Nucleotide Global Alignment

Description

Query:
TRCN0000471554
Subject:
XM_006506932.3
Aligned Length:
2373
Identities:
1743
Gaps:
447

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCAGATACCTGCTCTCCTCCACGCCTGGTTTCTGGAGTTTGAAGCTACAGAAACTTTGCCTGGGTTGCCAGG  74

Query    1  -------------------------------------------------ATGTCTTCCAAGCGACCAGCCTCTC  25
                                                             |||||||||||||||||||||||||
Sbjct   75  ACATTCAGAGCACTTTGTGGAAAGCAAGCTAGCACTGAGCCGGACAGAGATGTCTTCCAAGCGACCAGCCTCTC  148

Query   26  CGTATGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGGAAGAAGAGGAGAGTGACGGG  99
            ||||||||||..||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||..||
Sbjct  149  CGTATGGGGAGACAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGGAAGAGGAGGAGAGTGAGAGG  222

Query  100  CTCCCAGCCTTTCACCTTCCCTTGCATGTGAGTTTTCCCAACAAGCCTCACTCTGAGGAATTTCAGCCAGTTTC  173
            |||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CTCCCAGCCTTTCACCTTCCCTTACATGTGAGTTTTCCCAACAAGCCTCACTCTGAGGAATTTCAGCCAGTTTC  296

Query  174  TCTGCTGACGCAAGAGACTTGTGGCCATAGGACTCCCACTTCTCAGCACAATACAATGGAAGTTGATGGCAATA  247
            ||||||||||||||||||||||||.|.||||||.||||||...||||||||.|||||||||||.||||||||||
Sbjct  297  TCTGCTGACGCAAGAGACTTGTGGTCCTAGGACCCCCACTGTGCAGCACAACACAATGGAAGTCGATGGCAATA  370

Query  248  AAGTTATGTCTTCATTTGCCCCACACAACTCATCTACCTCACCTCAGAAGGCAGAAGAAGGTGGGCGACAGAGT  321
            ||||||||||||||||.||.|||.||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct  371  AAGTTATGTCTTCATTAGCTCCATACAACTCATCTACCTCACCTCAGAAGGCGGAAGAAGGTGGGCGACAGAGT  444

Query  322  GGCGAGTCCTTGTCTAGTACAGCCCTGGGAACTCCTGAACGGCGCAAGGGCAGTTTAGCTGATGTTGTTGACAC  395
            |||||||||.||||.||..||||||||||.|||||.||.||||||||||||||.|||||.|||||.||.|||||
Sbjct  445  GGCGAGTCCGTGTCGAGCGCAGCCCTGGGGACTCCCGAGCGGCGCAAGGGCAGCTTAGCGGATGTGGTGGACAC  518

Query  396  CTTGAAGCAGAGGAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGAAACCCCCAGTATTGAAAAACTACTCT  469
            |.|||||||||||||.|||||||||||.|||||.||.|||||.|||||.||.||||||||||||||.|||||||
Sbjct  519  CCTGAAGCAGAGGAAGATGGAAGAGCTGATCAAGAATGAGCCAGAAGACACTCCCAGTATTGAAAAGCTACTCT  592

Query  470  CAAAGGACTGGAAAGACAAGCTTCTTGCAATGGGATCGGGGAACTTTGGCGAAATAAAAGGGACTCCCGAGAGC  543
            |.||||||||||||||||||||.||.|||||||||||.|||||||||||.|||||||||||||||||.||||||
Sbjct  593  CCAAGGACTGGAAAGACAAGCTCCTGGCAATGGGATCAGGGAACTTTGGAGAAATAAAAGGGACTCCTGAGAGC  666

Query  544  TTAGCTGAGAAAGAAAGGCAACTCATGGGTATGATCAACCAGCTGACCAGCCTCCGAGAGCAGCTGTTGGCTGC  617
            .|.||||||||.||..||||.|||||||||||||||||.|||||||||||.||.||.|||||.||..|||||||
Sbjct  667  CTCGCTGAGAAGGAGCGGCAGCTCATGGGTATGATCAATCAGCTGACCAGTCTACGGGAGCAACTCCTGGCTGC  740

Query  618  CCACGATGAGCAGAAGAAACTAGCTGCCTCTCAGATTGAGAAACAGCGTCAGCAAATGGAGCTGGCCAAGCAGC  691
            ||||||||||||||||||..|.|||||.||||||||.|||||||||||||||||.|||||||||||||||||||
Sbjct  741  CCACGATGAGCAGAAGAAGTTGGCTGCATCTCAGATAGAGAAACAGCGTCAGCAGATGGAGCTGGCCAAGCAGC  814

Query  692  AACAAGAACAAATTGCAAGACAGCAGCAGCAGCTTCTACAGCAACAACACAAAATCAATTTGCTCCAGCAACAG  765
            ||||.||.||.||.||.||.||.||||||||||||||.||||||||||||||||||||.|||||.|||||||||
Sbjct  815  AACAGGAGCAGATCGCGAGGCAACAGCAGCAGCTTCTGCAGCAACAACACAAAATCAACTTGCTTCAGCAACAG  888

Query  766  ATCCAGGTTCAAGGTCAGCTGCCGCCATTAATGATTCCCGTATTCCCTCCTGATCAACGGACACTGGCTGCAGC  839
            |||||||||||||||||||||||||||||.|||||||||||.|||||||||||.||.|||||.||.||.|||||
Sbjct  889  ATCCAGGTTCAAGGTCAGCTGCCGCCATTGATGATTCCCGTGTTCCCTCCTGACCAGCGGACCCTCGCAGCAGC  962

Query  840  TGCCCAGCAAGGATTCCTCCTCCCTCCAGGCTTCAGCTATAAGGCTGGATGTAGTGACCCTTACCCTGTTCAGC  913
            |||||||||||||||||||||.|||||.||.||||||||.||||||||.||.||||||||||||||||||||||
Sbjct  963  TGCCCAGCAAGGATTCCTCCTTCCTCCTGGTTTCAGCTACAAGGCTGGGTGCAGTGACCCTTACCCTGTTCAGC  1036

Query  914  TGATCCCAACTACCATGGCAGCTGCTGCCGCAGCAACACCAGGCTTAGGCCCACTCCAACTGCAGCAGTTATAT  987
            ||||||||||.||.||||||||||||||.|||||||||||||||||||||||||||||.|||||||||||.|||
Sbjct 1037  TGATCCCAACCACTATGGCAGCTGCTGCTGCAGCAACACCAGGCTTAGGCCCACTCCAGCTGCAGCAGTTCTAT  1110

Query  988  GCTGCCCAGCTAGCTGCAATGCAGGTATCTCCAGGAGGGAAGCTGCCAGGCATACCCCAAGGCAACCTTGGTGC  1061
            ||||||||||||||.|||||||||||.|||||||||||||||||.|.||||.||||||||||||||||||||||
Sbjct 1111  GCTGCCCAGCTAGCCGCAATGCAGGTTTCTCCAGGAGGGAAGCTCCTAGGCCTACCCCAAGGCAACCTTGGTGC  1184

Query 1062  TGCTGTATCTCCTACCAGCATTCACACAGACAAGAGCACAAACAGCCCACCACCCAAAAGC-------------  1122
            |||.||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||             
Sbjct 1185  TGCCGTGTCTCCTACCAGCATTCACACAGACAAGAGCACAAACAGTCCACCACCCAAAAGCAAGGATGAAGTGG  1258

Query 1123  --------------------------------------------------------------------------  1122
                                                                                      
Sbjct 1259  CCCAGCCACTGAACCTATCAGCTAAGCCCAAGACCTCTGATGGCAAATCACCTGCATCACCCACCTCTCCTCAC  1332

Query 1123  --------------------------------------------------------------------------  1122
                                                                                      
Sbjct 1333  ATGCCAGCTCTGAGAATAAACAGTGGGGCTGGCCCCCTCAAAGCCTCTGTCCCGGCAGCATTAGCTAGTCCTTC  1406

Query 1123  --------------------------------------------------------------------------  1122
                                                                                      
Sbjct 1407  TGCAAGAGTTAGCACAATAGGCTATTTAAATGACCACGATGCTGTCACCAAGGCAATCCAAGAAGCTCGCCAGA  1480

Query 1123  --------------------------------------------------------------------------  1122
                                                                                      
Sbjct 1481  TGAAAGAGCAACTCAGGCGAGAGCAGCAAGCGTTGGACGGGAAGGTGGCCGTGGTGAACAGCATAGGTCTCAGC  1554

Query 1123  ---------------AAGGAAAAAACAACACTGGAGAGTCTGACTCAGCAACTGGCAGTTAAACAGAATGAAGA  1181
                           |||||||||||||||||||||||.|||||||||||..||||||||||||||||||||||
Sbjct 1555  AACTGCCGGACAGAAAAGGAAAAAACAACACTGGAGAGCCTGACTCAGCAGTTGGCAGTTAAACAGAATGAAGA  1628

Query 1182  AGGAAAATTTAGCCATGCAATGATGGATTTCAATCTGAGTGGAGATTCTGATGGAAGTGCTGGAGTCTCAGAGT  1255
            |||.|||||||||||||.||||||||||||||||.||||||||||||||||.|||||.||||||||||||||||
Sbjct 1629  AGGGAAATTTAGCCATGGAATGATGGATTTCAATATGAGTGGAGATTCTGACGGAAGCGCTGGAGTCTCAGAGT  1702

Query 1256  CAAGAATTTATAGGGAATCCCGAGGGCGTGGTAGCAATGAACCCCACATAAAGCGTCCAATGAATGCCTTCATG  1329
            ||||||||||.|||||||||.|.||.|||||||||||.||.|||||||||||||||||||||||||||||||||
Sbjct 1703  CAAGAATTTACAGGGAATCCAGGGGACGTGGTAGCAACGAGCCCCACATAAAGCGTCCAATGAATGCCTTCATG  1776

Query 1330  GTGTGGGCTAAAGATGAACGGAGAAAGATCCTTCAAGCCTTTCCTGACATGCACAACTCCAACATCAGCAAGAT  1403
            ||||||||.||||||||||||||.||.||||||||.||||||||.|||||||||||.|||||||||||||||||
Sbjct 1777  GTGTGGGCGAAAGATGAACGGAGGAAAATCCTTCAGGCCTTTCCCGACATGCACAATTCCAACATCAGCAAGAT  1850

Query 1404  ATTGGGATCTCGCTGGAAAGCTATGACAAACCTAGAGAAACAGCCATATTATGAGGAGCAAGCCCGTCTCAGCA  1477
            |.|||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||.|||||.|||||||
Sbjct 1851  ACTGGGATCTCGCTGGAAAGCTATGACCAACCTAGAGAAACAGCCATACTATGAGGAGCAGGCCCGCCTCAGCA  1924

Query 1478  AGCAGCACCTGGAGAAGTACCCTGACTATAAGTACAAGCCCAGGCCAAAGCGCACCTGCCTGGTGGATGGCAAA  1551
            |.||||||||||||||||||||.|||||.|||||||||||.|||||||||||||||||.||||||||.|||||.
Sbjct 1925  AACAGCACCTGGAGAAGTACCCGGACTACAAGTACAAGCCTAGGCCAAAGCGCACCTGTCTGGTGGACGGCAAG  1998

Query 1552  AAGCTGCGCATTGGTGAATACAAGGCAATCATGCGCAACAGGCGGCAGGAAATGCGGCAGTACTTCAATGTTGG  1625
            ||.|||||.||.||.||.||||||||.||||||||.|||.||.|||||||||||||.|||||||||||.|||||
Sbjct 1999  AAACTGCGTATCGGGGAGTACAAGGCCATCATGCGGAACCGGAGGCAGGAAATGCGACAGTACTTCAACGTTGG  2072

Query 1626  GCAACAAGCACAGATCCCCATTGCCACTGCTGGTGTTGTGTACCCTGGAGCCATCGCCATGGCTGGGATGCCCT  1699
            |||||||||||||||||||||.||.||.||.||.|||||.|||||..|.||||||||||||||.||.|||||.|
Sbjct 2073  GCAACAAGCACAGATCCCCATCGCGACGGCCGGAGTTGTATACCCCAGCGCCATCGCCATGGCAGGAATGCCGT  2146

Query 1700  CCCCTCACCTGCCCTCGGAGCACTCAAGCGTGTCTAGCAGCCCAGAGCCTGGGATGCCTGTTATCCAGAGCACT  1773
            ||||||||||||||||.||||||||.||||||||.||||||||.|||||.||||||||.||.||||||||||||
Sbjct 2147  CCCCTCACCTGCCCTCCGAGCACTCGAGCGTGTCCAGCAGCCCGGAGCCCGGGATGCCCGTGATCCAGAGCACT  2220

Query 1774  TACGGTGTGAAAGGAGAGGAGCCACATATCAAAGAAGAGATACAGGCCGAGGACATCAATGGAGAAATTTATGA  1847
            |||||.|..||.|||||||||||.||.|||||.||||||||.|||||.|||||||||||.|||||.|||||.||
Sbjct 2221  TACGGCGCCAAGGGAGAGGAGCCCCACATCAAGGAAGAGATCCAGGCTGAGGACATCAACGGAGAGATTTACGA  2294

Query 1848  TGAGTACGACGAGGAAGAGGATGATCCAGATGTAGATTATGGGAGTGACAGTGAAAACCATATTGCAGGACAAG  1921
            .||||||||.|||||.|||||.||.||.|||||.|||||||||||||||||.||||||||.|||||.|||||||
Sbjct 2295  GGAGTACGATGAGGAGGAGGAGGACCCGGATGTGGATTATGGGAGTGACAGCGAAAACCACATTGCGGGACAAG  2368

Query 1922  CCAAC  1926
            |||||
Sbjct 2369  CCAAC  2373

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