Nucleotide Global Alignment

Description

Query:
TRCN0000471972
Subject:
XR_001748820.1
Aligned Length:
4545
Identities:
111
Gaps:
4434

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GAAGTCTCACGGCCGGAGTTGGTGGTCTGGGAACCCACGTGGGCTGGGTTTCGGATTGCTCTGCTGGTCCGGCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCTGGAGCGCCCACCCTGGCCTAGTCGCCATGGGGAAGCTGCGCCGGCGCTACAACATCAAGGGGCGCCAGCAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCGGGCCCCGGACCCTCGAAGGGCCCCCCCGAGCCGCCCCCCGTGCAGCTGGAACTGGAGGACAAGGACACGTT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAAGGGAGTTGATGCAAGCAACGCGCTCGTTCTACCGGGGAAGAAGAAAAAGAAGACCAAAGCCCCTCCCCTGT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CGAAGAAGGAGAAGAAGCCTCTGACCAAGAAGGAGAAGAAAGTGCTGCAGAAAATCTTAGAACAGAAGGAGAAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AAGAGCCAGCGAGCAGAGATGCTACAGAAGCTGAGTGAAGTCCAGGCTTCCGAAGCTGAGATGAGACTCTTTTA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TACCACTTCCAAGCTAGGCACTGGGAACCGCATGTATCACACCAAAGAGAAGGCTGACGAGGTGGTAGCCCCGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCCAGGAGAAGATCAGTAGCCTCAGCGGTGCCCACCGGAAGCGTCGCCGCTGGCCCTCAGCTGAGGAGGAGGAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GAGGAGGAGGAGGAGTCGGAATCGGAGCTGGAGGAGGAGTCGGAGCTGGACGAGGACCCAGCTGCTGAGCCGGC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TGAGGCTGGTGTGGGGACCACCGTGGCACCTCTGCCGCCAGCTCCAGCACCCAGCAGTCAGCCCGTGCCGGCTG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGATGACTGTTCCTCCTCCTCCAGCTGCAGCCCCACCACTGCCCAGGGCCCTGGCTAAGCCCGCCGTCTTCATC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CCCGTGAACCGCTCCCCGGAAATGCAGGAGGAACGGCTGAAGCTCCCAATTCTCTCCGAAGAACAAGTAATCAT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GGAGGCTGTGGCCGAGCACCCCATCGTCATCGTGTGTGGTGAGACCGGCAGCGGGAAGACCACACAGGTGCCTC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGTTTCTCTATGAAGCAGGCTTCAGCAGTGAAGACAGCATCATCGGTGTCACGGAGCCCCGCCGAGTGGCCGCC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GTGGCCATGTCCCAGCGAGTGGCCAAGGAGATGAATCTGTCCCAGCGGGTCGTCTCCTACCAGATCCGGTATGA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AGGAAACGTGACAGAGGAGACCAGAATCAAGTTCATGACGGATGGTGTGCTGCTTAAAGAAATCCAGAAGGACT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TCCTGCTGCTGCGGTACAAGGTGGTGATCATCGACGAGGCCCACGAGAGGAGCGTGTACACGGACATCCTCATC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GGCCTCCTGTCCCGCATTGTGACTCTCCGGGCTAAGAGGAACCTGCCACTCAAGCTGCTCATCATGTCGGCCAC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GCTGCGGGTGGAGGACTTCACCCAGAACCCACGGCTCTTCGCCAAGCCGCCGCCGGTCATCAAGGTGGAATCCA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GGCAGTTCCCAGTGACTGTGCATTTCAACAAGCGGACACCGCTGGAAGACTACAGTGGCGAGTGCTTCCGGAAG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GTCTGCAAGATCCACCGGATGCTGCCCGCAGGTGGCATCCTGGTGTTCCTGACGGGGCAGGCTGAGGTGCATGC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GCTGTGCCGCAGGCTCAGGAAGGCTTTCCCACCCTCCAGAGCCCGGCCACAAGAAAAGGACGACGATCAGAAAG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  ACTCGGTGGAGGAAATGCGGAAGTTTAAGAAGTCAAGGGCCAGGGCCAAGAAGGCGCGGGCTGAGGTGCTGCCC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CAGATCAACTTGGATCATTACTCGGTGTTACCGGCAGGCGAAGGCGATGAGGACAGGGAGGCAGAAGTGGATGA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GGAAGAGGGGGCCCTGGACTCCGACCTCGATCTGGACCTGGGGGATGGCGGGCAAGATGGAGGTGAGCAGCCGG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  ATGCCTCCCTCCCGCTCCACGTGCTCCCGCTGTACTCTCTGCTGGCCCCAGAGAAGCAAGCACAGGTCTTTAAG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CCTCCACCGGAGGGGACTCGGTTGTGTGTTGTGGCCACCAATGTGGCCGAGACGTCGCTTACCATCCCTGGCAT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CAAGTACGTGGTGGACTGTGGGAAGGTCAAGAAACGCTACTACGACCGCGTCACTGGCGTATCCTCCTTCCGTG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TCACCTGGGTCTCCCAGGCATCAGCTGACCAGCGAGCGGGCAGAGCAGGACGGACGGAGCCCGGCCACTGCTAC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AGGCTGTATTCATCTGCGGTTTTTGGTGACTTCGAGCAGTTTCCTCCTCCAGAAATCACCCGGAGGCCTGTTGA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  AGACTTAATCCTTCAAATGAAGGCGCTCAACGTTGAAAAGGTCATCAACTTCCCCTTCCCGACGCCCCCCTCCG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TGGAAGCCCTTCTTGCCGCCGAGGAGCTGTTGATCGCACTGGGTGCCCTGCAACCGCCCCAGAAAGCAGAAAGG  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GTGAAGCAACTGCAGGAGAACCGGCTGAGCTGCCCCATCACTGCGCTGGGCCGGACAATGGCCACATTCCCCGT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GGCACCCCGCTACGCTAAGATGCTGGCACTGAGCCGACAACACGGCTGCCTGCCCTATGCCATCACCATCGTGG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CCAGCATGACGGTGCGGGAGCTGTTTGAGGAGCTGGACAGACCAGCGGCCAGTGACGAGGAGCTCACCAGGCTG  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  AAGAGCAAGCGGGCCCGGGTGGCCCAGATGAAGAGGACCTGGGCAGGGCAGGGGGCTTCTCTGAAGCTCGGCGA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  CCTCATGGCGCCGTGGGAGCCTGTGAGTATGCCAGCTGCACACCCCAGTTTTGCGAAGCCAACGGGCTGCGGTA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  CAAAGCCATGATGGAGATCCGGCGCCTGCGGGGCCAGCTGACCACCGCAGTCAATGCCGTGTGCCCCGAGGCTG  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  AGCTCTTCGTGGATCCCAAGATGCAGCCGCCCACCGAGAGCCAGGTGACCTACCTGCGACAGATCGTGACGGCA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  GGCCTGGGGGACCACTTGGCCCGCAGGGTCCAGAGCGAGGAGATGCTGGAGGACAAGTGGAGGAACGCCTACAA  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  GACCCCTCTCCTCGACGACCCTGTCTTCATCCACCCCAGCTCCGTCCTTTTCAAAGAGCTCCCCGAGTTTGTGG  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  TCTACCAGGAAATCGTGGAGACCACTAAGATGTACATGAAAGGCGTCTCTAGCGTGGAGGTCCAGTGGATCCCG  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  GCCCTGCTGCCCTCTTACTGCCAGTTTGACAAGCCCCTGGAGGAACCAGCCCCTACATACTGCCCCGAGCGGGG  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  GCGGGTGCTGTGTCACCGGGCCAGCGTGTTCTATCGCGTGGGCTGGCCGCTCCCCGCCATCGAGGTGGATTTTC  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  CAGAGGGGATTGACCGCTACAAGCACTTTGCCCGGTTCCTGCTGGAAGGGCAGGTCTTCCGCAAGCTGGCCTCA  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  TACCGGAGCTGTCTGCTGTCCAGCCCCGGCACCATGCTGAAGACGTGGGCCAGGCTGCAGCCCCGTACGGAGAG  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  CCTTCTGCGAGCCCTGGTTGCAGAGAAGGCTGACTGCCATGAAGCCTTGCTGGCTGCTTGGAAGAAAAACCCCA  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  AATACCTGCTGGCTGAGTACTGTGAGTGGCTTCCACAGGCCATGCACCCCGATATCGAGAAAGCCTGGCCCCCC  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  ACCACTGTCCACTGACCAGAAACCTGGCTGCAGGGCCGAGGACTGGTTTGGGGACTGGAGGGCTGGCAGCAGCC  3626

Query    1  ----------------------------ATGGGCTTCGTGGCCTGCTCTCAGGAAGTGGGTCAAGCCCTGGGAA  46
                                        ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627  TGTCACCGTGCGACCGTGACCACCTGGCATGGGCTTCGTGGCCTGCTCTCAGGAAGTGGGTCAAGCCCTGGGAA  3700

Query   47  CCCTCATCCATGAGAGCTCGATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGG---------  111
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
Sbjct 3701  CCCTCATCCATGAGAGCTCGATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTT  3774

Query  112  --------------------------------------------------------------------------  111
                                                                                      
Sbjct 3775  GAACTGTTTATTATATGGTGGATGATGATTTCATCTCACGTGCTGGACGCTGTTCTGTTCAGTGTGCTCTTTGG  3848

Query  112  --------------------------------------------------------------------------  111
                                                                                      
Sbjct 3849  ACTACATTAGTCCCCTGTGGAGCAGCAGGGCTGGAGATCTCTGCAGTCCCTTCCCCGCCCGCCCTGCCAGAAGG  3922

Query  112  --------------------------------------------------------------------------  111
                                                                                      
Sbjct 3923  CCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCCTCTCCAGAGTCAGGGAGGGCTGCCCAGCCCTG  3996

Query  112  --------------------------------------------------------------------------  111
                                                                                      
Sbjct 3997  GCCTCACAGCCGTCCCAGATGTTAGGTGAGCCACTGAGCTCTGTGTTGACCTTGAGGGGCCTGGCTGGGGGCCC  4070

Query  112  --------------------------------------------------------------------------  111
                                                                                      
Sbjct 4071  CCAGGCTCCATGCCTTCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGTTATGGCAACAGGGAGTGGGCATCT  4144

Query  112  --------------------------------------------------------------------------  111
                                                                                      
Sbjct 4145  CATCTGCCTGTGGTCAGCTCTCAGACGGCAGGGAGCGGAGCTGACGTTGGCTGTGCTTGGTCACCGCTGCCATG  4218

Query  112  --------------------------------------------------------------------------  111
                                                                                      
Sbjct 4219  CCGCAGAGGATGCGCCTAGCTGGGCTGGGGCCACACGACTATTATGTTGGCCTTGAACGGGGACTGCAGAGCCC  4292

Query  112  --------------------------------------------------------------------------  111
                                                                                      
Sbjct 4293  TCAGTTTGTCTCCCTTGTTCCTCTGTGGCTGAGGTGGGAGGGGGAGGGTGGGGTAGGTCCCCCAGCAAGAAAGA  4366

Query  112  --------------------------------------------------------------------------  111
                                                                                      
Sbjct 4367  GGGACAGGAGCACCCCAGGCAGGACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAG  4440

Query  112  --------------------------------------------------------------------------  111
                                                                                      
Sbjct 4441  ATGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACA  4514

Query  112  -------------------------------  111
                                           
Sbjct 4515  GTTATGGAATAAAATGTTCCTTGCACCCAGA  4545

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