Nucleotide Global Alignment

Description

Query:
TRCN0000471743
Subject:
XR_002957458.1
Aligned Length:
3178
Identities:
566
Gaps:
2612

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTGCGCGCTCCGCTCGGCAGCCTGTGGGACGCGACCGCGGCGCTAGTCTCGTTCCTTTGTGCTGCGGCGGCGGC  74

Query    1  ---------------------------------------------------------------ATGTCGGCGGC  11
                                                                           |||||||||||
Sbjct   75  TTCTCGAGTCCTCCCCGACGCGTCCTCTAGGCCAGCGAGCCCCGCGCTCTCCGGTGACGGACCATGTCGGCGGC  148

Query   12  GGGAGCGGGCGCGGGCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCTCGCTCCGTTTCCCGCTGCACCGCG  85
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GGGAGCGGGCGCGGGCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCTCGCTCCGTTTCCCGCTGCACCGCG  222

Query   86  CCTGCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGCTGCAGCAGACACCCCACGCCCACCTGGCCTCTGAG  159
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CCTGCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGCTGCAGCAGACACCCCACGCCCACCTGGCCTCTGAG  296

Query  160  GACTCCTTCTATGGCTGGACGCCCGTGCACTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAGTGCAGTTGGT  233
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GACTCCTTCTATGGCTGGACGCCCGTGCACTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAGTGCAGTTGGT  370

Query  234  GAGAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGG  307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GAGAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGG  444

Query  308  GACATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATTAACAAACCGGATTGTGAGGGTGAAACT  381
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GACATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATTAACAAACCGGATTGTGAGGGTGAAACT  518

Query  382  CCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGA  455
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGA  592

Query  456  GTTTATTTCACAGAGCAGTGTACATTCTTGTCTTCCAGGGGAACTTCAACATGGAGTTACTTTTGATCCCTCAG  529
                                                                                      
Sbjct  593  --------------------------------------------------------------------------  592

Query  530  TTTTAATTCAGTGTCTAAAGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTT  603
                                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  --------------------CCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTT  646

Query  604  CCAAGAGTGTGCCCAGTTTCTCTTGAACCTCCAGAATTGTCATCTGAACCATTTCTA-----------------  660
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 
Sbjct  647  CCAAGAGTGTGCCCAGTTTCTCTTGAACCTCCAGAATTGTCATCTGAACCATTTCTATAACAATGGCATCTTAA  720

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct  721  ATGGGGGTCATCAGAATGTATTTCCTAATCATATTAGTGTGGGAACAAATCGAAAGAGATGCTTGGAAGACTCA  794

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct  795  GAAGACTTTGGAGTAAAGAAAGCTAGAACTGAAGCTCAAAGCTTGGATTCTGCCGTGCCACTCACGAATGGCGA  868

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct  869  CACAGAAGACGATGCTGACAAAATGCACGTTGATAGGGAGTTTGCTGTTGTAACAGGTGGGAGTGGACAGTTTC  942

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct  943  CTGTTAGCTGCAACAACAATCCAATGGTTGAAGACACCAAACAGCAGGAGAGTGGTTCTGTTGGACCAAAAGAA  1016

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1017  ATAGAAATATATACTGTGTCAGCAATGCAGACCCCCTGTCGTTGCAGGAATCAGTATGCATATTATTTCTAACA  1090

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1091  TAAGTTTTTCTCAGATGTTTTGCACTTTGTTGTCCAGTGTCTTTTTAAAAATGTTATACTATAATTTGCATATC  1164

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1165  TTGGGCAAGTTTGTAGATACAAGAAGTGTTTTGGGTATATTCTGTGGACATGAAAAATGTAAGTGCAATCTTTA  1238

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1239  TTCTGATTTGAAGCTATTGCTTAATGTGCCTTGCTTATTTTTAATGAGGTTTGCATTTTTAATTTTCTGACATA  1312

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1313  TGGCCTTTGGGTGAATATACCGAACATGCTACAGTTAATATTTTCAAACCAATATACCACAAAGAGGACGACTA  1386

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1387  GCAGTAAACACTGAGAAACTAGTAAATGTGGTTCTGACTCAGCCCAGTCACTCCAGCATGGAATCTTTTACCCA  1460

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1461  GGACTTGGTTGCTCTGGTTTCTGTGGTCTTCATTCTGAGTCTGTTAAAATGATATGAAAAACAGTAGCTCCGTA  1534

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1535  TCGAATACATTGACAAATGGATGTGTCATCAATGGACATTTGGACTTCCCCTCCACGACCCCGCTCAGTGGGAT  1608

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1609  GGAAAGCAGGAATGGCCAGTGCTTGACAGGAACTAACGGAATTAGCAGTGGATTAGCCCCAGGACAGCCGTTTC  1682

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1683  CGAGTAGCCAGGGTTCTCTCTGCATTAGTGGGACTGAGGAGCCAGAGAAGACCCTGAGAGCTAACCCTGAGTTG  1756

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1757  TGCGGTTCTCTGCACCTGAACGGGAGTCCAAGTAGCTGCATAGCCAGTAGGCCTTCCTGGGTGGAAGACATTGG  1830

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1831  GGATAACCTGTACTATGGACACTACCACGGGTTTGGGGACACTGCTGAAAGCATCCCAGAACTGAACAGTGTGG  1904

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1905  TCGAGCATTCCAAGTCCGTGAAGGTGCAGGAGCGGTACGACAGTGCCGTGCTGGGCACCATGCACCTGCACCAC  1978

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1979  GGCTCCTAGAGACGCTGACCTGGCTCTCGGAAACGCAGGAGTCCTTCCTGGTAGCCAGCTCAGAATACCCATGT  2052

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2053  AGCAGCAACTTGAACGAATGTCACAACTTGTACGTTTTTTATATACTTCAACTTTCTGAAAAAGTAAACTTCGA  2126

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2127  CAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGT  2200

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2201  CCTTTTTATAAGGTGCACTTTTGGAGTTTTTCTGATGCCAATCTCAACATTGTCTTTTTAATACTGTCACCAGA  2274

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2275  TATTGCCATTTTTCTTTTTGTTAAAAGATTATATGATCAAGATAAATTGGGGTGGTAAATCAGGTGCCTGGTAA  2348

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2349  TTTATCTCTTTGCACATGGGCATCATTTTAAAAAGCTTGCTTCCACTCTTTTCTGTAGAATTTGACGGAACACA  2422

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2423  GCTATTTCCCTATGCAAGGTACAGCCTTACAAAGATTTCTGCAGTGATTTGTGTGAAGAAGAGAACGTTTGTCT  2496

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2497  TTTTCAATGAAGCTTTGCAGATCACCATGTGGTTGAAGGTTTTAGTTGTGGACACAGTGGTCCCTCCTTAATGA  2570

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2571  TGAAGATCACTGCCTTGGGCTTCATGGAAAACAGGCCCAGCCTGGGGCTGCGTTTGGATTTATTGTTTTTATTC  2644

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2645  CACACTTCCTACTTGGTCTCTGGAAGTTTTACCACATGTAACAGATTCCTTTATATGTAGTGGAAATCACTATT  2718

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2719  TGTAGAAACTGTCAGGTCAAAATATTTAACTGACTGTTGACATGTATTTTCTTTTTTCCTTGTTTTTGTTTTTT  2792

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2793  GGGGTTTTCTGCTTTAAGATATATACCACTATGTATATCCAGTTAACTGAGAGAATTTTGACTCTCTTAATAAA  2866

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2867  ACTGCATTAAGTTTTTGATTTTGTAGAAATTAGCTTTTGTCTAGGCAACTAGTGGTTATACTCTGCAAATATTG  2940

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2941  TAATGAATTTTTACTTTTTTGATTTTTGTAATAAAAATTGGTGCAGATAAAATGTCAAATGAACAAACCAGTGT  3014

Query  661  ----------------------------------------------------------------------  660
                                                                                  
Sbjct 3015  TCTAAGAGTGTTACTAACATTTTGTTCTAAAACTGTCCTTCACAAATTGAATAAAAAACTCTCACACTCA  3084

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