Nucleotide Global Alignment
Description
- Query:
- TRCN0000471554
- Subject:
- XM_006506945.3
- Aligned Length:
- 2250
- Identities:
- 904
- Gaps:
- 1251
Alignment
Query 1 ATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGTGGAAGAAGAGGAGAGTGACGGGCTCCCAGCCTTTCACCTTCCCTTGCATGTGAGTTTTCCCAACAAGCCTC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACGCAAGAGACTTGTGGCCATAGGACTCCCACTTCTCAGCAC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AATACAATGGAAGTTGATGGCAATAAAGTTATGTCTTCATTTGCCCCACACAACTCATCTACCTCACCTCAGAA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GGCAGAAGAAGGTGGGCGACAGAGTGGCGAGTCCTTGTCTAGTACAGCCCTGGGAACTCCTGAACGGCGCAAGG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GCAGTTTAGCTGATGTTGTTGACACCTTGAAGCAGAGGAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGAA 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 ACCCCCAGTATTGAAAAACTACTCTCAAAGGACTGGAAAGACAAGCTTCTTGCAATGGGATCGGGGAACTTTGG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CGAAATAAAAGGGACTCCCGAGAGCTTAGCTGAGAAAGAAAGGCAACTCATGGGTATGATCAACCAGCTGACCA 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GCCTCCGAGAGCAGCTGTTGGCTGCCCACGATGAGCAGAAGAAACTAGCTGCCTCTCAGATTGAGAAACAGCGT 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CAGCAAATGGAGCTGGCCAAGCAGCAACAAGAACAAATTGCAAGACAGCAGCAGCAGCTTCTACAGCAACAACA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 CAAAATCAATTTGCTCCAGCAACAGATCCAGGTTCAAGGTCAGCTGCCGCCATTAATGATTCCCGTATTCCCTC 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 CTGATCAACGGACACTGGCTGCAGCTGCCCAGCAAGGATTCCTCCTCCCTCCAGGCTTCAGCTATAAGGCTGGA 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 TGTAGTGACCCTTACCCTGTTCAGCTGATCCCAACTACCATGGCAGCTGCTGCCGCAGCAACACCAGGCTTAGG 962
||||||||||||||.||||||||||||||||||||
Sbjct 1 ---------------------------------------ATGGCAGCTGCTGCTGCAGCAACACCAGGCTTAGG 35
Query 963 CCCACTCCAACTGCAGCAGTTATATGCTGCCCAGCTAGCTGCAATGCAGGTATCTCCAGGAGGGAAGCTGCCAG 1036
|||||||||.|||||||||||.|||||||||||||||||.|||||||||||.|||||||||||||||||.|.||
Sbjct 36 CCCACTCCAGCTGCAGCAGTTCTATGCTGCCCAGCTAGCCGCAATGCAGGTTTCTCCAGGAGGGAAGCTCCTAG 109
Query 1037 GCATACCCCAAGGCAACCTTGGTGCTGCTGTATCTCCTACCAGCATTCACACAGACAAGAGCACAAACAGCCCA 1110
||.|||||||||||||||||||||||||.||.||||||||||||||||||||||||||||||||||||||.|||
Sbjct 110 GCCTACCCCAAGGCAACCTTGGTGCTGCCGTGTCTCCTACCAGCATTCACACAGACAAGAGCACAAACAGTCCA 183
Query 1111 CCACCCAAAAGC-------------------------------------------------------------- 1122
||||||||||||
Sbjct 184 CCACCCAAAAGCAAGGATGAAGTGGCCCAGCCACTGAACCTATCAGCTAAGCCCAAGACCTCTGATGGCAAATC 257
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 258 ACCTGCATCACCCACCTCTCCTCACATGCCAGCTCTGAGAATAAACAGTGGGGCTGGCCCCCTCAAAGCCTCTG 331
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 332 TCCCGGCAGCATTAGCTAGTCCTTCTGCAAGAGTTAGCACAATAGGCTATTTAAATGACCACGATGCTGTCACC 405
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 406 AAGGCAATCCAAGAAGCTCGCCAGATGAAAGAGCAACTCAGGCGAGAGCAGCAAGCGTTGGACGGGAAGGTGGC 479
Query 1123 ----------------------------------------AAGGAAAAAACAACACTGGAGAGTCTGACTCAGC 1156
|||||||||||||||||||||||.||||||||||
Sbjct 480 CGTGGTGAACAGCATAGGTCTCAGCAACTGCCGGACAGAAAAGGAAAAAACAACACTGGAGAGCCTGACTCAGC 553
Query 1157 AACTGGCAGTTAAACAGAATGAAGAAGGAAAATTTAGCCATGCAATGATGGATTTCAATCTGAGTGGAGATTCT 1230
|..|||||||||||||||||||||||||.|||||||||||||.||||||||||||||||.||||||||||||||
Sbjct 554 AGTTGGCAGTTAAACAGAATGAAGAAGGGAAATTTAGCCATGGAATGATGGATTTCAATATGAGTGGAGATTCT 627
Query 1231 GATGGAAGTGCTGGAGTCTCAGAGTCAAGAATTTATAGGGAATCCCGAGGGCGTGGTAGCAATGAACCCCACAT 1304
||.|||||.||||||||||||||||||||||||||.|||||||||.|.||.|||||||||||.||.||||||||
Sbjct 628 GACGGAAGCGCTGGAGTCTCAGAGTCAAGAATTTACAGGGAATCCAGGGGACGTGGTAGCAACGAGCCCCACAT 701
Query 1305 AAAGCGTCCAATGAATGCCTTCATGGTGTGGGCTAAAGATGAACGGAGAAAGATCCTTCAAGCCTTTCCTGACA 1378
|||||||||||||||||||||||||||||||||.||||||||||||||.||.||||||||.||||||||.||||
Sbjct 702 AAAGCGTCCAATGAATGCCTTCATGGTGTGGGCGAAAGATGAACGGAGGAAAATCCTTCAGGCCTTTCCCGACA 775
Query 1379 TGCACAACTCCAACATCAGCAAGATATTGGGATCTCGCTGGAAAGCTATGACAAACCTAGAGAAACAGCCATAT 1452
|||||||.||||||||||||||||||.|||||||||||||||||||||||||.||||||||||||||||||||.
Sbjct 776 TGCACAATTCCAACATCAGCAAGATACTGGGATCTCGCTGGAAAGCTATGACCAACCTAGAGAAACAGCCATAC 849
Query 1453 TATGAGGAGCAAGCCCGTCTCAGCAAGCAGCACCTGGAGAAGTACCCTGACTATAAGTACAAGCCCAGGCCAAA 1526
|||||||||||.|||||.||||||||.||||||||||||||||||||.|||||.|||||||||||.||||||||
Sbjct 850 TATGAGGAGCAGGCCCGCCTCAGCAAACAGCACCTGGAGAAGTACCCGGACTACAAGTACAAGCCTAGGCCAAA 923
Query 1527 GCGCACCTGCCTGGTGGATGGCAAAAAGCTGCGCATTGGTGAATACAAGGCAATCATGCGCAACAGGCGGCAGG 1600
|||||||||.||||||||.|||||.||.|||||.||.||.||.||||||||.||||||||.|||.||.||||||
Sbjct 924 GCGCACCTGTCTGGTGGACGGCAAGAAACTGCGTATCGGGGAGTACAAGGCCATCATGCGGAACCGGAGGCAGG 997
Query 1601 AAATGCGGCAGTACTTCAATGTTGGGCAACAAGCACAGATCCCCATTGCCACTGCTGGTGTTGTGTACCCTGGA 1674
|||||||.|||||||||||.||||||||||||||||||||||||||.||.||.||.||.|||||.|||||..|.
Sbjct 998 AAATGCGACAGTACTTCAACGTTGGGCAACAAGCACAGATCCCCATCGCGACGGCCGGAGTTGTATACCCCAGC 1071
Query 1675 GCCATCGCCATGGCTGGGATGCCCTCCCCTCACCTGCCCTCGGAGCACTCAAGCGTGTCTAGCAGCCCAGAGCC 1748
||||||||||||||.||.|||||.|||||||||||||||||.||||||||.||||||||.||||||||.|||||
Sbjct 1072 GCCATCGCCATGGCAGGAATGCCGTCCCCTCACCTGCCCTCCGAGCACTCGAGCGTGTCCAGCAGCCCGGAGCC 1145
Query 1749 TGGGATGCCTGTTATCCAGAGCACTTACGGTGTGAAAGGAGAGGAGCCACATATCAAAGAAGAGATACAGGCCG 1822
.||||||||.||.|||||||||||||||||.|..||.|||||||||||.||.|||||.||||||||.|||||.|
Sbjct 1146 CGGGATGCCCGTGATCCAGAGCACTTACGGCGCCAAGGGAGAGGAGCCCCACATCAAGGAAGAGATCCAGGCTG 1219
Query 1823 AGGACATCAATGGAGAAATTTATGATGAGTACGACGAGGAAGAGGATGATCCAGATGTAGATTATGGGAGTGAC 1896
||||||||||.|||||.|||||.||.||||||||.|||||.|||||.||.||.|||||.|||||||||||||||
Sbjct 1220 AGGACATCAACGGAGAGATTTACGAGGAGTACGATGAGGAGGAGGAGGACCCGGATGTGGATTATGGGAGTGAC 1293
Query 1897 AGTGAAAACCATATTGCAGGACAAGCCAAC 1926
||.||||||||.|||||.||||||||||||
Sbjct 1294 AGCGAAAACCACATTGCGGGACAAGCCAAC 1323
