Nucleotide Global Alignment
Description
- Query:
- TRCN0000471554
- Subject:
- XM_006506944.3
- Aligned Length:
- 2254
- Identities:
- 978
- Gaps:
- 1172
Alignment
Query 1 ATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGTGGAAGAAGAGGAGAGTGACGGGCTCCCAGCCTTTCACCTTCCCTTGCATGTGAGTTTTCCCAACAAGCCTC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACGCAAGAGACTTGTGGCCATAGGACTCCCACTTCTCAGCAC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AATACAATGGAAGTTGATGGCAATAAAGTTATGTCTTCATTTGCCCCACACAACTCATCTACCTCACCTCAGAA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GGCAGAAGAAGGTGGGCGACAGAGTGGCGAGTCCTTGTCTAGTACAGCCCTGGGAACTCCTGAACGGCGCAAGG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GCAGTTTAGCTGATGTTGTTGACACCTTGAAGCAGAGGAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGAA 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 ACCCCCAGTATTGAAAAACTACTCTCAAAGGACTGGAAAGACAAGCTTCTTGCAATGGGATCGGGGAACTTTGG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CGAAATAAAAGGGACTCCCGAGAGCTTAGCTGAGAAAGAAAGGCAACTCATGGGTATGATCAACCAGCTGACCA 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GCCTCCGAGAGCAGCTGTTGGCTGCCCACGATGAGCAGAAGAAACTAGCTGCCTCTCAGATTGAGAAACAGCGT 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CAGCAAATGGAGCTGGCCAAGCAGCAACAAGAACAAATTGCAAGACAGCAGCAGCAGCTTCTACAGCAACAACA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 CAAAATCAATTTGCTCCAGCAACAGATCCAGGTTCAAGGTCAGCTGCCGCCA--TTAATGATTCCCGTATTCCC 812
| |||.|||.||
Sbjct 1 ---------------------------------------------------ATGTTACTGAGTC---------- 13
Query 813 TCCTGATCAACGGACACTGGCTGCAGCTGCCCAGCAAGGATTCCTCCTC-CCTCCAGGCTT-CAGCTATAAGGC 884
||| .||||.|| ||| ||||.|.|.||| ||| ||| || |||
Sbjct 14 ------TCA--------GGGCTTCA-CTG--------GGATGCGTGCTCACCT-----CTTGCA-----AAG-- 52
Query 885 TGGATGTAGTGACCCTTACCCTGTTCAGCTGATCCCAACTACCATGGCAGCTGCTGCCGCAGCAACACCAGGCT 958
|||||||||||||||||||||||||||||||.||.||||||||||||||.||||||||||||||||
Sbjct 53 --------GTGACCCTTACCCTGTTCAGCTGATCCCAACCACTATGGCAGCTGCTGCTGCAGCAACACCAGGCT 118
Query 959 TAGGCCCACTCCAACTGCAGCAGTTATATGCTGCCCAGCTAGCTGCAATGCAGGTATCTCCAGGAGGGAAGCTG 1032
|||||||||||||.|||||||||||.|||||||||||||||||.|||||||||||.|||||||||||||||||.
Sbjct 119 TAGGCCCACTCCAGCTGCAGCAGTTCTATGCTGCCCAGCTAGCCGCAATGCAGGTTTCTCCAGGAGGGAAGCTC 192
Query 1033 CCAGGCATACCCCAAGGCAACCTTGGTGCTGCTGTATCTCCTACCAGCATTCACACAGACAAGAGCACAAACAG 1106
|.||||.|||||||||||||||||||||||||.||.||||||||||||||||||||||||||||||||||||||
Sbjct 193 CTAGGCCTACCCCAAGGCAACCTTGGTGCTGCCGTGTCTCCTACCAGCATTCACACAGACAAGAGCACAAACAG 266
Query 1107 CCCACCACCCAAAAGC---------------------------------------------------------- 1122
.|||||||||||||||
Sbjct 267 TCCACCACCCAAAAGCAAGGATGAAGTGGCCCAGCCACTGAACCTATCAGCTAAGCCCAAGACCTCTGATGGCA 340
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 341 AATCACCTGCATCACCCACCTCTCCTCACATGCCAGCTCTGAGAATAAACAGTGGGGCTGGCCCCCTCAAAGCC 414
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 415 TCTGTCCCGGCAGCATTAGCTAGTCCTTCTGCAAGAGTTAGCACAATAGGCTATTTAAATGACCACGATGCTGT 488
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 489 CACCAAGGCAATCCAAGAAGCTCGCCAGATGAAAGAGCAACTCAGGCGAGAGCAGCAAGCGTTGGACGGGAAGG 562
Query 1123 --------------------------------------------AAGGAAAAAACAACACTGGAGAGTCTGACT 1152
|||||||||||||||||||||||.||||||
Sbjct 563 TGGCCGTGGTGAACAGCATAGGTCTCAGCAACTGCCGGACAGAAAAGGAAAAAACAACACTGGAGAGCCTGACT 636
Query 1153 CAGCAACTGGCAGTTAAACAGAATGAAGAAGGAAAATTTAGCCATGCAATGATGGATTTCAATCTGAGTGGAGA 1226
|||||..|||||||||||||||||||||||||.|||||||||||||.||||||||||||||||.||||||||||
Sbjct 637 CAGCAGTTGGCAGTTAAACAGAATGAAGAAGGGAAATTTAGCCATGGAATGATGGATTTCAATATGAGTGGAGA 710
Query 1227 TTCTGATGGAAGTGCTGGAGTCTCAGAGTCAAGAATTTATAGGGAATCCCGAGGGCGTGGTAGCAATGAACCCC 1300
||||||.|||||.||||||||||||||||||||||||||.|||||||||.|.||.|||||||||||.||.||||
Sbjct 711 TTCTGACGGAAGCGCTGGAGTCTCAGAGTCAAGAATTTACAGGGAATCCAGGGGACGTGGTAGCAACGAGCCCC 784
Query 1301 ACATAAAGCGTCCAATGAATGCCTTCATGGTGTGGGCTAAAGATGAACGGAGAAAGATCCTTCAAGCCTTTCCT 1374
|||||||||||||||||||||||||||||||||||||.||||||||||||||.||.||||||||.||||||||.
Sbjct 785 ACATAAAGCGTCCAATGAATGCCTTCATGGTGTGGGCGAAAGATGAACGGAGGAAAATCCTTCAGGCCTTTCCC 858
Query 1375 GACATGCACAACTCCAACATCAGCAAGATATTGGGATCTCGCTGGAAAGCTATGACAAACCTAGAGAAACAGCC 1448
|||||||||||.||||||||||||||||||.|||||||||||||||||||||||||.|||||||||||||||||
Sbjct 859 GACATGCACAATTCCAACATCAGCAAGATACTGGGATCTCGCTGGAAAGCTATGACCAACCTAGAGAAACAGCC 932
Query 1449 ATATTATGAGGAGCAAGCCCGTCTCAGCAAGCAGCACCTGGAGAAGTACCCTGACTATAAGTACAAGCCCAGGC 1522
|||.|||||||||||.|||||.||||||||.||||||||||||||||||||.|||||.|||||||||||.||||
Sbjct 933 ATACTATGAGGAGCAGGCCCGCCTCAGCAAACAGCACCTGGAGAAGTACCCGGACTACAAGTACAAGCCTAGGC 1006
Query 1523 CAAAGCGCACCTGCCTGGTGGATGGCAAAAAGCTGCGCATTGGTGAATACAAGGCAATCATGCGCAACAGGCGG 1596
|||||||||||||.||||||||.|||||.||.|||||.||.||.||.||||||||.||||||||.|||.||.||
Sbjct 1007 CAAAGCGCACCTGTCTGGTGGACGGCAAGAAACTGCGTATCGGGGAGTACAAGGCCATCATGCGGAACCGGAGG 1080
Query 1597 CAGGAAATGCGGCAGTACTTCAATGTTGGGCAACAAGCACAGATCCCCATTGCCACTGCTGGTGTTGTGTACCC 1670
|||||||||||.|||||||||||.||||||||||||||||||||||||||.||.||.||.||.|||||.|||||
Sbjct 1081 CAGGAAATGCGACAGTACTTCAACGTTGGGCAACAAGCACAGATCCCCATCGCGACGGCCGGAGTTGTATACCC 1154
Query 1671 TGGAGCCATCGCCATGGCTGGGATGCCCTCCCCTCACCTGCCCTCGGAGCACTCAAGCGTGTCTAGCAGCCCAG 1744
..|.||||||||||||||.||.|||||.|||||||||||||||||.||||||||.||||||||.||||||||.|
Sbjct 1155 CAGCGCCATCGCCATGGCAGGAATGCCGTCCCCTCACCTGCCCTCCGAGCACTCGAGCGTGTCCAGCAGCCCGG 1228
Query 1745 AGCCTGGGATGCCTGTTATCCAGAGCACTTACGGTGTGAAAGGAGAGGAGCCACATATCAAAGAAGAGATACAG 1818
||||.||||||||.||.|||||||||||||||||.|..||.|||||||||||.||.|||||.||||||||.|||
Sbjct 1229 AGCCCGGGATGCCCGTGATCCAGAGCACTTACGGCGCCAAGGGAGAGGAGCCCCACATCAAGGAAGAGATCCAG 1302
Query 1819 GCCGAGGACATCAATGGAGAAATTTATGATGAGTACGACGAGGAAGAGGATGATCCAGATGTAGATTATGGGAG 1892
||.|||||||||||.|||||.|||||.||.||||||||.|||||.|||||.||.||.|||||.|||||||||||
Sbjct 1303 GCTGAGGACATCAACGGAGAGATTTACGAGGAGTACGATGAGGAGGAGGAGGACCCGGATGTGGATTATGGGAG 1376
Query 1893 TGACAGTGAAAACCATATTGCAGGACAAGCCAAC 1926
||||||.||||||||.|||||.||||||||||||
Sbjct 1377 TGACAGCGAAAACCACATTGCGGGACAAGCCAAC 1410
