Nucleotide Global Alignment

Description

Query:
TRCN0000471927
Subject:
XM_017318476.1
Aligned Length:
1565
Identities:
1280
Gaps:
190

Alignment

Query    1  ----ATGACGTTGCTGATCACTGGAGATTCCATCGTTAGTGCTGAGGCAGTATGGGATCACGTCACCATGGCCA  70
                |||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGTATGAC----CTGATCACTGGAGATTCCATCGTTAGTGCTGAGGCAGTATGGGATCACGTCACCATGGCCA  70

Query   71  ACCGGGAGTTGGCATTTAAAGCTGGCGACGTCATCAAAGTCTTGGATGCTTCCAACAAGGATTGGTGGTGGGGC  144
            |||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   71  ACCGGGAGTTGGCATTTAAGGCTGGCGACGTCATCAAAGTCTTGGATGCTTCCAACAAGGATTGGTGGTGGGGC  144

Query  145  CAGATCGACGATGAGGAGGGATGGTTTCCTGCCAGCTTTGTGAGGCTCTGGGTGAACCAGGAGGATGAGGTGGA  218
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct  145  CAGATCGACGATGAGGAGGGATGGTTTCCTGCCAGCTTTGTGAGGCTCTGGGTGAACCAGGAGGATGGGGTGGA  218

Query  219  GGAGGGGCCCAGCGATGTGCAGAACGGACACCTGGACCCCAATTCAGACTGCCTCTGTCTGGGGCGGCCACTAC  292
            |||.||||||||.|||||||||||.||.||||||||||||||.|||||||||||.||||||||.||||||||||
Sbjct  219  GGAAGGGCCCAGTGATGTGCAGAATGGGCACCTGGACCCCAACTCAGACTGCCTTTGTCTGGGCCGGCCACTAC  292

Query  293  AGAACCGGGACCAGATGCGGGCCAATGTCATCAATGAGATAATGAGCACTGAGCGTCACTACATCAAGCACCTC  366
            ||||||||||||||||||||||||||||||||||||||||.||||||||.|||||.||.|||||||||||||||
Sbjct  293  AGAACCGGGACCAGATGCGGGCCAATGTCATCAATGAGATCATGAGCACGGAGCGCCATTACATCAAGCACCTC  366

Query  367  AAGGATATTTGTGAGGGCTATCTGAAGCAGTGCCGGAAGAGAAGGGACATGTTCAGTGACGAGCAACTGAAGGT  440
            |||||.|||||.||||||||.||||||||||||||.|||||||||||||||||||||||||||||.||||||||
Sbjct  367  AAGGACATTTGCGAGGGCTACCTGAAGCAGTGCCGAAAGAGAAGGGACATGTTCAGTGACGAGCAGCTGAAGGT  440

Query  441  AATCTTTGGGAACATTGAAGATATCTACAGATTTCAGATGGGCTTTGTGAGAGACCTGGAGAAACAGTATAACA  514
            .||||||||.|||||||||||.||.||||||||||||||||||||.|||||||||||||||||.|||||.||||
Sbjct  441  CATCTTTGGAAACATTGAAGACATATACAGATTTCAGATGGGCTTCGTGAGAGACCTGGAGAAGCAGTACAACA  514

Query  515  ATGATGACCCCCACCTCAGCGAGATAGGACCCTGCTTCCTAGAGCACCAAGATGGATTCTGGATATACTCTGAG  588
            |||||||.|||||||||||.||||||||||||||||||.|||||||.||||||||||||||||||||||||||.
Sbjct  515  ATGATGATCCCCACCTCAGTGAGATAGGACCCTGCTTCTTAGAGCATCAAGATGGATTCTGGATATACTCTGAA  588

Query  589  TATTGTAACAACCACCTGGATGCTTGCATGGAGCTCTCCAAACTGATGAAGGACAGCCGCTACCAGCACTTCTT  662
            |||||||||||||||||||||||.||||||||.||||||||.||||||||||||||||||||.||.||||||||
Sbjct  589  TATTGTAACAACCACCTGGATGCCTGCATGGAACTCTCCAAGCTGATGAAGGACAGCCGCTATCAACACTTCTT  662

Query  663  TGAGGCCTGTCGCCTCTTGCAGCAGATGATTGACATTGCTATCGATGGTTTCCTTTTGACTCCAGTGCAGAAGA  736
            |||||||||.||||||||||||||||||||.|||||||||||.||||||||.||||||||||||||.|||||||
Sbjct  663  TGAGGCCTGCCGCCTCTTGCAGCAGATGATCGACATTGCTATTGATGGTTTTCTTTTGACTCCAGTACAGAAGA  736

Query  737  TCTGCAAGTATCCCTTACAGTTGGCTGAGCTCCTAAAGTATACTGCCCAAGACCACAGTGACTACAGGTATGTG  810
            |||||||.|||||||||||.|||||.||||||||||||||||||||||||||.||||||||.|||||.||.||.
Sbjct  737  TCTGCAAATATCCCTTACAATTGGCCGAGCTCCTAAAGTATACTGCCCAAGATCACAGTGATTACAGATACGTT  810

Query  811  GCAGCTGCTTTGGCTGTCATGAGAAATGTGACTCAGCAGATCAACGAACGCAAGCGACGTTTAGAGAATATTGA  884
            ||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||.|.|||||||||||
Sbjct  811  GCAGCTGCTTTGGCTGTCATGAGAAATGTGACTCAGCAGATCAATGAACGCAAGCGACGTCTGGAGAATATTGA  884

Query  885  CAAGATTGCTCAGTGGCAGGCTTCTGTCCTAGACTGGGAGGGCGAGGACATCCTAGACAGGAGCTCGGAGCTGA  958
            |||||||||.||.||||||||.||||||||||||||||||||.|||||||||.|||||||||||||||||||||
Sbjct  885  CAAGATTGCGCAATGGCAGGCCTCTGTCCTAGACTGGGAGGGAGAGGACATCTTAGACAGGAGCTCGGAGCTGA  958

Query  959  TCTACACTGGGGAGATGGCCTGGATCTACCAGCCCTACGGCCGCAACCAGCAGCGGGTCTTCTTCCTGTTTGAC  1032
            ||||||||||.||||||||||||||||||||||||||.|||||||||||||||.|.||||||||||||||||||
Sbjct  959  TCTACACTGGAGAGATGGCCTGGATCTACCAGCCCTATGGCCGCAACCAGCAGAGAGTCTTCTTCCTGTTTGAC  1032

Query 1033  CACCAGATGGTCCTCTGCAAGAAGGACCTAATCCGGAGAGACATCCTGTACTACAAAGGCCGCATTGACATGGA  1106
            |||||||||||||||||||||||||||||||||||||||||||||||.||||||||.||.||||||||||||||
Sbjct 1033  CACCAGATGGTCCTCTGCAAGAAGGACCTAATCCGGAGAGACATCCTATACTACAAGGGGCGCATTGACATGGA  1106

Query 1107  TAAATATGAGGTAGTTGACATTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAGC  1180
            |||||||||||||.|||||||.||.||||||||||||||||||||.||||||||||||||.|||||.||.||||
Sbjct 1107  TAAATATGAGGTAATTGACATCGAAGATGGCAGAGATGATGACTTTAATGTCAGCATGAAAAATGCTTTCAAGC  1180

Query 1181  TTCACAACAAGGAGACTGAGGAGATACATCTGTTCTTTGCCAAGAAGCTGGAGGAAAAAATACGCTGGCTCAGG  1254
            ||||.||||||||.||.||.||..|.||||||||||||||||||||.||||||||.||||||||.|||||.||.
Sbjct 1181  TTCATAACAAGGAAACGGAAGAAGTGCATCTGTTCTTTGCCAAGAAACTGGAGGAGAAAATACGTTGGCTTAGA  1254

Query 1255  GCTTTCAGAGAAGAGAGGAAAATGGTACAGGAAGATGAAAAAATTGGCTTTGAAATTTCTGAAAACCAGAAGAG  1328
            |||||||||||||||||.|||||||||||.|||||||||||||||||||||||.|||||||||||.||||||||
Sbjct 1255  GCTTTCAGAGAAGAGAGAAAAATGGTACAAGAAGATGAAAAAATTGGCTTTGAGATTTCTGAAAATCAGAAGAG  1328

Query 1329  GCAGGCTGCAATGACTGTGAGAAAAGTCCCTAAGCAAAAAG-------------GTGTCAACTCTGCCCGCTCA  1389
            .|||||||||||||||||||||||||...||||.||.||||             .||.| |||.|         
Sbjct 1329  ACAGGCTGCAATGACTGTGAGAAAAGCTTCTAAACAGAAAGTAACCCAAAGAAAATGGC-ACTAT---------  1392

Query 1390  GTTCCTCCTTCCTACCCACCACCGCAGGACCCGTTAAACCACGGCCAGTACCTGGTCCCCGACGGCATCGCTCA  1463
                                                                                      
Sbjct 1393  --------------------------------------------------------------------------  1392

Query 1464  GTCGCAGGTCTTTGAGTTCACCGAACCCAAGCGCAGCCAGTCACCATTCTGGCAAAACTTCAGCAGGTTAACCC  1537
                                                                                      
Sbjct 1393  --------------------------------------------------------------------------  1392

Query 1538  CCTTCAAAAAA  1548
                       
Sbjct 1393  -----------  1392

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