Nucleotide Global Alignment
Description
- Query:
- TRCN0000471743
- Subject:
- XR_002957463.1
- Aligned Length:
- 2815
- Identities:
- 632
- Gaps:
- 2163
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGCGCGCTCCGCTCGGCAGCCTGTGGGACGCGACCGCGGCGCTAGTCTCGTTCCTTTGTGCTGCGGCGGCGGC 74
Query 1 ---------------------------------------------------------------ATGTCGGCGGC 11
|||||||||||
Sbjct 75 TTCTCGAGTCCTCCCCGACGCGTCCTCTAGGCCAGCGAGCCCCGCGCTCTCCGGTGACGGACCATGTCGGCGGC 148
Query 12 GGGAGCGGGCGCGGGCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCTCGCTCCGTTTCCCGCTGCACCGCG 85
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GGGAGCGGGCGCGGGCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCTCGCTCCGTTTCCCGCTGCACCGCG 222
Query 86 CCTGCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGCTGCAGCAGACACCCCACGCCCACCTGGCCTCTGAG 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCTGCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGCTGCAGCAGACACCCCACGCCCACCTGGCCTCTGAG 296
Query 160 GACTCCTTCTATGGCTGGACGCCCGTGCACTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAGTGCAGTTGGT 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GACTCCTTCTATGGCTGGACGCCCGTGCACTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAGTGCAGTTGGT 370
Query 234 GAGAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGG 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAGAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGG 444
Query 308 GACATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATTAACAAACCGGATTGTGAGGGTGAAACT 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GACATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATTAACAAACCGGATTGTGAGGGTGAAACT 518
Query 382 CCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGA 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGA 592
Query 456 GT--TTATTTCACAGAGCAGTGTAC---ATTCTT----GTCTTCC-----AGGGGAA--CTTCAACATGGAGTT 513
.| .||.||| |.|.|| || |||.|| ||..||| |||||.| .||| |||..||..
Sbjct 593 CTACGTAATTC-----GAATTG-ACTTGATTTTTTCAAGTAATCCTAGAAAGGGGGAGCATTC--CATATAGAA 658
Query 514 ACTTTTGA----------------TC--------CCT--CAGTT------TTAA---TTCAGTGTC-------- 544
|||..||| || ||| ||||| ||.| ||||||.||
Sbjct 659 ACTGCTGAAACTGCCACAGGTGCTTCTCCGAAAACCTTACAGTTGTGGCATTGAATGTTCAGTATCGCTTCCTT 732
Query 545 --------------------TAAAGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAG 598
|..|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 733 TCTGCACACGAGGCATACTGTTGAGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAG 806
Query 599 GGTTTCCAAGAGTGTGCCCAGTTTCTCTTGAACCTCCAGAATTGTCATCTGAACCATTTCTA------------ 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 807 GGTTTCCAAGAGTGTGCCCAGTTTCTCTTGAACCTCCAGAATTGTCATCTGAACCATTTCTATAACAATGGCAT 880
Query 661 -------------------------------------------------------------------------- 660
Sbjct 881 CTTAAATGGGGGTCATCAGAATGTATTTCCTAATCATATTAGTGTGGGAACAAATCGAAAGAGATGCTTGGAAG 954
Query 661 -------------------------------------------------------------------------- 660
Sbjct 955 ACTCAGAAGACTTTGGAGTAAAGAAAGCTAGAACTGAAGCTCAAAGCTTGGATTCTGCCGTGCCACTCACGAAT 1028
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1029 GGCGACACAGAAGACGATGCTGACAAAATGCACGTTGATAGGGAGTTTGCTGTTGTAACAGGTGGGAGTGGACA 1102
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1103 GTTTCCTGTTAGCTGCAACAACAATCCAATGGTTGAAGACACCAAACAGCAGGAGAGTGGTTCTGTTGGACCAA 1176
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1177 AAGAAATAGAAATATATACTGTGTCAGCAATGCAGACCCCCTGTCGTTGCAGGAATCAATATGAAAAACAGTAG 1250
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1251 CTCCGTATCGAATACATTGACAAATGGATGTGTCATCAATGGACATTTGGACTTCCCCTCCACGACCCCGCTCA 1324
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1325 GTGGGATGGAAAGCAGGAATGGCCAGTGCTTGACAGGAACTAACGGAATTAGCAGTGGATTAGCCCCAGGACAG 1398
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1399 CCGTTTCCGAGTAGCCAGGGTTCTCTCTGCATTAGTGGGACTGAGGAGCCAGAGAAGACCCTGAGAGCTAACCC 1472
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1473 TGAGTTGTGCGGTTCTCTGCACCTGAACGGGAGTCCAAGTAGCTGCATAGCCAGTAGGCCTTCCTGGGTGGAAG 1546
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1547 ACATTGGGGATAACCTGTACTATGGACACTACCACGGGTTTGGGGACACTGCTGAAAGCATCCCAGAACTGAAC 1620
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1621 AGTGTGGTCGAGCATTCCAAGTCCGTGAAGGTGCAGGAGCGGTACGACAGTGCCGTGCTGGGCACCATGCACCT 1694
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1695 GCACCACGGCTCCTAGAGACGCTGACCTGGCTCTCGGAAACGCAGGAGTCCTTCCTGGTAGCCAGCTCAGAATA 1768
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1769 CCCATGTAGCAGCAACTTGAACGAATGTCACAACTTGTACGTTTTTTATATACTTCAACTTTCTGAAAAAGTAA 1842
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1843 ACTTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGT 1916
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1917 GAGGTGTCCTTTTTATAAGGTGCACTTTTGGAGTTTTTCTGATGCCAATCTCAACATTGTCTTTTTAATACTGT 1990
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1991 CACCAGATATTGCCATTTTTCTTTTTGTTAAAAGATTATATGATCAAGATAAATTGGGGTGGTAAATCAGGTGC 2064
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2065 CTGGTAATTTATCTCTTTGCACATGGGCATCATTTTAAAAAGCTTGCTTCCACTCTTTTCTGTAGAATTTGACG 2138
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2139 GAACACAGCTATTTCCCTATGCAAGGTACAGCCTTACAAAGATTTCTGCAGTGATTTGTGTGAAGAAGAGAACG 2212
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2213 TTTGTCTTTTTCAATGAAGCTTTGCAGATCACCATGTGGTTGAAGGTTTTAGTTGTGGACACAGTGGTCCCTCC 2286
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2287 TTAATGATGAAGATCACTGCCTTGGGCTTCATGGAAAACAGGCCCAGCCTGGGGCTGCGTTTGGATTTATTGTT 2360
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2361 TTTATTCCACACTTCCTACTTGGTCTCTGGAAGTTTTACCACATGTAACAGATTCCTTTATATGTAGTGGAAAT 2434
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2435 CACTATTTGTAGAAACTGTCAGGTCAAAATATTTAACTGACTGTTGACATGTATTTTCTTTTTTCCTTGTTTTT 2508
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2509 GTTTTTTGGGGTTTTCTGCTTTAAGATATATACCACTATGTATATCCAGTTAACTGAGAGAATTTTGACTCTCT 2582
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2583 TAATAAAACTGCATTAAGTTTTTGATTTTGTAGAAATTAGCTTTTGTCTAGGCAACTAGTGGTTATACTCTGCA 2656
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2657 AATATTGTAATGAATTTTTACTTTTTTGATTTTTGTAATAAAAATTGGTGCAGATAAAATGTCAAATGAACAAA 2730
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2731 CCAGTGTTCTAAGAGTGTTACTAACATTTTGTTCTAAAACTGTCCTTCACAAATTGAATAAAAAACTCTCACAC 2804
Query 661 --- 660
Sbjct 2805 TCA 2807
