Nucleotide Global Alignment
Description
- Query:
- TRCN0000472048
- Subject:
- NR_046355.1
- Aligned Length:
- 5403
- Identities:
- 370
- Gaps:
- 5008
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTACAGGGGAAAAGGAGGGAAAAGGCCAGGGCTGGAGATGGCGAAAGCAGGAGGACTTCTGCAAACTGTTGCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTGGAGTTTTCGAAAGACTTATCTTTCTGCAGGCTCGCCTCTGAGCTTTGTCTCCTTGGAGCCACCTCACTTAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACAGCTTCGGATGTGGATGCAGATTTGAACCATGTTGCGTCCCCAGGGACTGCTATGGCTCCCTTTGTTGTTCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTCTGTCTGTGTCATGTTAAACTCCAATGTTCTTCTGTGGATAACTGCTCTTGCCATCAAGTTCACCCTCATT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GACAGCCAAGCACAGTATCCAGTTGTCAACACAAATTATGGTAAAATCCAGGGCCTAAGAACACCATTACCCAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGAGATCTTGGGTCCAGTGGAGCAGTACTTAGGGGTCCCCTATGCCTCACCCCCAACTGGAGAGAGGCGGTTTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGCCACCAGAATCCCCATCCTCCTGGACTGGCATCCGAAATGCTACTCAGTTTTCTGCTGTGTGCCCCCAGCAC 518
Query 1 ---------------------------ATGCTGCCCATCTGGTTTACCACCAGTTTGGATACTTTGATGACCTA 47
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTGGATGAAAGATTCTTATTGCATGACATGCTGCCCATCTGGTTTACCACCAGTTTGGATACTTTGATGACCTA 592
Query 48 TGTTCAAGATCAAAATGAAGACTGCCTTTACTTAAACATCTATGTGCCCATGGAAGATGGAACCAACATAAAGA 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGTTCAAGATCAAAATGAAGACTGCCTTTACTTAAACATCTATGTGCCCATGGAAGATGGAACCAACATAAAGA 666
Query 122 GAAATGCAGACGATATAACCAGTAATGACCATGGTGAAGATAAAGATATTCATGAACAGAACAGTAAGAAGCCT 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAAATGCAGACGATATAACCAGTAATGACCATGGTGAAGATAAAGATATTCATGAACAGAACAGTAAGAAGCCT 740
Query 196 GTTATGGTCTATATCCATGGGGGATCTTACATGGAGGGAACCGGTAACATGATTGATGGCAGCATTTTGGCCAG 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GTTATGGTCTATATCCATGGGGGATCTTACATGGAGGGAACCGGTAACATGATTGATGGCAGCATTTTGGCCAG 814
Query 270 CTATGGGAACGTCATCGTTATCACCATTAACTACCGTCTGGGAATACTAGGTAT-------------------- 323
|||||||||||||||||||||||||||||||||||||||||||||||||||..|
Sbjct 815 CTATGGGAACGTCATCGTTATCACCATTAACTACCGTCTGGGAATACTAGGGTTTTTAAGTACCGGTGACCAGG 888
Query 324 --GCAAGAGGCACGTTTGTG----TGGGAGCTCAAAAATGTTTAATTATT--------TT-----AAATCT--- 375
||||.|||||..|.||.| || |.|||.| ||.||..|.| || .|||.|
Sbjct 889 CAGCAAAAGGCAACTATGGGCTCCTG---GATCAGA----TTCAAGCACTGAGGTGGATTGAGGAGAATGTCGG 955
Query 376 --CCTTT--------CACTAATTTAATAAATTTTTTT------------------------------------- 402
||||| |.|.||...|.|.|.|.|.|||
Sbjct 956 AGCCTTTGGCGGGGACCCCAAGAGAGTGACTATCTTTGGCTCGGGGGCTGGGGCCTCCTGTGTCAGCCTGTTGA 1029
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1030 CCCTGTCCCACTACTCAGAAGGTCTCTTCCAGAAGGCCATCATTCAGAGCGGCACTGCCCTGTCCAGCTGGGCA 1103
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1104 GTGAACTACCAGCCGGCCAAGTACACTCGGATATTGGCAGACAAGGTCGGCTGCAACATGCTGGACACCACGGA 1177
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1178 CATGGTAGAATGTCTGAAGAACAAGAACTACAAGGAGCTCATCCAGCAGACCATCACCCCGGCCACCTACCACA 1251
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1252 TAGCCTTTGGGCCGGTGATCGACGGCGACGTCATCCCAGACGACCCCCAGATCCTGATGGAGCAAGGCGAGTTC 1325
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1326 CTCAACTACGACATCATGCTGGGCGTCAACCAAGGGGAAGGCCTGAAGTTCGTGGACGGCATCGTGGATAACGA 1399
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1400 GGACGGTGTGACGCCCAACGACTTTGACTTCTCCGTGTCCAACTTCGTGGACAACCTTTACGGCTACCCTGAAG 1473
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1474 GGAAAGACACTTTGCGGGAGACTATCAAGTTCATGTACACAGACTGGGCCGATAAGGAAAACCCGGAGACGCGG 1547
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1548 CGGAAAACCCTGGTGGCTCTCTTTACTGACCATCAGTGGGTGGCCCCCGCCGTGGCCACCGCCGACCTGCACGC 1621
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1622 GCAGTACGGCTCCCCCACCTACTTCTATGCCTTCTATCATCACTGCCAAAGCGAAATGAAGCCCAGCTGGGCAG 1695
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1696 ATTCGGCCCATGGCGATGAAGTCCCCTATGTCTTCGGCATCCCCATGATCGGTCCCACAGAGCTCTTCAGTTGT 1769
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1770 AATTTCTCCAAGAACGACGTCATGCTCAGTGCCGTGGTGATGACCTACTGGACGAACTTCGCCAAAACTGGTGA 1843
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1844 TCCAAACCAACCAGTTCCTCAGGATACCAAGTTCATTCATACAAAACCCAATCGCTTTGAAGAAGTGGCCTGGT 1917
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1918 CCAAGTATAATCCCAAAGACCAGCTCTATCTGCATATTGGCTTGAAACCCAGAGTGAGAGATCACTACCGGGCA 1991
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1992 ACGAAAGTGGCTTTCTGGTTGGAATTGGTTCCTCATTTGCACAACTTGAACGAGATATTCCAGTATGTTTCAAC 2065
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2066 AACCACAAAGGTTCCTCCACCAGACATGACATCATTTCCCTATGGCACCCGGCGATCTCCCGCCAAGATATGGC 2139
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2140 CAACCACCAAACGCCCAGCAATCACTCCTGCCAACAATCCCAAACACTCTAAGGACCCTCACAAAACAGGGCCC 2213
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2214 GAGGACACAACTGTCCTCATTGAAACCAAACGAGATTATTCCACCGAATTAAGTGTCACCATTGCCGTCGGGGC 2287
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2288 GTCGCTCCTCTTCCTCAACATCTTAGCCTTTGCGGCGCTGTACTACAAAAAGGACAAGAGGCGCCATGAGACTC 2361
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2362 ACAGGCACCCCAGTCCCCAGAGAAACACCACAAATGATATCACTCACATCCAGAACGAAGAGATCATGTCTCTG 2435
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2436 CAGATGAAGCAGCTGGAACACGATCACGAGTGTGAGTCGCTGCAGGCACACGACACGCTGAGGCTCACCTGCCC 2509
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2510 TCCAGACTACACCCTCACGCTGCGCCGGTCGCCGGATGACATCCCATTTATGACGCCAAACACCATCACCATGA 2583
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2584 TTCCAAACACATTGATGGGGATGCAGCCTTTACACACTTTTAAAACCTTCAGTGGAGGACAAAACAGTACAAAT 2657
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2658 TTACCCCACGGACATTCCACCACTAGAGTATAGCTTTTCCCTATTTCCCCTCCTATCCCTCTGCCCCTACTGCT 2731
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2732 CAGCAATGTAAAAGAGACAAATAAGGAGAAAGAAAATCTCCAAACCAGGAATGTTTTTGTGCCACTGACTTTAG 2805
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2806 ATAAAAATGCAAAAGGGCAGTCATCCTGTCCCAGCAGACCCTTCTCATTGGCATTTTCCAGTATTGTGAGATCA 2879
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2880 ATTTCTGACCATATGAAATGTGAAAAGTATATGTTTCTGTTACAATACTGCTTTAAGATCTAAACCATGCCAAC 2953
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2954 AGATGTTTCGTGTGACTAGGACATCACCATTTCAAGGAACTGTGTGTTTCCAACATCATGGTAGCAGCACACAC 3027
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3028 TTCCAAAGCTCAGCCAGGGACACTTAATATTTTTTAATTACAATGGAAATTTAAACATTTTTATGTGGGCTACA 3101
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3102 CAATGGATGGCTCTTCTTAAGTGAAGAAAGACTCTATAGGCTTTTACACAGCACATGAAGCAGTAATCCAGAAA 3175
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3176 GAAGGAAATGCAGAATTTTATTATCAAAGTAAGCGAATTGACTGTGCAGAAAAATTGTAGGGTTCTGTGGAAGG 3249
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3250 AGGTATTCTGCCAGCCTGAACTATATTTAAGAAACTTTGTAAAAAATAAAAATGTATATAGCTGTGAGCTCAAA 3323
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3324 CAAAAACTGCAGACAAACAAAAAAGAGAAAAGCTTTTATTTGTGTTTTCAGTTTGAAAGAACTTTTAGCAAGGT 3397
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3398 TGTGCTTTCAAACACATATTAGTCCTACCACCTTAGTTCCTCTACAGCAAAAGAGGCTTTTCTTCTTAATTACA 3471
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3472 TGTAAACAAAGACATGGGATTTTCTGACGTAAGATTTTCATTTGTAGGAATATGTGATGTCAAATGGAAGACTC 3545
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3546 AGAAGTTTTGTGTGGCCTATTTCTCCCTGTCAGGTTGCACAGATGCATGTAGAGCATTCTTAGGAGACCATTGT 3619
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3620 TTTAGAAAACTTTGATTTGTACATGTTAGTTTTCATGAAATTGCAACACAGAGATAGGTCCTAAAAGTGGAATG 3693
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3694 TATTTAAAACTTGTTGAATTAGACACACACACACAGACACACACAAAGAATCAGCAGAGAAAACAAAATACAAG 3767
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3768 TCCTGTTCTGTAGTTCTTGCCCTTTGAATATATTTGGGAAGAGTTGCTTCCTATTTCAGGACCCTGCCAAAAAA 3841
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3842 GAAGAAAGCTTGCCTTTGGTGGGGCTATGCCCCTTGGAGTAAATACAGCTCTGTGTTCCCTAGCAGCTGCCGGA 3915
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3916 GGATTTGGCTGATGAAGTACCTGCTCAGCTTAGCTAATCAGATTAAAGGAAGACATGTATGTCTTTTGTTTAAG 3989
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3990 CACCTAGTCCCTTATGTATCAGTAAACAGGTTTTTAAAAATCTTTTATGTCATTTATAGGATAAAACATATGCT 4063
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4064 TGTCTGAAAATATCACCTTTTGTGGATTTATCTGATCACCAAATAATAAATATTAAGAAGAATGGGGGAAAAAG 4137
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4138 GATAGAATATTAAAACTGCTTTGCATAGGTTTTTGGGGAAATTAGGATATCTTCACTGACAAGACACTGAATGG 4211
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4212 AATTTATTCACCCATTTTAAATTGGTTACTTGGGGATCAGAGATTTGTCTCTCCAACAGCTTGTGGTTTTCTTA 4285
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4286 TTACTCATTTTCAGGAAAGTTTGTAGTATTACAAGGCAGAAGGAAACACAGTAGCAATGGTTGCTCTATATTTT 4359
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4360 GTCTTTCAAAGATTACTGCATTACCAAGAAACAGTAGCCAAAGATGTTTGAAGATCATGTCCCTTAGCTGCATT 4433
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4434 GTGGGTTATTCTAGAAATCCAATGTTAAATGCCTCTACTAAAGTGGGGATTCCCCATAAAAATTGTCCAGCTAC 4507
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4508 CTGACTCTTTTGCAATAACAACTTTGATTACTGAATCCATACACTCAAACTATAGTGATATATCAGTGTTTGGG 4581
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4582 AGTGACCTCTAGAAAAAAGAAAACTGTTTTTAGAAATACATAAAATCACTTCCAAATCCTGTTGCTTATGTTGG 4655
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4656 GTTAAATTTGAAAGCAATTCTCTATATATAAATATGTGAAATATTATGATCTGAACTTAGCACACATGAAGCAA 4729
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4730 CATTTCTTTGCTACACAGAGGTGTCTTGGAAAGATTTCATTCCCAATTCATTTTTCATAGATCTATAATCAGGC 4803
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4804 AATTTCTGCAAGCAATGTATGACCCCACCTGAGCAACCACAAATAGGCTCTCCATGAAACTGCAAAGGAACTGA 4877
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4878 TGTGTGGCATCCATGCTGGTTTTGTCTGTCTATAATATGAATTCAAGTATCTGTTCATATTTCCAATTGTCTCC 4951
Query 403 -------------------------------------------------------------------------- 402
Sbjct 4952 TGCTAGCAATATGTGCCACAACATGACAGTCTTGTGACATCTTAAGGAAAAGAAGAGTTCCTGTTAAATGAATA 5025
Query 403 -------------------------------------------------------------------------- 402
Sbjct 5026 GCTTTAGCTTTTACAGGGGATTATGATTAAAAGTGATTTAGTACATCTTACATGATATCTCATTTCTACGTGAA 5099
Query 403 -------------------------------------------------------------------------- 402
Sbjct 5100 AAGAAGTTATAGAATCTTCATAGAGTTCCATGAGAAAAATATACTTGCTATTTATAGAAAACGAGAAAAAAGAA 5173
Query 403 -------------------------------------------------------------------------- 402
Sbjct 5174 AAAAATGAGAAACAAGTAAGAAAAAATCCTTTCCTAGGCTTTTCCTTGATCTTCAGAGGCACACAGGGTTTAAT 5247
Query 403 -------------------------------------------------------------------------- 402
Sbjct 5248 GGTTCCTTAGGTTATTATTTTGAGGTTTTGTTCTTTCTTTTGCCTTAAGTAATGACAGAAGATATATATGGCCA 5321
Query 403 -------------------------------------------------------------------------- 402
Sbjct 5322 GACACATATGTATAAACTTTTCAGCAGCATTTTAATAATAAAATATCACACTATTTTCTAATGCTTTGTACAAA 5395
Query 403 - 402
Sbjct 5396 C 5396
