Nucleotide Global Alignment

Description

Query:
TRCN0000471652
Subject:
XM_006528344.4
Aligned Length:
1116
Identities:
240
Gaps:
840

Alignment

Query    1  ATGCTGCTGCTGAAGAAACACACGGAGGACATCAGCAGCGTCTACGAGATCCGCGAGAGGCTCGGCTCGGGGCC  74
            |||||||||||.||||||||.|||||||||||||||||.|||||.||||||||.||||.|||.|||||      
Sbjct    1  ATGCTGCTGCTCAAGAAACAGACGGAGGACATCAGCAGTGTCTATGAGATCCGGGAGAAGCTGGGCTC------  68

Query   75  CTCCCCGCTCCACTCTCTCTCCCTCCTGCCTCTCCTCTCTTCCCACTTCCTTCCCACCTCCCACCGCCCCGTCT  148
                                                                                      
Sbjct   69  --------------------------------------------------------------------------  68

Query  149  GCGGCAGGGGTGCCTTCTCCGAGGTGGTGCTGGCCCAGGAGCGGGGCTCCGCACACCTCGTGGCCCTCAAGTGC  222
                   ||||||||||||.||||||.|||||||||||||..|||||||.||.||.||.|||||||||||||||
Sbjct   69  -------GGGTGCCTTCTCTGAGGTGATGCTGGCCCAGGAAAGGGGCTCTGCTCATCTTGTGGCCCTCAAGTGC  135

Query  223  ATCCCCAAGAAGGCCCTCCGGGGCAAGGAGGCCCTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATCAGTCA  296
            ||.||||||||.||.||.||||||||||||||||||||||||||.||||||||.||.||.||.||.|||||.||
Sbjct  136  ATTCCCAAGAAAGCACTTCGGGGCAAGGAGGCCCTGGTGGAGAATGAGATCGCGGTACTTCGCAGAATCAGCCA  209

Query  297  CCCCAACATCGTCGCTCTGGAGGATGTCCACGAGAGCCCTTCCCACCTCTACCTGGCCATGGAACTG-------  363
            .||||||||.||.|||||||||||.|||||.|||||.|||||.||.||||||.||||||||||.|||       
Sbjct  210  TCCCAACATTGTGGCTCTGGAGGACGTCCATGAGAGTCCTTCTCATCTCTACTTGGCCATGGAGCTGGTAACAG  283

Query  364  --------------------------------------------------------------------------  363
                                                                                      
Sbjct  284  GTGGTGAACTGTTTGACCGCATCATGGAGCGGGGCTCCTACACAGAGAAGGACGCCAGCCACCTTGTAGGGCAG  357

Query  364  --------------------------------------------------------------------------  363
                                                                                      
Sbjct  358  GTCCTTGGCGCTGTCTCCTACCTTCATAGCCTGGGCATCGTGCACCGGGACCTCAAGCCTGAAAACCTCCTCTA  431

Query  364  --------------------------------------------------------------------------  363
                                                                                      
Sbjct  432  TGCCACACCTTTTGAGGACTCCAAGATCATGGTCTCTGACTTTGGCCTGTCCAAAATACAAGCTGGCAACATGC  505

Query  364  --------------------------------------------------------------------------  363
                                                                                      
Sbjct  506  TAGGCACAGCCTGTGGGACCCCAGGATATGTGGCCCCAGAGCTCCTGGAGCAGAAACCCTACGGGAAGGCCGTA  579

Query  364  --------------------------------------------------------------------------  363
                                                                                      
Sbjct  580  GATGTGTGGGCCCTGGGTGTCATCTCCTACATCCTGCTGTGTGGGTACCCCCCCTTCTATGATGAGAGCGATCC  653

Query  364  --------------------------------------------------------------------------  363
                                                                                      
Sbjct  654  TGAACTCTTCAGCCAGATTCTGAGGGCCAGCTATGAGTTTGACTCCCCCTTTTGGGATGACATCTCAGAATCAG  727

Query  364  --------------------------------------------------------------------------  363
                                                                                      
Sbjct  728  CCAAAGACTTCATTCGCCACCTTCTGGAACGTGATCCCCAGAAGAGGTTCACCTGCCAGCAGGCCCTACAGCAT  801

Query  364  --------------------------------------------------------------------------  363
                                                                                      
Sbjct  802  CTTTGGATCTCTGGGGATGCAGCCTTCGATAGGGACATCCTGGGTTCTGTCAGTGAGCAGATCCAGAAGAATTT  875

Query  364  --------------------------------------------------------------------------  363
                                                                                      
Sbjct  876  TGCCAGGACCCACTGGAAGCGTGCATTCAATGCCACATCATTCCTACGTCACATCCGTAAGCTGGGACAAAGCC  949

Query  364  --------------------------------------------------------------------------  363
                                                                                      
Sbjct  950  CAGAGGGTGAGGAGGCCTCCAGGCAGTGTATGACCCGTCATAGCCACCCAGGCCTTGGGACTAGCCAGTCCCCC  1023

Query  364  ------  363
                  
Sbjct 1024  AAGTGG  1029