Nucleotide Global Alignment
Description
- Query:
- TRCN0000472048
- Subject:
- NR_028319.1
- Aligned Length:
- 5698
- Identities:
- 310
- Gaps:
- 5363
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGACGAAGCAGGGAGAGAGTGAACTTCAGCCCCGTCCCCTCCCCACTGCCACGGCTGGGGCAACCCAACCCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCTGAAGCGGCTTGGCTTGACCTGCGGAAGCGCGGGCCGGGATGGCGTGGGGAGAGGGAGGTAGGTGCCACTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCTGCAGATGACGAGTGGGTTGGGGGCTTGCTGTGGGACAAGAGGTTCAGGTTCCGGCCTGCGCCTTCCACTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGCGGTGGCGCTCTCTGCCTGCGGTTTTCCAGGAGGCCGATCTACCCCAGGGACACTCTCATCCTTCAGGCGGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTCCTGGACGCCCTTTCCTCCCCTTGCCTCCCAGCCTGACCTGGCTCTTTCGCCCCTCGGAGAACCGGTTGCAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGAGTTTTCGAAAGACTTATCTTTCTGCAGGCTCGCCTCTGAGCTTTGTCTCCTTGGAGCCACCTCACTTAGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGCTTCGGATGTGGATGCAGATTTGAACCATGTTGCGTCCCCAGGGACTGCTATGGCTCCCTTTGTTGTTCAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTCTGTCTGTGTCATGTTAAACTCCAATGTTCTTCTGTGGATAACTGCTCTTGCCATCAAGTTCACCCTCATTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACAGCCAAGCACAGTATCCAGTTGTCAACACAAATTATGGTAAAATCCAGGGCCTAAGAACACCATTACCCAGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAGATCTTGGGTCCAGTGGAGCAGTACTTAGGGGTCCCCTATGCCTCACCCCCAACTGGAGAGAGGCGGTTTCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCCACCAGAATCCCCATCCTCCTGGACTGGCATCCGAAATGCTACTCAGTTTTCTGCTGTGTGCCCCCAGCACC 814
Query 1 --------------------------ATGCTGCCCATCTGGTTTACCACCAGTTTGGATACTTTGATGACCTAT 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGGATGAAAGATTCTTATTGCATGACATGCTGCCCATCTGGTTTACCACCAGTTTGGATACTTTGATGACCTAT 888
Query 49 GTTCAAGATCAAAATGAAGACTGCCTTTACTTAAACATCTATGTGCCCATGGAAGATGGAACCAACATAAAGAG 122
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GTTCAAGATCAAAATGAAGACTGCCTTTACTTAAACATCTATGTGCCCATGGAAGAT----------------- 945
Query 123 AAATGCAGACGATATAACCAGTAATGACCATGGTGAAGATAAAGATATTCATGAACAGAACAGTAAGAAGCCTG 196
|||||||||||||||||||||||||||||||
Sbjct 946 -------------------------------------------GATATTCATGAACAGAACAGTAAGAAGCCTG 976
Query 197 TTATGGTCTATATCCATGGGGGATCTTACATGGAGGGAACCGGTAACATGATTGATGGCAGCATTTTGGCCAGC 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 977 TTATGGTCTATATCCATGGGGGATCTTACATGGAGGGAACCGGTAACATGATTGATGGCAGCATTTTGGCCAGC 1050
Query 271 TATGGGAACGTCATCGTTATCACCATTAACTACCGTCTGGGAATACTAGGTAT--------------------- 323
||||||||||||||||||||||||||||||||||||||||||||||||||..|
Sbjct 1051 TATGGGAACGTCATCGTTATCACCATTAACTACCGTCTGGGAATACTAGGGTTTTTAAGTACCGGTGACCAGGC 1124
Query 324 -GCAAGAGGCACGTTTGTG----TGGGAGCTCAAAAATGTTTAATTATT--------TT-----AAATCT---- 375
||||.|||||..|.||.| || |.|||.| ||.||..|.| || .|||.|
Sbjct 1125 AGCAAAAGGCAACTATGGGCTCCTG---GATCAGA----TTCAAGCACTGAGGTGGATTGAGGAGAATGTCGGA 1191
Query 376 -CCTTT--------CACTAATTTAATAAATTTTTTT-------------------------------------- 402
||||| |.|.||...|.|.|.|.|.|||
Sbjct 1192 GCCTTTGGCGGGGACCCCAAGAGAGTGACTATCTTTGGCTCGGGGGCTGGGGCCTCCTGTGTCAGCCTGTTGAC 1265
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1266 CCTGTCCCACTACTCAGAAGGTCTCTTCCAGAAGGCCATCATTCAGAGCGGCACTGCCCTGTCCAGCTGGGCAG 1339
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1340 TGAACTACCAGCCGGCCAAGTACACTCGGATATTGGCAGACAAGGTCGGCTGCAACATGCTGGACACCACGGAC 1413
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1414 ATGGTAGAATGTCTGAAGAACAAGAACTACAAGGAGCTCATCCAGCAGACCATCACCCCGGCCACCTACCACAT 1487
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1488 AGCCTTTGGGCCGGTGATCGACGGCGACGTCATCCCAGACGACCCCCAGATCCTGATGGAGCAAGGCGAGTTCC 1561
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1562 TCAACTACGACATCATGCTGGGCGTCAACCAAGGGGAAGGCCTGAAGTTCGTGGACGGCATCGTGGATAACGAG 1635
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1636 GACGGTGTGACGCCCAACGACTTTGACTTCTCCGTGTCCAACTTCGTGGACAACCTTTACGGCTACCCTGAAGG 1709
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1710 GAAAGACACTTTGCGGGAGACTATCAAGTTCATGTACACAGACTGGGCCGATAAGGAAAACCCGGAGACGCGGC 1783
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1784 GGAAAACCCTGGTGGCTCTCTTTACTGACCATCAGTGGGTGGCCCCCGCCGTGGCCACCGCCGACCTGCACGCG 1857
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1858 CAGTACGGCTCCCCCACCTACTTCTATGCCTTCTATCATCACTGCCAAAGCGAAATGAAGCCCAGCTGGGCAGA 1931
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1932 TTCGGCCCATGGCGATGAAGTCCCCTATGTCTTCGGCATCCCCATGATCGGTCCCACAGAGCTCTTCAGTTGTA 2005
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2006 ATTTCTCCAAGAACGACGTCATGCTCAGTGCCGTGGTGATGACCTACTGGACGAACTTCGCCAAAACTGGTGAT 2079
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2080 CCAAACCAACCAGTTCCTCAGGATACCAAGTTCATTCATACAAAACCCAATCGCTTTGAAGAAGTGGCCTGGTC 2153
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2154 CAAGTATAATCCCAAAGACCAGCTCTATCTGCATATTGGCTTGAAACCCAGAGTGAGAGATCACTACCGGGCAA 2227
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2228 CGAAAGTGGCTTTCTGGTTGGAATTGGTTCCTCATTTGCACAACTTGAACGAGATATTCCAGTATGTTTCAACA 2301
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2302 ACCACAAAGGTTCCTCCACCAGACATGACATCATTTCCCTATGGCACCCGGCGATCTCCCGCCAAGATATGGCC 2375
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2376 AACCACCAAACGCCCAGCAATCACTCCTGCCAACAATCCCAAACACTCTAAGGACCCTCACAAAACAGGGCCCG 2449
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2450 AGGACACAACTGTCCTCATTGAAACCAAACGAGATTATTCCACCGAATTAAGTGTCACCATTGCCGTCGGGGCG 2523
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2524 TCGCTCCTCTTCCTCAACATCTTAGCCTTTGCGGCGCTGTACTACAAAAAGGACAAGAGGCGCCATGAGACTCA 2597
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2598 CAGGCACCCCAGTCCCCAGAGAAACACCACAAATGATATCACTCACATCCAGAACGAAGAGATCATGTCTCTGC 2671
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2672 AGATGAAGCAGCTGGAACACGATCACGAGTGTGAGTCGCTGCAGGCACACGACACGCTGAGGCTCACCTGCCCT 2745
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2746 CCAGACTACACCCTCACGCTGCGCCGGTCGCCGGATGACATCCCATTTATGACGCCAAACACCATCACCATGAT 2819
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2820 TCCAAACACATTGATGGGGATGCAGCCTTTACACACTTTTAAAACCTTCAGTGGAGGACAAAACAGTACAAATT 2893
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2894 TACCCCACGGACATTCCACCACTAGAGTATAGCTTTTCCCTATTTCCCCTCCTATCCCTCTGCCCCTACTGCTC 2967
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2968 AGCAATGTAAAAGAGACAAATAAGGAGAAAGAAAATCTCCAAACCAGGAATGTTTTTGTGCCACTGACTTTAGA 3041
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3042 TAAAAATGCAAAAGGGCAGTCATCCTGTCCCAGCAGACCCTTCTCATTGGCATTTTCCAGTATTGTGAGATCAA 3115
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3116 TTTCTGACCATATGAAATGTGAAAAGTATATGTTTCTGTTACAATACTGCTTTAAGATCTAAACCATGCCAACA 3189
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3190 GATGTTTCGTGTGACTAGGACATCACCATTTCAAGGAACTGTGTGTTTCCAACATCATGGTAGCAGCACACACT 3263
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3264 TCCAAAGCTCAGCCAGGGACACTTAATATTTTTTAATTACAATGGAAATTTAAACATTTTTATGTGGGCTACAC 3337
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3338 AATGGATGGCTCTTCTTAAGTGAAGAAAGACTCTATAGGCTTTTACACAGCACATGAAGCAGTAATCCAGAAAG 3411
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3412 AAGGAAATGCAGAATTTTATTATCAAAGTAAGCGAATTGACTGTGCAGAAAAATTGTAGGGTTCTGTGGAAGGA 3485
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3486 GGTATTCTGCCAGCCTGAACTATATTTAAGAAACTTTGTAAAAAATAAAAATGTATATAGCTGTGAGCTCAAAC 3559
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3560 AAAAACTGCAGACAAACAAAAAAGAGAAAAGCTTTTATTTGTGTTTTCAGTTTGAAAGAACTTTTAGCAAGGTT 3633
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3634 GTGCTTTCAAACACATATTAGTCCTACCACCTTAGTTCCTCTACAGCAAAAGAGGCTTTTCTTCTTAATTACAT 3707
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3708 GTAAACAAAGACATGGGATTTTCTGACGTAAGATTTTCATTTGTAGGAATATGTGATGTCAAATGGAAGACTCA 3781
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3782 GAAGTTTTGTGTGGCCTATTTCTCCCTGTCAGGTTGCACAGATGCATGTAGAGCATTCTTAGGAGACCATTGTT 3855
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3856 TTAGAAAACTTTGATTTGTACATGTTAGTTTTCATGAAATTGCAACACAGAGATAGGTCCTAAAAGTGGAATGT 3929
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3930 ATTTAAAACTTGTTGAATTAGACACACACACACAGACACACACAAAGAATCAGCAGAGAAAACAAAATACAAGT 4003
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4004 CCTGTTCTGTAGTTCTTGCCCTTTGAATATATTTGGGAAGAGTTGCTTCCTATTTCAGGACCCTGCCAAAAAAG 4077
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4078 AAGAAAGCTTGCCTTTGGTGGGGCTATGCCCCTTGGAGTAAATACAGCTCTGTGTTCCCTAGCAGCTGCCGGAG 4151
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4152 GATTTGGCTGATGAAGTACCTGCTCAGCTTAGCTAATCAGATTAAAGGAAGACATGTATGTCTTTTGTTTAAGC 4225
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4226 ACCTAGTCCCTTATGTATCAGTAAACAGGTTTTTAAAAATCTTTTATGTCATTTATAGGATAAAACATATGCTT 4299
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4300 GTCTGAAAATATCACCTTTTGTGGATTTATCTGATCACCAAATAATAAATATTAAGAAGAATGGGGGAAAAAGG 4373
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4374 ATAGAATATTAAAACTGCTTTGCATAGGTTTTTGGGGAAATTAGGATATCTTCACTGACAAGACACTGAATGGA 4447
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4448 ATTTATTCACCCATTTTAAATTGGTTACTTGGGGATCAGAGATTTGTCTCTCCAACAGCTTGTGGTTTTCTTAT 4521
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4522 TACTCATTTTCAGGAAAGTTTGTAGTATTACAAGGCAGAAGGAAACACAGTAGCAATGGTTGCTCTATATTTTG 4595
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4596 TCTTTCAAAGATTACTGCATTACCAAGAAACAGTAGCCAAAGATGTTTGAAGATCATGTCCCTTAGCTGCATTG 4669
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4670 TGGGTTATTCTAGAAATCCAATGTTAAATGCCTCTACTAAAGTGGGGATTCCCCATAAAAATTGTCCAGCTACC 4743
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4744 TGACTCTTTTGCAATAACAACTTTGATTACTGAATCCATACACTCAAACTATAGTGATATATCAGTGTTTGGGA 4817
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4818 GTGACCTCTAGAAAAAAGAAAACTGTTTTTAGAAATACATAAAATCACTTCCAAATCCTGTTGCTTATGTTGGG 4891
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4892 TTAAATTTGAAAGCAATTCTCTATATATAAATATGTGAAATATTATGATCTGAACTTAGCACACATGAAGCAAC 4965
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4966 ATTTCTTTGCTACACAGAGGTGTCTTGGAAAGATTTCATTCCCAATTCATTTTTCATAGATCTATAATCAGGCA 5039
Query 403 -------------------------------------------------------------------------- 402
Sbjct 5040 ATTTCTGCAAGCAATGTATGACCCCACCTGAGCAACCACAAATAGGCTCTCCATGAAACTGCAAAGGAACTGAT 5113
Query 403 -------------------------------------------------------------------------- 402
Sbjct 5114 GTGTGGCATCCATGCTGGTTTTGTCTGTCTATAATATGAATTCAAGTATCTGTTCATATTTCCAATTGTCTCCT 5187
Query 403 -------------------------------------------------------------------------- 402
Sbjct 5188 GCTAGCAATATGTGCCACAACATGACAGTCTTGTGACATCTTAAGGAAAAGAAGAGTTCCTGTTAAATGAATAG 5261
Query 403 -------------------------------------------------------------------------- 402
Sbjct 5262 CTTTAGCTTTTACAGGGGATTATGATTAAAAGTGATTTAGTACATCTTACATGATATCTCATTTCTACGTGAAA 5335
Query 403 -------------------------------------------------------------------------- 402
Sbjct 5336 AGAAGTTATAGAATCTTCATAGAGTTCCATGAGAAAAATATACTTGCTATTTATAGAAAACGAGAAAAAAGAAA 5409
Query 403 -------------------------------------------------------------------------- 402
Sbjct 5410 AAAATGAGAAACAAGTAAGAAAAAATCCTTTCCTAGGCTTTTCCTTGATCTTCAGAGGCACACAGGGTTTAATG 5483
Query 403 -------------------------------------------------------------------------- 402
Sbjct 5484 GTTCCTTAGGTTATTATTTTGAGGTTTTGTTCTTTCTTTTGCCTTAAGTAATGACAGAAGATATATATGGCCAG 5557
Query 403 -------------------------------------------------------------------------- 402
Sbjct 5558 ACACATATGTATAAACTTTTCAGCAGCATTTTAATAATAAAATATCACACTATTTTCTAATGCTTTGTACAAAC 5631
