Nucleotide Global Alignment

Description

Query:
TRCN0000471743
Subject:
XR_002957465.1
Aligned Length:
4214
Identities:
660
Gaps:
3554

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTGCGCGCTCCGCTCGGCAGCCTGTGGGACGCGACCGCGGCGCTAGTCTCGTTCCTTTGTGCTGCGGCGGCGGC  74

Query    1  ---------------------------------------------------------------ATGTCGGCGGC  11
                                                                           |||||||||||
Sbjct   75  TTCTCGAGTCCTCCCCGACGCGTCCTCTAGGCCAGCGAGCCCCGCGCTCTCCGGTGACGGACCATGTCGGCGGC  148

Query   12  GGGAGCGGGCGCGGGCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCTCGCTCCGTTTCCCGCTGCACCGCG  85
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GGGAGCGGGCGCGGGCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCTCGCTCCGTTTCCCGCTGCACCGCG  222

Query   86  CCTGCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGCTGCAGCAGACACCCCACGCCCACCTGGCCTCTGAG  159
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CCTGCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGCTGCAGCAGACACCCCACGCCCACCTGGCCTCTGAG  296

Query  160  GACTCCTTCTATGGCTGGACGCCCGTGCACTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAGTGCAGTTGGT  233
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GACTCCTTCTATGGCTGGACGCCCGTGCACTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAGTGCAGTTGGT  370

Query  234  GAGAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGG  307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GAGAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGG  444

Query  308  GACATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATTAACAAACCGGATTGTGAGGGTGAAACT  381
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GACATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATTAACAAACCGGATTGTGAGGGTGAAACT  518

Query  382  CCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGA  455
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGA  592

Query  456  --------------------------------------------------------------------------  455
                                                                                      
Sbjct  593  TAACCCCAAGAAAGGCATCAGGGTTCTGGAGTGGTTGTTTGAGTGACACAGCACAAGGCCTTGATTTCATCATG  666

Query  456  --------------------------------------------------------------------------  455
                                                                                      
Sbjct  667  CTTTTGCTGTGGATGTAGTGTAGCTTGCTGAACAGGTATGGAAGCTGTCTTTGCTGTTAAGTACTTCTCCCGTT  740

Query  456  -------------------------------------------GTTTATTTCACAGAGCAGTGTACATTCTTGT  486
                                                       |||||||||||||||||||||||||||||||
Sbjct  741  TGTTTATCAACCTGCAGCTAACAGGATGTCTGCTTTTTTACAGGTTTATTTCACAGAGCAGTGTACATTCTTGT  814

Query  487  CTTCCAGGGGAACTTCAACATGGAGTTACTTTTGATCCCTCAGTTTTAATTCAGTGTCTAA-------------  547
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             
Sbjct  815  CTTCCAGGGGAACTTCAACATGGAGTTACTTTTGATCCCTCAGTTTTAATTCAGTGTCTAAAGGTTTACAAGTT  888

Query  548  --------------------------------------------------------------------------  547
                                                                                      
Sbjct  889  CAACTTACTCTATTTTATTCAGCTCTTTCACTTACTCTGCCATCACTTCCTACTTGAATCTGAGTTTTAGCTAC  962

Query  548  --------------------------------------------------------------------------  547
                                                                                      
Sbjct  963  TGTAGAGGTCTCAGACCTTTCCTTTTTAGTACTATTAGCCAGGTAAAACTTTGGTTCTTGTGAGTGGTAGGGAT  1036

Query  548  --------------------------------------------------------------------------  547
                                                                                      
Sbjct 1037  GAGTTTTTAGGACAGTATTCAAAGCCTTTTTAAAGGAACCAACTACTCAAATGCTCTACAATGCCAAAAATACA  1110

Query  548  --------------------------------------------------------------------------  547
                                                                                      
Sbjct 1111  ATACTCCTGCAGGTTTTCCCAAGCAAGGCCAAAACAATCAAAATCTGACAGAAAAACACAGCTGTTCAGCTCTG  1184

Query  548  --------------------------------------------------------------------------  547
                                                                                      
Sbjct 1185  GAATCTGATGATAGGCTACTTTTTAATGTCAGGACATCCTTCTAAACTTCCACTTACAGTGTCACATGTAAGCA  1258

Query  548  --------------------------------------------------------------------------  547
                                                                                      
Sbjct 1259  TGAAGGCTGGCTCGTTGGTGAGCCATTGCTTTGTTTTTAGGAAGACAGTTATGAATGCCATGGACAATCTCAGT  1332

Query  548  --------------------------------------------------------------------------  547
                                                                                      
Sbjct 1333  ACATGTTGTTTGTTATGATTTTATTCACGCTAAAGGAATGGGTATTAAAATTAAGTGCATATAATATAGAATTC  1406

Query  548  --------------------------------------------------------------------------  547
                                                                                      
Sbjct 1407  AGTTTCAAGTCTGAAGTTAGCGTAAATTTAGATTCTTCAGACTAACATAAAACATGATTTTGAGAAGTTAAATA  1480

Query  548  --------------------------------------------------------------------------  547
                                                                                      
Sbjct 1481  GGAAGATGCCTTTTTTAGAAGTTTAGCATATTTAGTTTATCTCCCAAATCTTGCTTAGAAATCAAATGTATATA  1554

Query  548  --------------------------------------------------------------------------  547
                                                                                      
Sbjct 1555  AGAGAAGTTAGTTACAGAGCTAGATTGATTAACTACTTCTTTAATGAAGATTTGCTATGAATTTGTTTACTCTT  1628

Query  548  --------------------------------------------------------------------------  547
                                                                                      
Sbjct 1629  TCATACCACCTTCAGATAGCTAGTCAGTTCAGCAGGAGCAGAGACCAGGTTAGCACGCGGATGGGGTGTAATTC  1702

Query  548  ------------------AGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTT  603
                              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  AGTGTTTTTGTGTTGTACAGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTT  1776

Query  604  CCAAGAGTGTGCCCAGTTTCTCTTGAACCTCCAGAATTGTCATCTGAACCATTTCTA-----------------  660
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 
Sbjct 1777  CCAAGAGTGTGCCCAGTTTCTCTTGAACCTCCAGAATTGTCATCTGAACCATTTCTATAACAATGGCATCTTAA  1850

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1851  ATGGGGGTCATCAGAATGTATTTCCTAATCATATTAGTGTGGGAACAAATCGAAAGAGATGCTTGGAAGACTCA  1924

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1925  GAAGACTTTGGAGTAAAGAAAGCTAGAACTGAAGCTCAAAGCTTGGATTCTGCCGTGCCACTCACGAATGGCGA  1998

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 1999  CACAGAAGACGATGCTGACAAAATGCACGTTGATAGGGAGTTTGCTGTTGTAACAGGTGGGAGTGGACAGTTTC  2072

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2073  CTGTTAGCTGCAACAACAATCCAATGGTTGAAGACACCAAACAGCAGGAGAGTGGTTCTGTTGGACCAAAAGAA  2146

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2147  ATAGAAATATATACTGTGTCAGCAATGCAGACCCCCTGTCGTTGCAGGAATCAGTATGCATATTATTTCTAACA  2220

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2221  TAAGTTTTTCTCAGATGTTTTGCACTTTGTTGTCCAGTGTCTTTTTAAAAATGTTATACTATAATTTGCATATC  2294

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2295  TTGGGCAAGTTTGTAGATACAAGAAGTGTTTTGGGTATATTCTGTGGACATGAAAAATGTAAGTGCAATCTTTA  2368

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2369  TTCTGATTTGAAGCTATTGCTTAATGTGCCTTGCTTATTTTTAATGAGGTTTGCATTTTTAATTTTCTGACATA  2442

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2443  TGGCCTTTGGGTGAATATACCGAACATGCTACAGTTAATATTTTCAAACCAATATACCACAAAGAGGACGACTA  2516

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2517  GCAGTAAACACTGAGAAACTAGTAAATGTGGTTCTGACTCAGCCCAGTCACTCCAGCATGGAATCTTTTACCCA  2590

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2591  GGACTTGGTTGCTCTGGTTTCTGTGGTCTTCATTCTGAGTCTGTTAAAATGATATGAAAAACAGTAGCTCCGTA  2664

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2665  TCGAATACATTGACAAATGGATGTGTCATCAATGGACATTTGGACTTCCCCTCCACGACCCCGCTCAGTGGGAT  2738

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2739  GGAAAGCAGGAATGGCCAGTGCTTGACAGGAACTAACGGAATTAGCAGTGGATTAGCCCCAGGACAGCCGTTTC  2812

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2813  CGAGTAGCCAGGGTTCTCTCTGCATTAGTGGGACTGAGGAGCCAGAGAAGACCCTGAGAGCTAACCCTGAGTTG  2886

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2887  TGCGGTTCTCTGCACCTGAACGGGAGTCCAAGTAGCTGCATAGCCAGTAGGCCTTCCTGGGTGGAAGACATTGG  2960

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 2961  GGATAACCTGTACTATGGACACTACCACGGGTTTGGGGACACTGCTGAAAGCATCCCAGAACTGAACAGTGTGG  3034

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 3035  TCGAGCATTCCAAGTCCGTGAAGGTGCAGGAGCGGTACGACAGTGCCGTGCTGGGCACCATGCACCTGCACCAC  3108

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 3109  GGCTCCTAGAGACGCTGACCTGGCTCTCGGAAACGCAGGAGTCCTTCCTGGTAGCCAGCTCAGAATACCCATGT  3182

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 3183  AGCAGCAACTTGAACGAATGTCACAACTTGTACGTTTTTTATATACTTCAACTTTCTGAAAAAGTAAACTTCGA  3256

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 3257  CAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGT  3330

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 3331  CCTTTTTATAAGGTGCACTTTTGGAGTTTTTCTGATGCCAATCTCAACATTGTCTTTTTAATACTGTCACCAGA  3404

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 3405  TATTGCCATTTTTCTTTTTGTTAAAAGATTATATGATCAAGATAAATTGGGGTGGTAAATCAGGTGCCTGGTAA  3478

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 3479  TTTATCTCTTTGCACATGGGCATCATTTTAAAAAGCTTGCTTCCACTCTTTTCTGTAGAATTTGACGGAACACA  3552

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 3553  GCTATTTCCCTATGCAAGGTACAGCCTTACAAAGATTTCTGCAGTGATTTGTGTGAAGAAGAGAACGTTTGTCT  3626

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 3627  TTTTCAATGAAGCTTTGCAGATCACCATGTGGTTGAAGGTTTTAGTTGTGGACACAGTGGTCCCTCCTTAATGA  3700

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 3701  TGAAGATCACTGCCTTGGGCTTCATGGAAAACAGGCCCAGCCTGGGGCTGCGTTTGGATTTATTGTTTTTATTC  3774

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 3775  CACACTTCCTACTTGGTCTCTGGAAGTTTTACCACATGTAACAGATTCCTTTATATGTAGTGGAAATCACTATT  3848

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 3849  TGTAGAAACTGTCAGGTCAAAATATTTAACTGACTGTTGACATGTATTTTCTTTTTTCCTTGTTTTTGTTTTTT  3922

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 3923  GGGGTTTTCTGCTTTAAGATATATACCACTATGTATATCCAGTTAACTGAGAGAATTTTGACTCTCTTAATAAA  3996

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 3997  ACTGCATTAAGTTTTTGATTTTGTAGAAATTAGCTTTTGTCTAGGCAACTAGTGGTTATACTCTGCAAATATTG  4070

Query  661  --------------------------------------------------------------------------  660
                                                                                      
Sbjct 4071  TAATGAATTTTTACTTTTTTGATTTTTGTAATAAAAATTGGTGCAGATAAAATGTCAAATGAACAAACCAGTGT  4144

Query  661  ----------------------------------------------------------------------  660
                                                                                  
Sbjct 4145  TCTAAGAGTGTTACTAACATTTTGTTCTAAAACTGTCCTTCACAAATTGAATAAAAAACTCTCACACTCA  4214

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