATTTGCCCCACACAACTCATCTACCTCACCTCAGAA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GGCAGAAGAAGGTGGGCGACAGAGTGGCGAGTCCTTGTCTAGTACAGCCCTGGGAACTCCTGAACGGCGCAAGG  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  GCAGTTTAGCTGATGTTGTTGACACCTTGAAGCAGAGGAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGAA  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  ACCCCCAGTATTGAAAAACTACTCTCAAAGGACTGGAAAGACAAGCTTCTTGCAATGGGATCGGGGAACTTTGG  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  CGAAATAAAAGGGACTCCCGAGAGCTTAGCTGAGAAAGAAAGGCAACTCATGGGTATGATCAACCAGCTGACCA  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  GCCTCCGAGAGCAGCTGTTGGCTGCCCACGATGAGCAGAAGAAACTAGCTGCCTCTCAGATTGAGAAACAGCGT  666
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  667  CAGCAAATGG-AGCTG--GCCAAGCAGCAACAAGAACAAATTGCAAG----------ACAGCAGCAGCAGCTTC  727
                  |||| |||||  ||  .|||||||||           |.||          ||..||||.||||    
Sbjct    1  ------ATGGCAGCTGCTGC--TGCAGCAACA-----------CCAGGCTTAGGCCCACTCCAGCTGCAG----  51

Query  728  TACAGCAACAACACAAAATCAATTTGCTCCAGCAACAGATCC-AGGTTCAAGGTCAGCT--GCCGCCATTAATG  798
                            .||.||.|.|| |||||.||.||.|| |         ||||||  ||  |||..|   
Sbjct   52  ----------------GATGAAGTGGC-CCAGCCACTGAACCTA---------TCAGCTAAGC--CCAAGA---  94

Query  799  ATTCCCGTATTCCCTCCTGAT--CAACGGA-CACTGGCTGCAGCTGCCCAGCAAGGATTCCTCCTC-CCTC-CA  867
                        ||| |||||  |||   | |||   |||||.| .||||            |||| |||| ||
Sbjct   95  ------------CCT-CTGATGGCAA---ATCAC---CTGCATC-ACCCA------------CCTCTCCTCACA  136

Query  868  GGCTTCAGCT------ATAA-------GGCTGGATGTAGTGACCCTTACCCTGTTCAGCTGATCCCAACTACCA  928
            .||  |||||      ||||       ||||||         ||    ||||             |||      
Sbjct  137  TGC--CAGCTCTGAGAATAAACAGTGGGGCTGG---------CC----CCCT-------------CAA------  176

Query  929  TGGCAGCTGCTGCCGCAGCAACACCAGGCTTAGGCCCACTCCAACTGCAGCAGTT------ATATGC-------  989
                |||..|||.|.|.|||.||      ||||  |.|.|||..|||||..||||      |||.||       
Sbjct  177  ----AGCCTCTGTCCCGGCAGCA------TTAG--CTAGTCCTTCTGCAAGAGTTAGCACAATAGGCTATTTAA  238

Query  990  -TGCCCAGCTAGCTGCAATGCAGGTATCTCCAGGAGG--------GAAGCT-GCCAG--------GCATACCC-  1044
             ||.|||        |.||||   |.||.|||  |||        |||||| |||||        ||| ||.| 
Sbjct  239  ATGACCA--------CGATGC---TGTCACCA--AGGCAATCCAAGAAGCTCGCCAGATGAAAGAGCA-ACTCA  298

Query 1045  --CAAG----GCAA-------------------CCTTGGTGCTGCTGTATCTCCTACCAGCAT---TCACACAG  1090
              |.||    ||||                   ||.|||||              |.||||||   ||.|    
Sbjct  299  GGCGAGAGCAGCAAGCGTTGGACGGGAAGGTGGCCGTGGTG--------------AACAGCATAGGTCTC----  354

Query 1091  ACAAGAGCACAAACAGCC-CACCACCCAAAAGCAAGGAAAAAACAACACTGGAGAGTCTGACTCAGCAACTGGC  1163
                 |||   |||.||| .|     ||.||  |||||||||||||||||||||||.|||||||||||..||||
Sbjct  355  -----AGC---AACTGCCGGA-----CAGAA--AAGGAAAAAACAACACTGGAGAGCCTGACTCAGCAGTTGGC  413

Query 1164  AGTTAAACAGAATGAAGAAGGAAAATTTAGCCATGCAATGATGGATTTCAATCTGAGTGGAGATTCTGATGGAA  1237
            |||||||||||||||||||||.|||||||||||||.||||||||||||||||.||||||||||||||||.||||
Sbjct  414  AGTTAAACAGAATGAAGAAGGGAAATTTAGCCATGGAATGATGGATTTCAATATGAGTGGAGATTCTGACGGAA  487

Query 1238  GTGCTGGAGTCTCAGAGTCAAGAATTTATAGGGAATCCCGAGGGCGTGGTAGCAATGAACCCCACATAAAGCGT  1311
            |.||||||||||||||||||||||||||.|||||||||.|.||.|||||||||||.||.|||||||||||||||
Sbjct  488  GCGCTGGAGTCTCAGAGTCAAGAATTTACAGGGAATCCAGGGGACGTGGTAGCAACGAGCCCCACATAAAGCGT  561

Query 1312  CCAATGAATGCCTTCATGGTGTGGGCTAAAGATGAACGGAGAAAGATCCTTCAAGCCTTTCCTGACATGCACAA  1385
            ||||||||||||||||||||||||||.||||||||||||||.||.||||||||.||||||||.|||||||||||
Sbjct  562  CCAATGAATGCCTTCATGGTGTGGGCGAAAGATGAACGGAGGAAAATCCTTCAGGCCTTTCCCGACATGCACAA  635

Query 1386  CTCCAACATCAGCAAGATATTGGGATCTCGCTGGAAAGCTATGACAAACCTAGAGAAACAGCCATATTATGAGG  1459
            .||||||||||||||||||.|||||||||||||||||||||||||.||||||||||||||||||||.|||||||
Sbjct  636  TTCCAACATCAGCAAGATACTGGGATCTCGCTGGAAAGCTATGACCAACCTAGAGAAACAGCCATACTATGAGG  709

Query 1460  AGCAAGCCCGTCTCAGCAAGCAGCACCTGGAGAAGTACCCTGACTATAAGTACAAGCCCAGGCCAAAGCGCACC  1533
            ||||.|||||.||||||||.||||||||||||||||||||.|||||.|||||||||||.|||||||||||||||
Sbjct  710  AGCAGGCCCGCCTCAGCAAACAGCACCTGGAGAAGTACCCGGACTACAAGTACAAGCCTAGGCCAAAGCGCACC  783

Query 1534  TGCCTGGTGGATGGCAAAAAGCTGCGCATTGGTGAATACAAGGCAATCATGCGCAACAGGCGGCAGGAAATGCG  1607
            ||.||||||||.|||||.||.|||||.||.||.||.||||||||.||||||||.|||.||.|||||||||||||
Sbjct  784  TGTCTGGTGGACGGCAAGAAACTGCGTATCGGGGAGTACAAGGCCATCATGCGGAACCGGAGGCAGGAAATGCG  857

Query 1608  GCAGTACTTCAATGTTGGGCAACAAGCACAGATCCCCATTGCCACTGCTGGTGTTGTGTACCCTGGAGCCATCG  1681
            .|||||||||||.||||||||||||||||||||||||||.||.||.||.||.|||||.|||||..|.|||||||
Sbjct  858  ACAGTACTTCAACGTTGGGCAACAAGCACAGATCCCCATCGCGACGGCCGGAGTTGTATACCCCAGCGCCATCG  931

Query 1682  CCATGGCTGGGATGCCCTCCCCTCACCTGCCCTCGGAGCACTCAAGCGTGTCTAGCAGCCCAGAGCCTGGGATG  1755
            |||||||.||.|||||.|||||||||||||||||.||||||||.||||||||.||||||||.|||||.||||||
Sbjct  932  CCATGGCAGGAATGCCGTCCCCTCACCTGCCCTCCGAGCACTCGAGCGTGTCCAGCAGCCCGGAGCCCGGGATG  1005

Query 1756  CCTGTTATCCAGAGCACTTACGGTGTGAAAGGAGAGGAGCCACATATCAAAGAAGAGATACAGGCCGAGGACAT  1829
            ||.||.|||||||||||||||||.|..||.|||||||||||.||.|||||.||||||||.|||||.||||||||
Sbjct 1006  CCCGTGATCCAGAGCACTTACGGCGCCAAGGGAGAGGAGCCCCACATCAAGGAAGAGATCCAGGCTGAGGACAT  1079

Query 1830  CAATGGAGAAATTTATGATGAGTACGACGAGGAAGAGGATGATCCAGATGTAGATTATGGGAGTGACAGTGAAA  1903
            |||.|||||.|||||.||.||||||||.|||||.|||||.||.||.|||||.|||||||||||||||||.||||
Sbjct 1080  CAACGGAGAGATTTACGAGGAGTACGATGAGGAGGAGGAGGACCCGGATGTGGATTATGGGAGTGACAGCGAAA  1153

Query 1904  ACCATATTGCAGGACAAGCCAAC  1926
            ||||.|||||.||||||||||||
Sbjct 1154  ACCACATTGCGGGACAAGCCAAC  1176

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