Nucleotide Global Alignment

Description

• Query: TRCN0000471971
• Subject: XM_006533856.3
• Aligned Length: 784
• Identities: 569
• Gaps: 140

Alignment

Query   1  ----------------------------------------------------------ATGACGGGCAC-----  11
                                                                     |||.|...|||     
Sbjct   1  ATGGATCTGCAGAGACCGGACTCCTACCAGGGCGGAGCTGGCCCTCATTTCAGCGAGCATGTCCTACACAAGAC  74

Query  12  -------------GCCAGGCGCCGTTGCCACCCGGGA----------------------TGGCGAGG-------  43
                        |.|| |||.||||       ||||                      ||.|.|||       
Sbjct  75  CATTCTGGTTGGTGACA-GCGGCGTT-------GGGAAGACATCTCTACTGGTTCAGTTTGACCAGGGGAAGTT  140

Query  44  --CCCCCGAGCGCTCC-------CCGCCCTGCAGTCCGAGCTA-CGACCTCACGGGCAAGGTGATGCTTCTGGG  107
             .|||||   |||||       ||.||.||        |.|| ||...||||      .|||||||||||.||
Sbjct 141  CATCCCCG---GCTCCTTCTCAGCCACCGTG--------GGTATCGGATTCAC------AGTGATGCTTCTTGG  197

Query 108  AGACACAGGCGTCGGCAAAACATGTTTCCTGATCCAATTCAAAGACGGGGCCTTCCTGTCCGGAACCTTCATAG  181
           ||||.|.||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 198  AGACTCGGGCGTCGGCAAAACCTGTTTCCTGATCCAATTCAAAGACGGGGCCTTCCTGTCCGGAACCTTCATAG  271

Query 182  CCACCGTCGGCATAGACTTCAGGAACAAGGTGGTGACTGTGGATGGCGTGAGAGTGAAGCTGCAGATCTGGGAC  255
           |||||||||||||||||||||||||.||.||||||||.||||||||.|..||.||||||||.||||||||||||
Sbjct 272  CCACCGTCGGCATAGACTTCAGGAATAAAGTGGTGACAGTGGATGGTGCCAGGGTGAAGCTTCAGATCTGGGAC  345

Query 256  ACCGCTGGGCAGGAACGGTTCCGAAGCGTCACCCATGCTTATTACAGAGATGCTCAGGCCTTGCTTCTGCTGTA  329
           ||.||.||.|||||.||.|||||.||.||.|||||||||||||||.|||||||||||||.|||||.|||.||||
Sbjct 346  ACTGCAGGACAGGAGCGCTTCCGCAGTGTGACCCATGCTTATTACCGAGATGCTCAGGCTTTGCTCCTGTTGTA  419

Query 330  TGACATCACCAACAAATCTTCTTTCGACAACATCAGGGCCTGGCTCACTGAGATTCATGAGTATGCCCAGAGGG  403
           |||||||||||||.|.||.|||||.|||||||||||||||||||||||.|||||||||||||||||||||||.|
Sbjct 420  TGACATCACCAACCAGTCCTCTTTTGACAACATCAGGGCCTGGCTCACAGAGATTCATGAGTATGCCCAGAGAG  493

Query 404  ACGTGGTGATCATGCTGCTAGGCAACAAGGCGGATATGAGCAGCGAAAGAGTGATCCGTTCCGAAGACGGAGAG  477
           ||||||||||.|||||.||||||||||||||.|||.|.|||||||||||.|||||||||||.|||||.||||||
Sbjct 494  ACGTGGTGATTATGCTTCTAGGCAACAAGGCCGATGTAAGCAGCGAAAGGGTGATCCGTTCTGAAGATGGAGAG  567

Query 478  ACCTTGGCCAGGGAGTACGGTGTTCCCTTCCTGGAGACCAGCGCCAAGACTGGCATGAATGTGGAGTTAGCCTT  551
           ||..||||||||||.||.||||||||.|||.||||||||||.|||||||||||||||||.||||||||.|||||
Sbjct 568  ACACTGGCCAGGGAATATGGTGTTCCTTTCATGGAGACCAGTGCCAAGACTGGCATGAACGTGGAGTTGGCCTT  641

Query 552  TCTGGCCATCGCCAAGGAACTGAAATACCGGGCCGGGCATCAGGCGGATGAGCCCAGCTTCCAGATCCGAGACT  625
           ||||||.||.||||||||||||||||||||.||.|||...|||.|.||||||||||||||||||||||||||||
Sbjct 642  TCTGGCAATTGCCAAGGAACTGAAATACCGTGCAGGGAGGCAGCCTGATGAGCCCAGCTTCCAGATCCGAGACT  715

Query 626  ATGTAGAGTCCCAGAAGAAGCGCTCCAGCTGCTGCTCCTTCATG  669
           ||||.|||||||||||||||||||||||||||||||||||..||
Sbjct 716  ATGTGGAGTCCCAGAAGAAGCGCTCCAGCTGCTGCTCCTTTGTG  759