Nucleotide Global Alignment
Description
- Query:
- TRCN0000471672
- Subject:
- XM_006506197.2
- Aligned Length:
- 3080
- Identities:
- 1612
- Gaps:
- 1297
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGGTTGCCATGGGAACTGCTAGTGCTGCAATCATTCATGTTGTGCCTTGCAGATGACTACACACTGCATGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCAGTTTTTGTTCAAGAACCAAGTCATGTCATGTTTCCTTTGGATTCTGAGGAGAAAAAAGTGAAACTCAGTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTGAAGTTAAAGGGAATCCAAAACCTCACATCAGGTGGAAGATAAATGGAACAGATGTTGACATTGGTATGGAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTCCGCTACAGTGTTGTTGACGGCAGCTTGTTGATCAATAACCCCAATAAAACCCAAGATGCTGGAACGTACCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTGCATAGCAACAAACTCATTTGGAACAATTGTAAGCAGAGAAGCAAAGCTTCAGTTTGCTTATCTTGAAAACT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTAAGACAAGAACAAGAAGCACTGTGTCAGTCCGTCGAGGTCAGGGAATGGTCCTTCTGTGCGGCCCGCCACCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CATTCTGGAGAGCTGAGCTATGCCTGGATCTTCAATGAATACCCTTCCTATCAGGATAACCGCCGCTTCGTTTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCAAGAGACTGGGAATCTGTATATTGCCAAAGTGGAAAAATCTGATGTTGGTAATTACACCTGTGTAGTTACCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACACTGTGACCAACCACAAGGTCCTGGGACCGCCCACACCACTAATCCTGAGAAATGATGGGGTGATGGGTGAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TATGAGCCCAAAATAGAAGTACAGTTTCCAGAAACCGTCCCGGCTGAGAAAGGAACAACAGTCAAACTGGAATG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTTTGCCTTAGGAAATCCAGTCCCAACTATTCTATGGCGAAGAGCTGATGGCAAGCCAATAGCAAGGAAAGCCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAAGACATAAGTCGAATGGAATTCTGGAAATTCCCAATTTTCAGCAGGAAGATGCCGGTTCATATGAATGTGTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCTGAAAACTCCAGAGGCAAAAACGTAGCCAAGGGACAGTTGACTTTTTATGCTCAACCTAACTGGGTTCAAAT 962
Query 1 ----------------------ATGGAAGAAAATGTCTTTTGGGAATGTAAAGCAAATGGAAGGCCTAAGCCTA 52
||||||||.|.||||||.||||||||||||||||||||.||||||||.||||
Sbjct 963 AATAAATGATATCCACGTGGCCATGGAAGAGAGTGTCTTCTGGGAATGTAAAGCAAATGGGAGGCCTAAACCTA 1036
Query 53 CATACAAGTGGCTAAAAAATGGCGAACCTCTGCTAACTCGGGATAGAATTCAAATTGAGCAAGGAACACTCAAC 126
|.||||..||||||||||||||.||.||.|||.||||.|||||||||||.|||||.||||||||||||||||||
Sbjct 1037 CCTACAGATGGCTAAAAAATGGTGACCCACTGTTAACACGGGATAGAATACAAATCGAGCAAGGAACACTCAAC 1110
Query 127 ATAACAATAGTGAACCTCTCAGATGCTGGCATGTATCAGTGTTTGGCAGAGAATAAACATGGAGTTATCTTTTC 200
||||||||||||||.||||||||||||||||||||.||||||.|||||||.|||||||||||||||||||||||
Sbjct 1111 ATAACAATAGTGAATCTCTCAGATGCTGGCATGTACCAGTGTGTGGCAGAAAATAAACATGGAGTTATCTTTTC 1184
Query 201 CAACGCAGAGCTTAGTGTTATAGCTGTAGGTCCAGATTTTTCAAGAACACTCTTGAAAAGAGTAACTCTTGTCA 274
||.|||.|||||||||||.|||||||.|.|||||||||||||..||||||||||.|||||||||||.|||||||
Sbjct 1185 CAGCGCTGAGCTTAGTGTAATAGCTGAAAGTCCAGATTTTTCCCGAACACTCTTAAAAAGAGTAACACTTGTCA 1258
Query 275 AAGTGGGAGGTGAAGTTGTCATTGAGTGTAAGCCAAAAGCGTCTCCAAAACCTGTTTACACCTGGAAGAAA-GG 347
||||||||||||||||||||||||||||.|||||||||||.||.||||.||||||.||||||||| ||||| ||
Sbjct 1259 AAGTGGGAGGTGAAGTTGTCATTGAGTGCAAGCCAAAAGCATCCCCAAGACCTGTCTACACCTGG-AGAAAGGG 1331
Query 348 AAGGGATATATTAAAAGAAAATGAAAGAATTACCATTTCTGAAGATGGAAACCTCAGAATCATCAACGTTACTA 421
|||.||.|||||||.|||||||||||||||||||||||||||||||||.|||||||||||||||||.||.||||
Sbjct 1332 AAGAGAAATATTAAGAGAAAATGAAAGAATTACCATTTCTGAAGATGGGAACCTCAGAATCATCAATGTGACTA 1405
Query 422 AATCAGACGCTGGGAGTTATACCTGTATAGCCACTAACCATTTTGGAACTGCTAGCAGTACTGGAAACTTGGTA 495
||||.||.|||||.|||||.|||||.||||||||.|||||||||||||||||.|||||||||||.||..||.|.
Sbjct 1406 AATCTGATGCTGGAAGTTACACCTGCATAGCCACGAACCATTTTGGAACTGCCAGCAGTACTGGGAATGTGATT 1479
Query 496 GTGAAAGATCCAACAAGGGTAATGGTACCCCCTTCCAGTATGGATGTCACTGTTGGAGAGAGTATTGTTTTACC 569
||||||||.|||||||.|||.|||||.||.||||||||.||||||||||||||.|||||.||.||||||.|.||
Sbjct 1480 GTGAAAGACCCAACAAAGGTGATGGTTCCTCCTTCCAGCATGGATGTCACTGTAGGAGAAAGCATTGTTCTTCC 1553
Query 570 GTGCCAGGTAACGCATGATCACTCGCTAGACATCGTGTTTACTTGGTCATTTAATGGACACCTGATAGACTTTG 643
.|||||||||||.|||||||||||.||.|||||.||||||||.|||.||||||||||||||.||||||||||||
Sbjct 1554 ATGCCAGGTAACACATGATCACTCCCTGGACATTGTGTTTACGTGGACATTTAATGGACACTTGATAGACTTTG 1627
Query 644 ACAGAGATGGGGACCACTTTGAAAGAGTTGGAGG---GGATTCAGCTGGTGATTTGATGATCCGAAACATCCAA 714
|||..|||||.||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1628 ACAAGGATGGAGACCACTTTGAAAGAGTTGGAGGGCAGGATTCAGCTGGTGATTTGATGATCCGAAACATCCAA 1701
Query 715 CTGAAGCATGCTGGGAAATATGTCTGCATGGTCCAAACAAGTGTGGACAGGCTATCTGCTGCTGCAGACCTGAT 788
|||||||||||||||||.||||||||||||||||||||||||||.||||..||.||||.||||||.||||||||
Sbjct 1702 CTGAAGCATGCTGGGAAGTATGTCTGCATGGTCCAAACAAGTGTAGACAAACTCTCTGTTGCTGCGGACCTGAT 1775
Query 789 TGTAAGAGGTCCTCCAGGTCCCCCAGAGGCTGTGACAATAGACGAAATCACAGATACCACTGCTCAGCTCTCCT 862
|||||||||||||||||||||.||.|||||||||||.|||||.|||||||||||.||||||||||||||.||.|
Sbjct 1776 TGTAAGAGGTCCTCCAGGTCCTCCTGAGGCTGTGACCATAGATGAAATCACAGACACCACTGCTCAGCTTTCTT 1849
Query 863 GGAGACCCGGGCCTGACAATCACAGCCCCATCACCATGTATGTCATTCAAGCCAGGACTCCGTTCTCCGTGGGC 936
|||||||.||.||||||||.|||||||||||||||||||||||.||.|||||.||||||||.||||||||||||
Sbjct 1850 GGAGACCAGGACCTGACAACCACAGCCCCATCACCATGTATGTTATCCAAGCTAGGACTCCATTCTCCGTGGGC 1923
Query 937 TGGCAAGCAGTCAGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGTGGTGGGTTTGAACCC 1010
|||||||||||||.||||||.|||||.|||.|.||.|||||||||||||||||.||.||||||||||||||.||
Sbjct 1924 TGGCAAGCAGTCAATACAGTTCCAGATCTCGTCGACGGGAAGACATTCACAGCAACTGTGGTGGGTTTGAATCC 1997
Query 1011 TTGGGTTGAATATGAATTCCGCACAGTTGCAGCCAACGTGATTGGGATTGGGGAGCCCAGCCGCCCCTCAGAGA 1084
||||||||||||||||||||||||.||||||||.||.||||||||.||||||||.||||||||.||||||||||
Sbjct 1998 TTGGGTTGAATATGAATTCCGCACTGTTGCAGCTAATGTGATTGGCATTGGGGAACCCAGCCGGCCCTCAGAGA 2071
Query 1085 AACGGAGAACAGAAGAAGCTCTCCCCGAAGTCACACCAGCGAATGTCAGTGGTGGCGGAGGCAGCAAATCTGAA 1158
|||||||.||||||||.||||
Sbjct 2072 AACGGAGGACAGAAGAGGCTC----------------------------------------------------- 2092
Query 1159 CTGGTTATAACCTGGGAGACGGTCCCTGAGGAATTACAGAATGGTCGTGGCTTTGGTTATGTGGTGGCCTTCCG 1232
Sbjct 2093 -------------------------------------------------------------------------- 2092
Query 1233 GCCCTACGGTAAAATGATCTGGATGCTGACAGTGCTGGCCTCAGCTGACGCCTCTAGATACGTGTTCAGGAATG 1306
Sbjct 2093 -------------------------------------------------------------------------- 2092
Query 1307 AGAGCGTGCACCCCTTCTCTCCCTTTGAGGTTAAAGTAGGTGTCTTCAACAACAAAGGAGAAGGCCCTTTCAGT 1380
Sbjct 2093 -------------------------------------------------------------------------- 2092
Query 1381 CCCACCACGGTGGTGTATTCTGCAGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTC 1454
||||||||||.|||||||||||||||||||||||.||||||||
Sbjct 2093 -------------------------------AACCCACCAAGCCACCAGCCAGTATCTTTGCCAGGAGTCTTTC 2135
Query 1455 TGCCACAGATATTGAAGTTTTCTGGGCCTCCCC-ACTGGAGAAGAATAGAGGACGAATACAAGGTTATGAGGTT 1527
||||||.|||||.|||||||||||||||||||| |.|||| |||||.||||||||.||.||||||||||||||.
Sbjct 2136 TGCCACGGATATCGAAGTTTTCTGGGCCTCCCCTATTGGA-AAGAACAGAGGACGGATTCAAGGTTATGAGGTA 2208
Query 1528 AAATATTGGAGACATGAAGACAAAGAAGAAAATGCTAGAAAAATACGAACAGTTGGAAATCAGACATCAACAAA 1601
|||||||||||||||||.|||||.|||||||||||||.|||.||||||||||||||||||||||||||.|||||
Sbjct 2209 AAATATTGGAGACATGATGACAAGGAAGAAAATGCTAAAAAGATACGAACAGTTGGAAATCAGACATCCACAAA 2282
Query 1602 AATCACGAACTTAAAAGGCAGTGTGCTGTATCACTTAGCTGTCAAGGCATATAATTCTGCTGGGACAGGCCCCT 1675
||||||.|||||.|||||.||||..||||||||||||.||||||||||.|||||.||.|||||||||||.||||
Sbjct 2283 AATCACCAACTTGAAAGGAAGTGCTCTGTATCACTTATCTGTCAAGGCGTATAACTCAGCTGGGACAGGACCCT 2356
Query 1676 CTAGTGCAACAGTCAATGTGACAACCCGAAAGCCACCACCAAGTCAACCCCCCGGAAACATCATATGGAATTCA 1749
|.|||||||||||||||||.||.|||.||||||||||||||||.||||||||.|||||||||||||||||||||
Sbjct 2357 CCAGTGCAACAGTCAATGTCACGACCAGAAAGCCACCACCAAGCCAACCCCCTGGAAACATCATATGGAATTCA 2430
Query 1750 TCAGACTCCAAAATTATCCTGAATTGGGATCAAGTGAAGGCCCTGGATAATGAGTCGGAAGTAAAAGGATACAA 1823
||.||||||||||||||||||||.||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 2431 TCGGACTCCAAAATTATCCTGAACTGGGATCAAGTGAAGGCCCTGGATAATGAGTCAGAAGTAAAAGGATACAA 2504
Query 1824 AGTCTTGTACAGATGGAACAGACAAAGCAGCACATCTGTCATTGAAACAAATAAAACATCGGTGGAGCTTTCTT 1897
|||||||||||||||||||||.||||||||||||||||||||||||||.||.||.|||||.|||||||||||.|
Sbjct 2505 AGTCTTGTACAGATGGAACAGGCAAAGCAGCACATCTGTCATTGAAACCAACAAGACATCAGTGGAGCTTTCAT 2578
Query 1898 TGCCTTTCGATGAAGATTATATAATAGAAATTAAGCCATTCAGCGACGGAGGAGATGGCAGCAGCAGTGAACAA 1971
|.|||||||||||||||||.||.|||||.||.|||||||||||.||.|||||||||||||||||||||||.|||
Sbjct 2579 TACCTTTCGATGAAGATTACATCATAGAGATCAAGCCATTCAGTGATGGAGGAGATGGCAGCAGCAGTGAGCAA 2652
Query 1972 ATTCGAATTCCAAAGATATCAAATGCCTACGCGAGAGGATCTGGGGCTTCCACTTCGAATGCATGTACGCTGTC 2045
||.|||||.|||||||||||||||.||||.||.||||||||.||||||||.||.||.|||||.|||||||||||
Sbjct 2653 ATCCGAATCCCAAAGATATCAAATTCCTATGCAAGAGGATCGGGGGCTTCTACCTCCAATGCGTGTACGCTGTC 2726
Query 2046 AGCCATCAGTACAATAATGATTTCCCTCACAGCTAGGTCCAGTTTA 2091
||||||||||||||||||||||||.||||||||.|||||.||||||
Sbjct 2727 AGCCATCAGTACAATAATGATTTCTCTCACAGCCAGGTCTAGTTTA 2772
