Nucleotide Global Alignment

Description

Query:
TRCN0000471693
Subject:
XR_376326.1
Aligned Length:
3412
Identities:
1361
Gaps:
1839

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGGCGCCTGCCACCGCCTCCTGGGCGGGAGCTTCCTGTGGCTGTCTCCGCCGCGGCCGCCCGGGGGCCGCGGAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGCTAGGCGGTTCCGGGCTCGAGAAGGCCCGGTTTTGGTTCGGATCCGCCGCGAGGTATCTAGCCTGCCAAGAT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCCAGGGCCAAGACCTCGGAAGGGCCCTAAGACCAGTGGCCAGGGTGCTGAGACTGCCAAGCAGCTGGGGCTTT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TTGTGGAGTTCAACCCTGAGGACATGCTCCTGGGGGTGGATGAGACTGAAGATGATGGAGACCTGGAGGCTGAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TTACTGGCACTCACAGGGGAAACAGCGAGCAGGAGCAGGAAGCCAGCACCCAAGGGGCAGGCTCCACTGCCCAT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GGCCCACATTGAGAAGCTGGCAGCAGACTGTATGCGAGATGTGGAGGAGGATGAAGAAGAGGAAGGGCTGGAGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ACGATGCAGACCTTCTGACAGAGCTGCAGGAGGTCCTGGGTGAGGATGAAGAAGCGGGTCTGCTGGACGGCAGT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GAGGCAGCAAGTCCAGACCTCTGTGAGGAGAAGACTTGGGACAACACTGAACTACCTGTAGAGCAGGCAGCCTG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CCAACAGGCAGTACCTGCTGCAGCTCAGGCTGGAGGGCCTCGGGGGCTGCAGGCTTTGCTGGAGGAACGGATCC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GTAACTACCGGGAGGCCGCAGCCAGTGCCAAGGAGGCTGGTGAAGCTGCCAAAGCCCGGCGCTGTGAGCGAGGC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CTAAAGACTCTGCAGTCCCAGCTTGCCACTGTGAGGAAAGGCGGGAAGATCTGTGAGGATGAGATCCCACCTCC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AGTAGCCTTGGGCAAAAGGCCCCCAGCCCCCCAGGAAAGAGCCATCAAGAACCCTGAGATAGACTCTCCAGGTC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CCTGTGCCATGGAGCCAGGCAACCTTTCCCAGCCCGAGTCCAGCCTCCCTGCCATTGCTCCCTTGCCTGATTCA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GACCCAGACCCACAAGCCCTGCTGTTAGCCCGACAGAGAGAGTACAAGGCGGCTGCTCTCGATGCCAAGCGGGC  1036

Query    1  ----------------------------ATGAGGATTGGGAAGAGATTCGGTGCTGTCCTGGAGGCCCTGGAGA  46
                                        ||||||||.|||||||||||.|||.|||||||.|||||||||||.|
Sbjct 1037  TGGAGATCTAGACCGTGCTCGGGAGCTCATGAGGATCGGGAAGAGATTTGGTACTGTCCTAGAGGCCCTGGAAA  1110

Query   47  AGGGGCAGCCCGTGGATCTGAGTGCCATGCCCCCGGCACCTGAGGATCTGAAG-----CCCCAGCAGGCTTCTC  115
            ||||.|||||.|||||.|||||||.|||||||||.|||||||.||||||||||     ||||  |||||||||.
Sbjct 1111  AGGGTCAGCCTGTGGACCTGAGTGGCATGCCCCCAGCACCTGCGGATCTGAAGGCCCTCCCC--CAGGCTTCTA  1182

Query  116  AGGCTCCCACAGCACCCTCAGTCATTCCCCCAGCCGTGGAGCGAGTGCAGCCAGTGATGGCCCCTGACGTCCCA  189
            ||||..||.|||||.||..||.|.|..|||||||.||.||||.|.|||||||||||||||||.|||||.|||||
Sbjct 1183  AGGCCTCCTCAGCAACCCAAGGCCTGTCCCCAGCAGTAGAGCAAATGCAGCCAGTGATGGCCTCTGACCTCCCA  1256

Query  190  GCAACCCCAGTGGCCCCTACAGAGTC-ACAGACAGTGCTGGATGCCCTGCAGCAGAGGCTGAACAAGTACCGCG  262
            ||.|||||||||||||||.|.|||.| ||| ||||||||||||||..|.|||||.||||||||||||||.||.|
Sbjct 1257  GCCACCCCAGTGGCCCCTGCGGAGCCAACA-ACAGTGCTGGATGCTTTACAGCAAAGGCTGAACAAGTATCGTG  1329

Query  263  AGGCGGGCATCCAGGCCCGGAGTGG----TGGGGACGAGCGCAAGGCTCGGATGCATGAGCGCATTGCCAAGCA  332
            ||||.||||||||||||||    ||    ||||||.|||||||||||..|||||||.||.||||||||||||||
Sbjct 1330  AGGCAGGCATCCAGGCCCG----GGCCAATGGGGATGAGCGCAAGGCCAGGATGCACGATCGCATTGCCAAGCA  1399

Query  333  ATATCAAGATGCTATTCGAGCACACCGAGCAGGACGGAAAGTCAACTTTGCTGAATTGCCTGTTCCTCCAGGAT  406
            ||||||.||||||.|||||||.||.|..|||||||.||||||..|||||||.||.||.||||||||||||||||
Sbjct 1400  ATATCAGGATGCTGTTCGAGCTCATCAGGCAGGACAGAAAGTTGACTTTGCCGAGTTACCTGTTCCTCCAGGAT  1473

Query  407  TTCCCCCCATCCCTGGCCTGGAGTCCACTATGGGTGTTGAGGAGGACGCAGTGGCAGCGACATTGGCAGCTGCA  480
            ||||.||||||||||||||||||.|||..|..|||..||||.||||..||||||||||.||.||.|||.||||.
Sbjct 1474  TTCCTCCCATCCCTGGCCTGGAGCCCAGGAAAGGTAGTGAGCAGGATTCAGTGGCAGCAACTTTAGCAACTGCC  1547

Query  481  GAGAAACTGGCCTCTGCAGAGGATTCAGCCCCGGCTGATAAAGACGAGGACGAGGGTGAGCCCCCAGCACAGGC  554
            .|.||||||||||   ||||.|||.||||||.||..|||   |||||.||.|||.||||..|.|||||||||||
Sbjct 1548  CAAAAACTGGCCT---CAGAAGATGCAGCCCTGGTAGAT---GACGACGAGGAGAGTGACACTCCAGCACAGGC  1615

Query  555  CCCAGTGGCCAAGAAACCTGCACGGCCCACAGTCCCTTCATCCCAGCGCCTGCCTGAGCCCAGGGCCTCAAGTT  628
            ||||.||||||||||.||.||.|.|.|....|||.||.|||||||.|..|||.|||||||||.|||.|||||||
Sbjct 1616  CCCATTGGCCAAGAAGCCAGCGCAGACTCTGGTCTCTCCATCCCATCTTCTGACTGAGCCCAAGGCTTCAAGTT  1689

Query  629  CTAAGGAGTCACCGAGTCCATCTGTGCGGGAGCAGCTGGCACTGCTGGAGGCACGGAAACTGCAGTATCAGCGG  702
            ||||||||||||.||||||||||||.|||||||||.||.|||||||||||||.|||||||||||.||.|||||.
Sbjct 1690  CTAAGGAGTCACTGAGTCCATCTGTTCGGGAGCAGGTGACACTGCTGGAGGCTCGGAAACTGCAATACCAGCGA  1763

Query  703  GCAGCCCTGCAGGCCAAGCGCAGCCAGGACCTGGAGCAGGCCAAAGCCTATCTGCGGGTAGCCAAATGGCTTGA  776
            |||||.|||||.|||||||||||.|||||.||.||||||||||||.||.|..|.||.|||||.|||.|.|||||
Sbjct 1764  GCAGCTCTGCAAGCCAAGCGCAGGCAGGATCTTGAGCAGGCCAAATCCCACTTACGAGTAGCTAAAAGTCTTGA  1837

Query  777  GGCTCAGATCATCCAGGCCCGATCTGG-CAGACCTGTTGATCTGTCCA--------------------------  823
            ||||||||||||||||||||||.|||| || |||..|||||||.||||                          
Sbjct 1838  GGCTCAGATCATCCAGGCCCGAGCTGGTCA-ACCCATTGATCTCTCCAAGGTAACATGGCAGGGCCAGTCTAGT  1910

Query  824  -----------------------------------------------------------------AGGTGCCTT  832
                                                                             |||||||||
Sbjct 1911  AGAAACAGTGCCAGGGATAGAATGGGAGGCAGTGAGTGTCATTGGAGGGGCCTTATGATCTGGGCAGGTGCCTT  1984

Query  833  CGCCCTTGACGGATGAGGAGGGTGACTTCATCCTCATCCACCATGAGGACCTGCGACTCTCCCAGAAGGCGGAG  906
            |.||.|||||.|||||.|||||.||||||||||||||.|||||||||||.||||||||||||||||||||.|||
Sbjct 1985  CACCGTTGACAGATGAAGAGGGGGACTTCATCCTCATTCACCATGAGGATCTGCGACTCTCCCAGAAGGCTGAG  2058

Query  907  GAGGTGTATGCCCAGCTGCAAAAAATGCTTCTGGAGCAACAAGAGAAGTGCCTGCTGTTCTCCAAGCAGTTCAT  980
            |||||||||||||||||.||.||||||||.|.||||||.||||.||||||||||||.|||||||||||||.|||
Sbjct 2059  GAGGTGTATGCCCAGCTACAGAAAATGCTCCAGGAGCAGCAAGCGAAGTGCCTGCTATTCTCCAAGCAGTACAT  2132

Query  981  GCACCAGGGCAACGTGGCTGAGACCACCCGATTTGAGAAGCTTGCTCAGGACCGCAAGAAACAGCTGGAGATCC  1054
            |||||||||.||.||||||||||||||.||.|||||||.||||||..|||||||.|||||||||||.|||||||
Sbjct 2133  GCACCAGGGAAATGTGGCTGAGACCACTCGGTTTGAGAGGCTTGCGGAGGACCGAAAGAAACAGCTTGAGATCC  2206

Query 1055  TGCAGCTGGCCCAGGCTCAGGGCCTCGACCCTCCCACCCACCACTTTGAGTTGAAGACATTCCAGACTGTGAGG  1128
            |||||||.|||||.||.||||||||.||||||||.|..||.|||||||||.|||||||||||||||||||||||
Sbjct 2207  TGCAGCTAGCCCAAGCCCAGGGCCTTGACCCTCCTAGTCATCACTTTGAGCTGAAGACATTCCAGACTGTGAGG  2280

Query 1129  ATCTTCTCAGAACTCAACAGCACAGAAATGCATCTGATCATTGTCCGGGGAATGAACCTCCCAGCCCCTCCAGG  1202
            |||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||||||||||||.|||||
Sbjct 2281  ATCTTCTCAGAACTCAACAGCACAGAAATGCATCTGATCATCGTGCGGGGAATGAACCTCCCAGCCCCGCCAGG  2354

Query 1203  GGTGACTCCCGATGACCTGGATGCTTTTGTGCGGTTTGAGTTTCACTACCCTAACTCGGACCAGGCTCAAAAAA  1276
            .||||||||.||||||.|||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 2355  AGTGACTCCGGATGACTTGGATGCTTTTGTACGGTTTGAGTTTCACTACCCTAACTCGGACCAGGCTCAAAAAA  2428

Query 1277  GCAAAACAGCTGTGGTGAAGAACACAAACTCTCCAGAATTTGATCAACTCTTCAAACTAAACATCAACCGAAAC  1350
            ||||||||||||||||.||.||.||.||.||||||||||||||.|||.|.|||||.|||||||||||.||||||
Sbjct 2429  GCAAAACAGCTGTGGTAAAAAATACCAATTCTCCAGAATTTGAACAAGTTTTCAAGCTAAACATCAATCGAAAC  2502

Query 1351  CACCGGGGCTTCAAGAGGGTGATCCAGAGCAAAGGCATCAAGTTTGAGATCTTCCACAAAGGGTCCTTCTTCAG  1424
            |||||.|||||.|.|||.|||||||||||||||||.|||||.||||||||||||||||||||.|||||.||.||
Sbjct 2503  CACCGAGGCTTTAGGAGAGTGATCCAGAGCAAAGGAATCAAATTTGAGATCTTCCACAAAGGATCCTTTTTTAG  2576

Query 1425  AAGCGACAAGCTGGTTGGCACAGCACACCTGAAACTGGAGCGGCTGGAGAATGAGTGTGAGATCAGAGAAATTG  1498
            |||.||||||||||||||||||||||||.|||||.||||..||||||||||.|||||||||||||||||.||..
Sbjct 2577  AAGTGACAAGCTGGTTGGCACAGCACACTTGAAATTGGAAAGGCTGGAGAAGGAGTGTGAGATCAGAGAGATCA  2650

Query 1499  TGGAGGTCCTGGATGGAAGGAAGCCCACCGGGGGGAAGCTGGAGGTGAAGCCGATG--------GCC----AGC  1560
            |||||||..|||||||.||.||||||||.|||||||||||||||||||||..||.|        |||    |||
Sbjct 2651  TGGAGGTTTTGGATGGCAGAAAGCCCACTGGGGGGAAGCTGGAGGTGAAGGTGAGGCTTCGGGAGCCTCTGAGC  2724

Query 1561  A-CCAGGAGATGAGTCAGGCCGCGACTGTGCAGGAGA-------------------------------------  1596
            | ||||||..||   |||.|.|..|||      ||||                                     
Sbjct 2725  AGCCAGGACGTG---CAGACGGTCACT------GAGAACTGGCTGGTCCTGGAGCCTCGGGGCCTGTGAAGAGG  2789

Query 1597  --------------------------------------------------------------------------  1596
                                                                                      
Sbjct 2790  TGGACATCCTTGGTAACAGCTCACTGACCCAGCTGTGCCGGCTCAAGAGCCGTTGTACATCAGAGATGCTGCTA  2863

Query 1597  --------------------------------------------------------------------------  1596
                                                                                      
Sbjct 2864  CACACGCACCAAAGACCTGATAACTAACAGTGGCCTGGGCTTTCCTCCTGCTGCCTCTCCTGGACCTTCGTGGA  2937

Query 1597  --------------------------------------------------------------------------  1596
                                                                                      
Sbjct 2938  AGCAGGCCTCCCACCCTCCCTGTGGGCGAAGACAAGGATACCCCACTGCTCTGTGCCACAGAGTCCCGTAACCG  3011

Query 1597  --------------------------------------------------------------------------  1596
                                                                                      
Sbjct 3012  CTGCATAGTAATTGCGTACCGCTTAACCCAGCCCCCATTTGCACCATTTCTGGATGTGCCTTTCAAAGATGTAA  3085

Query 1597  --------------------------------------------------------------------------  1596
                                                                                      
Sbjct 3086  CTGTAGGGATGGGAGAACTCGAGGGTGATCGGAACATCCCGTGTGGGGAGGGACAGGATTCCGTGACTCCAGCT  3159

Query 1597  --------------------------------------------------------------------------  1596
                                                                                      
Sbjct 3160  GGCCAGCGGCAGACTGTCCCGCTCAGCTGTTTTCCCTCTGCCTGTGCCTTTGTTCCTGACAGCTGCTGCACTAG  3233

Query 1597  --------------------------------------------------------------------------  1596
                                                                                      
Sbjct 3234  CCTTTCTGCTTCCCAGAGGACTCGGGAACAGGAACGTTACTTTGGTACTATTGGTGGGAAGTAAGGGAAGGTTC  3307

Query 1597  --------------------------------------------------------------------------  1596
                                                                                      
Sbjct 3308  TCTTTGGTTTGGTCCATGTACCTAAGGTGAAAGACTGTTAATTGGGGAGAAAAAAAGGAAAAAAGAAAAAGAAA  3381

Query 1597  --------  1596
                    
Sbjct 3382  AACTATCA  3389

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