Nucleotide Global Alignment
Description
- Query:
- TRCN0000472060
- Subject:
- XM_006716536.3
- Aligned Length:
- 3044
- Identities:
- 981
- Gaps:
- 2053
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGACAGGTGTCGCAGCCAGATCGCCCTCATATCCGAGGTTCAACATGTCTATCCAGGGAACCTTGCTCTCCGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGTCTTCTCCTCTGGCCACACTCCGCCCTGGCCCGCTCCGCCCCGCCCGCGGGAAAAAGGTCGCGTAGCGATGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGTCGTGGGGGCCTGGCCGGCCGTCGCGGACTCGGGAGATGGAGGAAAAGGAGATATTACGGCGGCAGATCCGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTACTGCAGGGTCTGATTGATGACTACAAAACCCTCCACGGCAATGCCCCGGCCCCTGGTACCCCAGCAGCTTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGGTGGCAGCCACCCACTTACCACAGTGGCAGAGCCTTTAGTGCCCGCTACCCTCGTCCAAGCCGGAGGGGCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACTCTTCCCACCATGGGCCTTCGTGGCGCAAGAAATACTCCCTCGTGAATCGGCCCCCGGGACCCTCAGACCCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCTGCCGACCATGCTGTGCGGCCGTTGCACGGGGCCCGGGGGGGCCAGCCTCCTGTCCCGCAGCAGCATGTCCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGAGAGACAGGTCCAGCTCAGTCAGGGTCAGAACGTGGTCATCAAAGTTAAACCGCCATCAAAGTCTGGCTCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCAGTGCCTCAGGGGCCCAGCGGGGCTCTTTGGAAGAATTTGAGGAAACCCCCTGGAGTGACCAAAGGCCCCGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAAGGTGAAGGTGAGCCCCCTCGGGGACAGCTGCAGCCCTCGAGGCCAACAAGAGCCAGGGGGACCTGCAGTGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGAAGATCCTCTTCTGGTCTGCCAGAAGGAGCCTGGTAAGCCCAGGATGGTGAAGTCAGTGGGCAGTGTGGGCG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACAGCCCCCGGGAGCCCCGCCGGACAGTCAGTGAGAGTGTGATTGCCGTCAAGGCGAGCTTCCCATCCTCCGCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGCCCCCACGCACTGGCGTGGCCCTGGGCCGGAAGCTGGGTTCTCATTCCGTGGCCAGCTGTGCTCCACAGCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCTTGGGGACAGGAGAGTAGATGCTGGCCACACAGATCAGCCAGTTCCGTCTGGCTCAGTGGGGGGCCCCGCCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GACCGGCCTCAGGACCCAGGCAGGCCCGGGAGGCCTCGCTGGTTGTGACCTGTCGAACTAACAAGTTCCGGAAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AACAACTACAAATGGGTGGCTGCCTCCTCGAAGAGTCCCCGGGTTGCTCGGAGGGCCCTCAGTCCCAGAGTGGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGCAGAGAATGTGTGCAAGGCCTCTGCTGGCATGGCAAACAAGGTGGAGAAGCCGCAGCTCATAGCTGACCCAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGCCCAAGCCCAGGAAGCCAGCCACGTCCTCCAAGCCAGGGTCTGCCCCCAGCAAGTACAAGTGGAAGGCCTCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGCCCCTCTGCCTCCTCCTCTTCCTCCTTCCGTTGGCAGTCGGAGGCCAGCAGCAAGGACCATGCCTCCCAGCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTCCCCAGTCCTGTCTAGGTCCCCGTCGGGGGACAGACCAGCAGTAGGACACAGTGGCTTGAAGCCCCTCTCTG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGGAGACCCCGCTCTCGGCTTACAAAGTGAAGAGCCGCACCAAGATCATCCGGAGACGCAGCAGCACAAGCCTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCTGGAGACAAGAAAAGCGGCACCTCACCTGCCGCCACCGCCAAGAGCCACCTCAGCCTCCGGCGGAGACAGGC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCTCAGGGGGAAGAGCAGCCCTGTCCTGAAGAAGACCCCCAACAAGGGCCTGGTACAGGTCACCACGCACCGAC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TATGTCGCCTGCCACCGAGCCGGGCCCACCTCCCCACCAAGGAAGCGTCCAGCCTGCATGCCGTGCGGACTGCA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CCCACCAGCAAGGTGATCAAGACCCGCTACCGCATTGTCAAGAAGACGCCGGCCTCGCCTCTCAGCGCCCCGCC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTTCCCCCTGTCTCTGCCCTCCTGGCGGGCCCGGCGGCTCTCACTATCCAGGTCCCTGGTGCTGAACCGCCTGC 1924
Query 1 -----------------------------------------------------------------------AT- 2
||
Sbjct 1925 GTCCAGTTGCCAGCGGGGGTGGGAAAGCCCAACCGGGCTCCCCTTGGTGGCGGAGCAAAGGCTACCGCTGCATC 1998
Query 3 GGAG---------------------------------CCAGGA-----GGAGAGCCCACAGGTGCTAAAGAG-A 37
|||| |||.|| ||..||||||..|.||| |.| |
Sbjct 1999 GGAGGGGTCCTCTACAAAGTATCTGCCAACAAGCTCTCCAAGACCTCCGGCCAGCCCAGTGATGC----GGGCA 2068
Query 38 GCAGTACCCTGATGGAGTCCCTTG----CAGGCCGGCTGGATCCTGCAGGCAGCTGTAGCCGTTCCCTGGCCAG 107
||||..|||| |.|| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2069 GCAGGCCCCT----------CCTGCGCACAGGCCGGCTGGATCCTGCAGGCAGCTGTAGCCGTTCCCTGGCCAG 2132
Query 108 CCGGGCAGTGCAGCGCAGCCTGGCCATCATCCGGCAGGCGCGGCAGCGCAGGGAGAAGAGGAAGGAGTACTGCA 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2133 CCGGGCAGTGCAGCGCAGCCTGGCCATCATCCGGCAGGCGCGGCAGCGCAGGGAGAAGAGGAAGGAGTACTGCA 2206
Query 182 TGTACTACAACCGCTTCGGCAGGTGCAACCGTGGCGAGCGCTGCCCCTACATCCACGATCCCGAGAAGGTGGCC 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2207 TGTACTACAACCGCTTCGGCAGGTGCAACCGTGGCGAGCGCTGCCCCTACATCCACGATCCCGAGAAGGTGGCC 2280
Query 256 GTGTGCACCAGGTTTGTCCGGGGCACCTGCAAGAAAACGGATGGGACCTGCCCCTTCTCCCACCATGTGTCCAA 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2281 GTGTGCACCAGGTTTGTCCGGGGCACCTGCAAGAAAACGGATGGGACCTGCCCCTTCTCCCACCATGTGTCCAA 2354
Query 330 GGAGAAGATGCCGGTGTGCTCCTACTTCCTGAAGGGCATCTGCAGCAACAGCAACTGTCCCTATAGCCACGTGT 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2355 GGAGAAGATGCCGGTGTGCTCCTACTTCCTGAAGGGCATCTGCAGCAACAGCAACTGTCCCTATAGCCACGTGT 2428
Query 404 ACGTGTCCCGCAAGGCCGAGGTCTGCAGCGACTTCCTCAAAGGCTACTGCCCCCTGGGTGCAAAGTGCAAGAAG 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2429 ACGTGTCCCGCAAGGCCGAGGTCTGCAGCGACTTCCTCAAAGGCTACTGCCCCCTGGGTGCAAAGTGCAAGAAG 2502
Query 478 AAACACACGCTGCTGTGCCCCGACTTTGCCCGCAGGGGGGCGTGTCCCCGCGGCGCCCAGTGCCAGCTGCTCCA 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2503 AAACACACGCTGCTGTGCCCCGACTTTGCCCGCAGGGGGGCGTGTCCCCGCGGCGCCCAGTGCCAGCTGCTCCA 2576
Query 552 CCGTACCCAGAAACGCCACAGTCGGCGGGCAGCCACGTCCCCCGCCCCAGGGCCCAGCGACGCAACCGCCAGGA 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2577 CCGTACCCAGAAACGCCACAGTCGGCGGGCAGCCACGTCCCCCGCCCCAGGGCCCAGCGACGCAACCGCCAGGA 2650
Query 626 GCAGGGTCTCGGCCAGCCACGGGCCCAGGAAGCCTTCAGCATCCCAGCGCCCCACCAGGCAGACGCCCAGCTCG 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2651 GCAGGGTCTCGGCCAGCCACGGGCCCAGGAAGCCTTCAGCATCCCAGCGCCCCACCAGGCAGACGCCCAGCTCG 2724
Query 700 GCTGCCCTCACTGCGGCTGCCGTGGCTGCACCTCCCCACTGCCCAGGGGGGTCAGCCTCTCCCTCATCCTCGAA 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2725 GCTGCCCTCACTGCGGCTGCCGTGGCTGCACCTCCCCACTGCCCAGGGGGGTCAGCCTCTCCCTCATCCTCGAA 2798
Query 774 GGCTTCCTCCTCCTCCTCCTCCTCCTCATCCCCTCCCGCTTCCTTGGACCACGAGGCACCATCTCTCCAGGAGG 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2799 GGCTTCCTCCTCCTCCTCCTCCTCCTCATCCCCTCCCGCTTCCTTGGACCACGAGGCACCATCTCTCCAGGAGG 2872
Query 848 CTGCCTTAGCAGCAGCGTGCTCCAACAGGCTCTGCAAGCTGCCTTCCTTCATCTCCCTGCAGTCCTCGCCGAGC 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2873 CTGCCTTAGCAGCAGCGTGCTCCAACAGGCTCTGCAAGCTGCCTTCCTTCATCTCCCTGCAGTCCTCGCCGAGC 2946
Query 922 CCAGGAGCCCAGCCCAGGGTCCGGGCCCCTAGGGCCCCCCTCACCAAGGACTCAGGGAAGCCTCTGCACATCAA 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2947 CCAGGAGCCCAGCCCAGGGTCCGGGCCCCTAGGGCCCCCCTCACCAAGGACTCAGGGAAGCCTCTGCACATCAA 3020
Query 996 ACCACGTCTG 1005
||||||||||
Sbjct 3021 ACCACGTCTG 3030
