Nucleotide Global Alignment
Description
- Query:
- TRCN0000471778
- Subject:
- NM_001282718.2
- Aligned Length:
- 3501
- Identities:
- 218
- Gaps:
- 3264
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCTTCCCCGTTGCAAAGAGCTGTGGGAGATACCAAGAGGGCCTTGTCTGCATCTTCTAGTTCCTCTGCCAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTACCCTTTGATGACAGGGACTCAAACCATACCTCAGAGGGGAATGGCGACTCTTTGTTAGCTGATGAAGACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGACTTTGAAGACAGCTTGAATCGCAATGTGAAGAAGAGAGCAGCAAAACGACCACCGAAAACAACACCGGTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCAAAACATCCAAAGAAAGGGTCCCGAGTGGTACATCGTCATAGCCGGAAACAGTCAGAGCCACCAGCCAATGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCTTTTCAATGCTGTGAAAGCCGCCAAAAGTGACATGCAGGACTCGGGGGACTACCCTCTCATAGCTCCAGGTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CATCCTGGAAGAAGTTCCAGGGCAGCTTCTGTGAATTTGTGAGGACATTGGTCTGTCAGTGCCAGTACAGCCTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTCTATGATGGCTTCCCTATGGACGACCTCATCTCCCTGCTCACTGGCCTCTCAGACTCACAAGTCCGCGCCTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCGTCACACTAGCACCCTGGCTGCTATGAAACTGATGACCTCCCTGGTAAAAGTTGCCCTCCAACTGAGTGTGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACCAAGATAACAATCAGCGTCAGTATGAGGCTGAAAGAAACAAGGGGCCAGGGCAGAGGGCACCTGAGCGGCTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAGAGCCTGTTGGAGAAACGCAAAGAGCTCCAAGAGCATCAAGAGGAGATTGAGGGGATGATGAATGCCCTCTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAGGGGTGTCTTTGTTCATCGGTACAGGGATGTCCTTCCTGAGATCCGTGCTATCTGCATTGAGGAAATTGGGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTTGGATGCAAAGCTACAGCACGTCTTTCCTCACCGACAGCTATTTAAAATATATTGGTTGGACTCTGCATGAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAGCACCGAGAAGTCCGCCTGAAGTGTGTGAAGGCCCTGAAAGGGCTGTACGGTAACCGGGACCTGACCACACG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCTGGAGCTCTTCACCAGCCGCTTCAAGGACCGGATGGTTTCCATGGTCATGGACAGAGAGTATGATGTGGCAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGGAGGCTGTCAGATTACTGATACTTATCCTTAAGAACATGGAAGGGGTGCTGACGGACGCGGATTGTGAGAGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTCTACCCAGTTGTGTATGCCTCTCATCGAGGCCTGGCCTCTGCCGCAGGCGAATTTCTGTACTGGAAACTCTT 1184
Query 1 -------------------------ATGGGTGGAAGAGAGCAACGCCAGAGCCCAGGTGCCCAGAGGACTTTCT 49
||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 1185 CTACCCTGAGTGCGAGATAAGAATGATGGGTGGAAGAGAGCAACGCCAGAGCCCAGGCGCCCAGAGGACTTTCT 1258
Query 50 TCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAGCTCCACGACCACGCTGCTTACTTAGTAGACAACCTGTGG 123
||||||||||||||||||||||||||||||||.|||||||.|||||||||||||||||||||||||..||||||
Sbjct 1259 TCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCGAGCTCCATGACCACGCTGCTTACTTAGTAGACAGTCTGTGG 1332
Query 124 GACTGTGCAGGGACTCAGCTGAAGGACTGGGAGGGTCTGACAAGCCTGCTGCTGGAGAAGGACCAGAGC----- 192
||||||||||||.|||.||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 1333 GACTGTGCAGGGGCTCGGCTGAAGGACTGGGAGGGTCTGACAAGCCTGCTGCTGGAGAAGGACCAGAACCTGGG 1406
Query 193 --ACGTGC-------CACA--------------TGGAGCCAGGGCCAGG-GACCTTC-------CA-CCTCCTA 234
|.|||| |||| ||...||||.|||.|| .|.|||| || ||.|||.
Sbjct 1407 TGATGTGCAGGAGAGCACACTGATAGAAATCCTTGTGTCCAGTGCCCGGCAAGCTTCAGAGGGGCACCCGCCTG 1480
Query 235 GGG----------------------------------------------------------------------- 237
.||
Sbjct 1481 TGGGCCGGGTCACTGGGAGGAAGGGCTTAACCTCTAAGGAGCGCAAGACCCAAGCCGATGACAGGGTGAAGTTG 1554
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1555 ACTGAGCACCTCATCCCCCTGCTGCCCCAGCTCCTGGCCAAGTTCTCAGCTGATGCAGAGAAGGTCACTCCCCT 1628
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1629 GCTCCAGCTTCTCAGCTGCTTTGACCTCCACATCTACTGCACTGGGCGCTTGGAGAAGCACCTGGAGCTGTTCC 1702
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1703 TGCAGCAACTCCAGGAGGTGGTGGTGAAGCATGCAGAGCCAGCGGTGCTTGAGGCTGGGGCGCATGCCCTCTAC 1776
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1777 CTGCTCTGTAATCCCGAATTCACTTTCTTCAGCCGGGCGGACTTTGCCCGCAGCCAGCTAGTAGATTTGCTGAC 1850
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1851 TGACCGCTTCCAGCAGGAGCTTGAAGAGCTGTTACAGTCGTCCTTCCTAGATGAGGATGAGGTATATAATCTGG 1924
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1925 CAGCCACTCTGAAACGCCTCTCTGCCTTCTACAACACTCATGACCTGACTCGCTGGGAGCTCTATGAGCCATGT 1998
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1999 TGCCAACTCCTGCAGAAGGCTGTGGACACAGGAGAGGTTCCTCACCAGGTTATCCTGCCAGCCTTGACTCTTGT 2072
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2073 CTATTTTTCCATTCTCTGGACACTAACCCACATTTCTAAATCAGATGCTTCCCAGAAGCAGCTGTCGAGTTTGA 2146
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2147 GGGACAGAATGGTGGCCTTCTGTGAACTCTGCCAGAGTTGCCTCTCAGATGTGGATACTGAGATCCAGGAGCAG 2220
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2221 GCTTTTGTCTTATTAAGTGATCTACTTCTCATCTTTAGCCCTCAGATGATTGTTGGGGGCCGTGATTTCCTTAG 2294
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2295 GCCACTTGTCTTTTTTCCTGAAGCTACTCTCCAGTCTGAGCTAGCCAGCTTCCTCATGGACCACGTCTTCATCC 2368
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2369 AGCCGGGAGACCTGGGCAGTGGTGATTCCCAGGAGGATCATTTACAGATAGAGCGGCTACACCAGCGGCGCCGC 2442
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2443 CTCCTAGCCGGGTTCTGCAAGCTGTTGCTTTATGGGGTGCTGGAGATGGATGCAGCCTCAGATGTTTTCAAACA 2516
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2517 CTACAACAAGTTCTACAATGACTATGGTGACATTATCAAGGAAACATTAACTAGAGCAAGGCAGATTGACCGAA 2590
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2591 GTCATTGTTCCCGAATCCTGCTGCTGAGCCTCAAGCAGCTGTACACAGAACTGCTGCAGGAGCATGGGCCCCAG 2664
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2665 GGCCTGAATGAGCTTCCTGCCTTCATCGAGATGAGGGACCTGGCCCGGAGGTTTGCCTTGAGTTTTGGACCCCA 2738
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2739 GCAGCTGCAGAACCGTGACCTCGTGGTCATGCTACACAAGGAAGGCATCCAGTTCTCCTTGTCTGAGCTTCCTC 2812
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2813 CAGCTGGCTCCTCCAATCAGCCTCCAAATCTGGCATTCCTGGAGCTCCTTTCAGAGTTTTCCCCCCGACTCTTC 2886
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2887 CATCAGGACAAGCAGCTTTTACTGTCCTATCTAGAAAAGTGCCTGCAGCATGTCTCCCAGGCACCTGGCCATCC 2960
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2961 CTGGGGCCCAGTCACCACCTACTGCCACTCCCTCAGCCCTGTGGAGAACACAGCAGAGACCAGCCCTCAGGTCC 3034
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3035 TCCCCAGCTCCAAGAGGAGGCGCGTTGAAGGGCCTGCCAAGCCTAACAGAGAGGACGTCTCCTCGTCCCAGGAA 3108
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3109 GAAAGTCTGCAGCTGAACAGCATCCCGCCCACGCCCACCCTCACCTCCACAGCTGTGAAGAGCAGGCAGCCCCT 3182
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3183 GTGGGGGTTGAAAGAGATGGAGGAAGAAGATGGCTCAGAGTTGGATTTTGCCCAGGGTCAGCCCGTCGCAGGCA 3256
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3257 CCGAGAGGTCAAGGTTCTTGGGTCCACAATATTTCCAGACTCCACACAACCCTTCAGGTCCTGGCCTGGGCAAC 3330
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3331 CAGCTGATGCGACTCAGCCTTATGGAAGAGGACGAGGAAGAAGAGTTAGAAATCCAGGATGAGTCAAATGAAGA 3404
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3405 ACGGCAGGATACAGACATGCAAGCAAGTAGCTACTCTTCCACCAGTGAGCGCGGGCTGGACCTCTTAGATTCTA 3478
Query 238 ----------------------- 237
Sbjct 3479 CAGAGCTGGATATTGAGGATTTC 3501
