Nucleotide Global Alignment

Description

Query:
TRCN0000471743
Subject:
XR_002957460.1
Aligned Length:
3581
Identities:
660
Gaps:
2921

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTGCGCGCTCCGCTCGGCAGCCTGTGGGACGCGACCGCGGCGCTAGTCTCGTTCCTTTGTGCTGCGGCGGCGGC  74

Query    1  ---------------------------------------------------------------ATGTCGGCGGC  11
                                                                           |||||||||||
Sbjct   75  TTCTCGAGTCCTCCCCGACGCGTCCTCTAGGCCAGCGAGCCCCGCGCTCTCCGGTGACGGACCATGTCGGCGGC  148

Query   12  GGGAGCGGGCGCGGGCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCTCGCTCCGTTTCCCGCTGCACCGCG  85
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GGGAGCGGGCGCGGGCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCTCGCTCCGTTTCCCGCTGCACCGCG  222

Query   86  CCTGCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGCTGCAGCAGACACCCCACGCCCACCTGGCCTCTGAG  159
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CCTGCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGCTGCAGCAGACACCCCACGCCCACCTGGCCTCTGAG  296

Query  160  GACTCCTTCTATGGCTGGACGCCCGTGCACTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAGTGCAGTTGGT  233
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GACTCCTTCTATGGCTGGACGCCCGTGCACTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAGTGCAGTTGGT  370

Query  234  GAGAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGG  307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GAGAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGG  444

Query  308  GACATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATTAACAAACCGGATTGTGAGGGTGAAACT  381
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GACATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATTAACAAACCGGATTGTGAGGGTGAAACT  518

Query  382  CCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGA  455
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGA  592

Query  456  GTTTATTTCACAGAGCAGTGTACATTCTTGTCTTCCAGGGGAACTTCAACATGGAGTTACTTTTGATCCCTCAG  529
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GTTTATTTCACAGAGCAGTGTACATTCTTGTCTTCCAGGGGAACTTCAACATGGAGTTACTTTTGATCCCTCAG  666

Query  530  TTTTAATTCAGTGTCTAA--------------------------------------------------------  547
            ||||||||||||||||||                                                        
Sbjct  667  TTTTAATTCAGTGTCTAAAGGTTTACAAGTTCAACTTACTCTATTTTATTCAGCTCTTTCACTTACTCTGCCAT  740

Query  548  --------------------------------------------------------------------------  547
                                                                                      
Sbjct  741  CACTTCCTACTTGAATCTGAGTTTTAGCTACTGTAGAGGTCTCAGACCTTTCCTTTTTAGTACTATTAGCCAGG  814

Query  548  --------------------------------------------------------------------------  547
                                                                                      
Sbjct  815  TAAAACTTTGGTTCTTGTGAGTGGTAGGGATGAGTTTTTAGGACAGTATTCAAAGCCTTTTTAAAGGAACCAAC  888

Query  548  --------------------------------------------------------------------------  547
                                                                                      
Sbjct  889  TACTCAAATGCTCTACAATGCCAAAAATACAATACTCCTGCAGGTTTTCCCAAGCAAGGCCAAAACAATCAAAA  962

Query  548  --------------------------------------------------------------------------  547
                                                                                      
Sbjct  963  TCTGACAGAAAAACACAGCTGTTCAGCTCTGGAATCTGATGATAGGCTACTTTTTAATGTCAGGACATCCTTCT  1036

Query  548  --------------------------------------------------------------------------  547
                                                                                      
Sbjct 1037  AAACTTCCACTTACAGTGTCACATGTAAGCATGAAGGCTGGCTCGTTGGTGAGCCATTGCTTTGTTTTTAGGAA  1110

Query  548  --------------------------------------------------------------------------  547
                                                                                      
Sbjct 1111  GACAGTTATGAATGCCATGGACAATCTCAGTACATGTTGTTTGTTATGATTTTATTCACGCTAAAGGAATGGGT  1184

Query  548  --------------------------------------------------------------------------  547
                                                                                      
Sbjct 1185  ATTAAAATTAAGTGCATATAATATAGAATTCAGTTTCAAGTCTGAAGTTAGCGTAAATTTAGATTCTTCAGACT  1258

Query  548  --------------------------------------------------------------------------  547
                                                                                      
Sbjct 1259  AACATAAAACATGATTTTGAGAAGTTAAATAGGAAGATGCCTTTTTTAGAAGTTTAGCATATTTAGTTTATCTC  1332

Query  548  --------------------------------------------------------------------------  547
                                                                                      
Sbjct 1333  CCAAATCTTGCTTAGAAATCAAATGTATATAAGAGAAGTTAGTTACAGAGCTAGATTGATTAACTACTTCTTTA  1406

Query  548  --------------------------------------------------------------------------  547
                                                                                      
Sbjct 1407  ATGAAGATTTGCTATGAATTTGTTTACTCTTTCATACCACCTTCAGATAGCTAGTCAGTTCAGCAGGAGCAGAG  1480

Query  548  -------------------------------------------------AGCCTGAGAAATGCCAGTGGCCTGA  572
                                                             |||||||||||||||||||||||||
Sbjct 1481  ACCAGGTTAGCACGCGGATGGGGTGTAATTCAGTGTTTTTGTGTTGTACAGCCTGAGAAATGCCAGTGGCCTGA  1554

Query  573  CAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTTTCTCTTGAACCTCCAGAATTGTCAT  646
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  CAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTTTCTCTTGAACCTCCAGAATTGTCAT  1628

Query  647  CTGAACCATTTCTA------------------------------------------------------------  660
            ||||||||||||||                                                            
Sbjct 1629  CTGAACCATTTCTATAACAATGGCATCTTAAATGGGGGTCATCAGAATGTATTTCCTAATCATATTAGTGTGGG  1702

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1703  AACAAATCGAAAGAGATGCTTGGAAGACTCAGAAGACTTTGGAGTAAAGAAAGCTAGAACTGAAGCTCAAAGCT  1776

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1777  TGGATTCTGCCGTGCCACTCACGAATGGCGACACAGAAGACGATGCTGACAAAATGCACGTTGATAGGGAGTTT  1850

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1851  GCTGTTGTAACAGGTGGGAGTGGACAGTTTCCTGTTAGCTGCAACAACAATCCAATGGTTGAAGACACCAAACA  1924

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1925  GCAGGAGAGTGGTTCTGTTGGACCAAAAGAAATAGAAATATATACTGTGTCAGCAATGCAGACCCCCTGTCGTT  1998

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1999  GCAGGAATCAATATGAAAAACAGTAGCTCCGTATCGAATACATTGACAAATGGATGTGTCATCAATGGACATTT  2072

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2073  GGACTTCCCCTCCACGACCCCGCTCAGTGGGATGGAAAGCAGGAATGGCCAGTGCTTGACAGGAACTAACGGAA  2146

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2147  TTAGCAGTGGATTAGCCCCAGGACAGCCGTTTCCGAGTAGCCAGGGTTCTCTCTGCATTAGTGGGACTGAGGAG  2220

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2221  CCAGAGAAGACCCTGAGAGCTAACCCTGAGTTGTGCGGTTCTCTGCACCTGAACGGGAGTCCAAGTAGCTGCAT  2294

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2295  AGCCAGTAGGCCTTCCTGGGTGGAAGACATTGGGGATAACCTGTACTATGGACACTACCACGGGTTTGGGGACA  2368

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2369  CTGCTGAAAGCATCCCAGAACTGAACAGTGTGGTCGAGCATTCCAAGTCCGTGAAGGTGCAGGAGCGGTACGAC  2442

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2443  AGTGCCGTGCTGGGCACCATGCACCTGCACCACGGCTCCTAGAGACGCTGACCTGGCTCTCGGAAACGCAGGAG  2516

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2517  TCCTTCCTGGTAGCCAGCTCAGAATACCCATGTAGCAGCAACTTGAACGAATGTCACAACTTGTACGTTTTTTA  2590

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2591  TATACTTCAACTTTCTGAAAAAGTAAACTTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTT  2664

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2665  ACTAAGTGCATAGATGTTTCTACAGTGAGGTGTCCTTTTTATAAGGTGCACTTTTGGAGTTTTTCTGATGCCAA  2738

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2739  TCTCAACATTGTCTTTTTAATACTGTCACCAGATATTGCCATTTTTCTTTTTGTTAAAAGATTATATGATCAAG  2812

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2813  ATAAATTGGGGTGGTAAATCAGGTGCCTGGTAATTTATCTCTTTGCACATGGGCATCATTTTAAAAAGCTTGCT  2886

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2887  TCCACTCTTTTCTGTAGAATTTGACGGAACACAGCTATTTCCCTATGCAAGGTACAGCCTTACAAAGATTTCTG  2960

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2961  CAGTGATTTGTGTGAAGAAGAGAACGTTTGTCTTTTTCAATGAAGCTTTGCAGATCACCATGTGGTTGAAGGTT  3034

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 3035  TTAGTTGTGGACACAGTGGTCCCTCCTTAATGATGAAGATCACTGCCTTGGGCTTCATGGAAAACAGGCCCAGC  3108

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 3109  CTGGGGCTGCGTTTGGATTTATTGTTTTTATTCCACACTTCCTACTTGGTCTCTGGAAGTTTTACCACATGTAA  3182

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 3183  CAGATTCCTTTATATGTAGTGGAAATCACTATTTGTAGAAACTGTCAGGTCAAAATATTTAACTGACTGTTGAC  3256

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 3257  ATGTATTTTCTTTTTTCCTTGTTTTTGTTTTTTGGGGTTTTCTGCTTTAAGATATATACCACTATGTATATCCA  3330

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 3331  GTTAACTGAGAGAATTTTGACTCTCTTAATAAAACTGCATTAAGTTTTTGATTTTGTAGAAATTAGCTTTTGTC  3404

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 3405  TAGGCAACTAGTGGTTATACTCTGCAAATATTGTAATGAATTTTTACTTTTTTGATTTTTGTAATAAAAATTGG  3478

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 3479  TGCAGATAAAATGTCAAATGAACAAACCAGTGTTCTAAGAGTGTTACTAACATTTTGTTCTAAAACTGTCCTTC  3552

Query  661  -----------------------------  660
                                         
Sbjct 3553  ACAAATTGAATAAAAAACTCTCACACTCA  3581

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