Nucleotide Global Alignment

Description

Query:
TRCN0000472051
Subject:
XR_140685.5
Aligned Length:
1047
Identities:
564
Gaps:
420

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCGGAGAACTCTGCAAAACAAGAGGCTGGGGATTGCGTTAGCAAGAAACCAGTTCTCGCCGGAGCTTGGGGAAG  74

Query    1  --------------------------------------------------------------------ATGGGT  6
                                                                                ||||.|
Sbjct   75  GAAGTCTCTCTGCGGAGGTCTGAGGGAAGCAGCGCTCGCAGCAGGTAGACAGACGCCGAGCCATCATCATGGAT  148

Query    7  AAAGGAGACCCCAACAAGCCGCGGGGCAAAATGTCCTCGTA--CGCCTTCTTCGTGCAGACCTGCCGGGAAGAG  78
            ||.||.|||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||.||.|||
Sbjct  149  AAGGGTGACCCCAACAAGCCGCGGGGCAAAATGTCCTCGTACGCGCCTTCTTCGTGCAGACCTGCCGCGAGGAG  222

Query   79  CACAAGAAGAAACACCCGGACTCTTCCGTCAATTTCGCGGAATTCTCCAAGAAGTGTTCGGAGAGATGGAAGAC  152
            |||||||||||.||.||.|||||.||.||.||.|||||.||.|||||||||||.||.||.||||||||||||||
Sbjct  223  CACAAGAAGAAGCATCCCGACTCGTCGGTGAACTTCGCTGAGTTCTCCAAGAAATGCTCCGAGAGATGGAAGAC  296

Query  153  CATGTCTGCAAAGGAGAAGTCGAAGTTTGAAGATATGGCAAAAAGTGACAAAGCTCGCTATGACAGGGAGATGA  226
            |||||||.|||||||.|||||.||||||||||||.||||.||.||.|||||||||||.||||||||||||||||
Sbjct  297  CATGTCTTCAAAGGAAAAGTCCAAGTTTGAAGATTTGGCCAAGAGCGACAAAGCTCGTTATGACAGGGAGATGA  370

Query  227  AAAATTACGTTCCTCCCAAAGGTGATAAGAAGGGGAAGAAAAAGGACCCCAATGCTCCTAAAAGGCCACCATCT  300
            |.||.||.||||||||||||||.||||||||.||.||||||||.||||||||||||||.||.||.|||||.|||
Sbjct  371  AGAACTATGTTCCTCCCAAAGGGGATAAGAAAGGAAAGAAAAAAGACCCCAATGCTCCGAAGAGACCACCGTCT  444

Query  301  GCCTTCTTCCTGTTTTGCTCTGAACATCGCCCAAAGATCAAAAGTGAACACCCTGGCCTATCCATTGGGGATAC  374
            ||||||||||||||||||||||||.||||||||||||||||||.|||||||||.|||||.||.|||||.|||||
Sbjct  445  GCCTTCTTCCTGTTTTGCTCTGAAAATCGCCCAAAGATCAAAATTGAACACCCAGGCCTGTCTATTGGAGATAC  518

Query  375  TGCAAAGAAATTGGGTGAAATGTGGTCTGAGCAGTCAGCCAAAGATAAACAACCATATGAACAGAAAGCAGCTA  448
            |||.||||||.|||||||.||||||||||||||.||.|||||||||||||||||.|||||.|||||||.|||||
Sbjct  519  TGCGAAGAAACTGGGTGAGATGTGGTCTGAGCAATCTGCCAAAGATAAACAACCGTATGAGCAGAAAGTAGCTA  592

Query  449  AGCTAAAGGAGAAATATGAAAAGGATATTGCTGCATATCGTGCCAAGGGCAAAAGTGAAGCAGGAAAGAAGGGC  522
            |.|||||||||||.|||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.
Sbjct  593  AACTAAAGGAGAAGTATGAAAAGGATATTGCTGCATACCGTGCCAAGGGCAAAAGTGAAGCAGGAAAGAAGGGT  666

Query  523  CCTGGCAGGCCAACAGGCTCAAAGAAGAAGAACGAACCAGAAGATGAGGAGGAG---GAGGAGGAAGAAGAAGA  593
            |||||.||||||||||||||||||||||||||||||||||||||||||||||||   ||.|||||.|||||.||
Sbjct  667  CCTGGTAGGCCAACAGGCTCAAAGAAGAAGAACGAACCAGAAGATGAGGAGGAGGAAGAAGAGGAGGAAGAGGA  740

Query  594  TGAAGATGAGGAGGAAGAGGATGAAGATGAAGAA----------------------------------------  627
            .||||||||.||||||||.||.||.|||||||||                                        
Sbjct  741  GGAAGATGAAGAGGAAGAAGAGGAGGATGAAGAATAAGTGGCTGTCCTAAAGTGTGGAGTATATTTGCTCAGGC  814

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct  815  AATTATTTTGCTAAGAATGTGAAATTCAAGTGCAGCTCAACATTAGCTTCAGTATAAAAACTGTACAGATTTTT  888

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct  889  GTATAGCTGATGAGATTCTTTGTAGAGAAAATACTTTTTAAGAAGAGTTTGTAGCTTTTTCAGGGGCTACAACT  962

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct  963  ACAGTTAGATTTAAAGCTTTTGATGTTGAATGTTTCTAAATATTTAATGGCTTTTTTAATTTCTTATGCTAGCA  1036

Query  628  -----------  627
                       
Sbjct 1037  AAAAAAAAAAA  1047