Nucleotide Global Alignment

Description

Query:
TRCN0000471743
Subject:
XR_002957462.1
Aligned Length:
3257
Identities:
632
Gaps:
2605

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTGCGCGCTCCGCTCGGCAGCCTGTGGGACGCGACCGCGGCGCTAGTCTCGTTCCTTTGTGCTGCGGCGGCGGC  74

Query    1  ---------------------------------------------------------------ATGTCGGCGGC  11
                                                                           |||||||||||
Sbjct   75  TTCTCGAGTCCTCCCCGACGCGTCCTCTAGGCCAGCGAGCCCCGCGCTCTCCGGTGACGGACCATGTCGGCGGC  148

Query   12  GGGAGCGGGCGCGGGCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCTCGCTCCGTTTCCCGCTGCACCGCG  85
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GGGAGCGGGCGCGGGCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCTCGCTCCGTTTCCCGCTGCACCGCG  222

Query   86  CCTGCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGCTGCAGCAGACACCCCACGCCCACCTGGCCTCTGAG  159
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CCTGCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGCTGCAGCAGACACCCCACGCCCACCTGGCCTCTGAG  296

Query  160  GACTCCTTCTATGGCTGGACGCCCGTGCACTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAGTGCAGTTGGT  233
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GACTCCTTCTATGGCTGGACGCCCGTGCACTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAGTGCAGTTGGT  370

Query  234  GAGAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGG  307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GAGAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGG  444

Query  308  GACATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATTAACAAACCGGATTGTGAGGGTGAAACT  381
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GACATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATTAACAAACCGGATTGTGAGGGTGAAACT  518

Query  382  CCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGA  455
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGA  592

Query  456  GT--TTATTTCACAGAGCAGTGTAC---ATTCTT----GTCTTCC-----AGGGGAA--CTTCAACATGGAGTT  513
            .|  .||.|||     |.|.|| ||   |||.||    ||..|||     |||||.|  .|||  |||..||..
Sbjct  593  CTACGTAATTC-----GAATTG-ACTTGATTTTTTCAAGTAATCCTAGAAAGGGGGAGCATTC--CATATAGAA  658

Query  514  ACTTTTGA----------------TC--------CCT--CAGTT------TTAA---TTCAGTGTC--------  544
            |||..|||                ||        |||  |||||      ||.|   ||||||.||        
Sbjct  659  ACTGCTGAAACTGCCACAGGTGCTTCTCCGAAAACCTTACAGTTGTGGCATTGAATGTTCAGTATCGCTTCCTT  732

Query  545  --------------------TAAAGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAG  598
                                |..|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  733  TCTGCACACGAGGCATACTGTTGAGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAG  806

Query  599  GGTTTCCAAGAGTGTGCCCAGTTTCTCTTGAACCTCCAGAATTGTCATCTGAACCATTTCTA------------  660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            
Sbjct  807  GGTTTCCAAGAGTGTGCCCAGTTTCTCTTGAACCTCCAGAATTGTCATCTGAACCATTTCTATAACAATGGCAT  880

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct  881  CTTAAATGGGGGTCATCAGAATGTATTTCCTAATCATATTAGTGTGGGAACAAATCGAAAGAGATGCTTGGAAG  954

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct  955  ACTCAGAAGACTTTGGAGTAAAGAAAGCTAGAACTGAAGCTCAAAGCTTGGATTCTGCCGTGCCACTCACGAAT  1028

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1029  GGCGACACAGAAGACGATGCTGACAAAATGCACGTTGATAGGGAGTTTGCTGTTGTAACAGGTGGGAGTGGACA  1102

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1103  GTTTCCTGTTAGCTGCAACAACAATCCAATGGTTGAAGACACCAAACAGCAGGAGAGTGGTTCTGTTGGACCAA  1176

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1177  AAGAAATAGAAATATATACTGTGTCAGCAATGCAGACCCCCTGTCGTTGCAGGAATCAGTATGCATATTATTTC  1250

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1251  TAACATAAGTTTTTCTCAGATGTTTTGCACTTTGTTGTCCAGTGTCTTTTTAAAAATGTTATACTATAATTTGC  1324

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1325  ATATCTTGGGCAAGTTTGTAGATACAAGAAGTGTTTTGGGTATATTCTGTGGACATGAAAAATGTAAGTGCAAT  1398

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1399  CTTTATTCTGATTTGAAGCTATTGCTTAATGTGCCTTGCTTATTTTTAATGAGGTTTGCATTTTTAATTTTCTG  1472

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1473  ACATATGGCCTTTGGGTGAATATACCGAACATGCTACAGTTAATATTTTCAAACCAATATACCACAAAGAGGAC  1546

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1547  GACTAGCAGTAAACACTGAGAAACTAGTAAATGTGGTTCTGACTCAGCCCAGTCACTCCAGCATGGAATCTTTT  1620

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1621  ACCCAGGACTTGGTTGCTCTGGTTTCTGTGGTCTTCATTCTGAGTCTGTTAAAATGATATGAAAAACAGTAGCT  1694

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1695  CCGTATCGAATACATTGACAAATGGATGTGTCATCAATGGACATTTGGACTTCCCCTCCACGACCCCGCTCAGT  1768

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1769  GGGATGGAAAGCAGGAATGGCCAGTGCTTGACAGGAACTAACGGAATTAGCAGTGGATTAGCCCCAGGACAGCC  1842

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1843  GTTTCCGAGTAGCCAGGGTTCTCTCTGCATTAGTGGGACTGAGGAGCCAGAGAAGACCCTGAGAGCTAACCCTG  1916

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1917  AGTTGTGCGGTTCTCTGCACCTGAACGGGAGTCCAAGTAGCTGCATAGCCAGTAGGCCTTCCTGGGTGGAAGAC  1990

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1991  ATTGGGGATAACCTGTACTATGGACACTACCACGGGTTTGGGGACACTGCTGAAAGCATCCCAGAACTGAACAG  2064

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2065  TGTGGTCGAGCATTCCAAGTCCGTGAAGGTGCAGGAGCGGTACGACAGTGCCGTGCTGGGCACCATGCACCTGC  2138

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2139  ACCACGGCTCCTAGAGACGCTGACCTGGCTCTCGGAAACGCAGGAGTCCTTCCTGGTAGCCAGCTCAGAATACC  2212

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2213  CATGTAGCAGCAACTTGAACGAATGTCACAACTTGTACGTTTTTTATATACTTCAACTTTCTGAAAAAGTAAAC  2286

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2287  TTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGA  2360

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2361  GGTGTCCTTTTTATAAGGTGCACTTTTGGAGTTTTTCTGATGCCAATCTCAACATTGTCTTTTTAATACTGTCA  2434

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2435  CCAGATATTGCCATTTTTCTTTTTGTTAAAAGATTATATGATCAAGATAAATTGGGGTGGTAAATCAGGTGCCT  2508

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2509  GGTAATTTATCTCTTTGCACATGGGCATCATTTTAAAAAGCTTGCTTCCACTCTTTTCTGTAGAATTTGACGGA  2582

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2583  ACACAGCTATTTCCCTATGCAAGGTACAGCCTTACAAAGATTTCTGCAGTGATTTGTGTGAAGAAGAGAACGTT  2656

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2657  TGTCTTTTTCAATGAAGCTTTGCAGATCACCATGTGGTTGAAGGTTTTAGTTGTGGACACAGTGGTCCCTCCTT  2730

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2731  AATGATGAAGATCACTGCCTTGGGCTTCATGGAAAACAGGCCCAGCCTGGGGCTGCGTTTGGATTTATTGTTTT  2804

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2805  TATTCCACACTTCCTACTTGGTCTCTGGAAGTTTTACCACATGTAACAGATTCCTTTATATGTAGTGGAAATCA  2878

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2879  CTATTTGTAGAAACTGTCAGGTCAAAATATTTAACTGACTGTTGACATGTATTTTCTTTTTTCCTTGTTTTTGT  2952

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2953  TTTTTGGGGTTTTCTGCTTTAAGATATATACCACTATGTATATCCAGTTAACTGAGAGAATTTTGACTCTCTTA  3026

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 3027  ATAAAACTGCATTAAGTTTTTGATTTTGTAGAAATTAGCTTTTGTCTAGGCAACTAGTGGTTATACTCTGCAAA  3100

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 3101  TATTGTAATGAATTTTTACTTTTTTGATTTTTGTAATAAAAATTGGTGCAGATAAAATGTCAAATGAACAAACC  3174

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 3175  AGTGTTCTAAGAGTGTTACTAACATTTTGTTCTAAAACTGTCCTTCACAAATTGAATAAAAAACTCTCACACTC  3248

Query  661  -  660
             
Sbjct 3249  A  3249

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