Nucleotide Global Alignment
Description
- Query:
- TRCN0000472060
- Subject:
- XM_011516943.2
- Aligned Length:
- 2907
- Identities:
- 459
- Gaps:
- 2433
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGACGTCGTGGGGGCCTGGCCGGCCGTCGCGGACTCGGGAGATGGAGGAAAAGGAGATATTACGGCGGCAGAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGCCTACTGCAGGGTCTGATTGATGACTACAAAACCCTCCACGGCAATGCCCCGGCCCCTGGTACCCCAGCAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTTCTGGGTGGCAGCCACCCACTTACCACAGTGGCAGAGCCTTTAGTGCCCGCTACCCTCGTCCAAGCCGGAGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCTACTCTTCCCACCATGGGCCTTCGTGGCGCAAGAAATACTCCCTCGTGAATCGGCCCCCGGGACCCTCAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCTCCTGCCGACCATGCTGTGCGGCCGTTGCACGGGGCCCGGGGGGGCCAGCCTCCTGTCCCGCAGCAGCATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCTTGAGAGACAGGTCCAGCTCAGTCAGGGTCAGAACGTGGTCATCAAAGTTAAACCGCCATCAAAGTCTGGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCTGCCAGTGCCTCAGGGGCCCAGCGGGGCTCTTTGGAAGAATTTGAGGAAACCCCCTGGAGTGACCAAAGGCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCGGGAAGGTGAAGGTGAGCCCCCTCGGGGACAGCTGCAGCCCTCGAGGCCAACAAGAGCCAGGGGGACCTGCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGTGGAAGATCCTCTTCTGGTCTGCCAGAAGGAGCCTGGTAAGCCCAGGATGGTGAAGTCAGTGGGCAGTGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGCGACAGCCCCCGGGAGCCCCGCCGGACAGTCAGTGAGAGTGTGATTGCCGTCAAGGCGAGCTTCCCATCCTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CGCTCTGCCCCCACGCACTGGCGTGGCCCTGGGCCGGAAGCTGGGTTCTCATTCCGTGGCCAGCTGTGCTCCAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGCTCCTTGGGGACAGGAGAGTAGATGCTGGCCACACAGATCAGCCAGTTCCGTCTGGCTCAGTGGGGGGCCCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCCAGACCGGCCTCAGGACCCAGGCAGGCCCGGGAGGCCTCGCTGGTTGTGACCTGTCGAACTAACAAGTTCCG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAAAAACAACTACAAATGGGTGGCTGCCTCCTCGAAGAGTCCCCGGGTTGCTCGGAGGGCCCTCAGTCCCAGAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGGCTGCAGAGAATGTGTGCAAGGCCTCTGCTGGCATGGCAAACAAGGTGGAGAAGCCGCAGCTCATAGCTGAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCAGAGCCCAAGCCCAGGAAGCCAGCCACGTCCTCCAAGCCAGGGTCTGCCCCCAGCAAGTACAAGTGGAAGGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTCCAGCCCCTCTGCCTCCTCCTCTTCCTCCTTCCGTTGGCAGTCGGAGGCCAGCAGCAAGGACCATGCCTCCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGCTCTCCCCAGTCCTGTCTAGGTCCCCGTCGGGGGACAGACCAGCAGTAGGACACAGTGGCTTGAAGCCCCTC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCTGGGGAGACCCCGCTCTCGGCTTACAAAGTGAAGAGCCGCACCAAGATCATCCGGAGACGCAGCAGCACAAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCTTCCTGGAGACAAGAAAAGCGGCACCTCACCTGCCGCCACCGCCAAGAGCCACCTCAGCCTCCGGCGGAGAC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGGCCCTCAGGGGGAAGAGCAGCCCTGTCCTGAAGAAGACCCCCAACAAGGGCCTGGTACAGGTCACCACGCAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CGACTATGTCGCCTGCCACCGAGCCGGGCCCACCTCCCCACCAAGGAAGCGTCCAGCCTGCATGCCGTGCGGAC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGCACCCACCAGCAAGGTGATCAAGACCCGCTACCGCATTGTCAAGAAGACGCCGGCCTCGCCTCTCAGCGCCC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CGCCCTTCCCCCTGTCTCTGCCCTCCTGGCGGGCCCGGCGGCTCTCACTATCCAGGTCCCTGGTGCTGAACCGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTGCGTCCAGTTGCCAGCGGGGGTGGGAAAGCCCAACCGGGCTCCCCTTGGTGGCGGAGCAAAGGCTACCGCTG 1850
Query 1 -AT-GGAG---------------------------------CCAGGA-----GGAGAGCCCACAGGTGCTAAAG 34
|| |||| |||.|| ||..||||||..|.||| |
Sbjct 1851 CATCGGAGGGGTCCTCTACAAAGTATCTGCCAACAAGCTCTCCAAGACCTCCGGCCAGCCCAGTGATGC----G 1920
Query 35 AG-AGCAGTACCCTGATGGAGTCCCTTG----CAGGCCGGCTGGATCCTGCAGGCAGCTGTAGCCGTTCCCTGG 103
.| |||||..|||| |.|| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1921 GGCAGCAGGCCCCT----------CCTGCGCACAGGCCGGCTGGATCCTGCAGGCAGCTGTAGCCGTTCCCTGG 1984
Query 104 CCAGCCGGGCAGTGCAGCGCAGCCTGGCCATCATCCGGCAGGCGCGGCAGCGCAGGGAGAAGAGGAAGGAGTAC 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1985 CCAGCCGGGCAGTGCAGCGCAGCCTGGCCATCATCCGGCAGGCGCGGCAGCGCAGGGAGAAGAGGAAGGAGTAC 2058
Query 178 TGCATGTACTACAACCGCTTCGGCAGGTGCAACCGTGGCGAGCGCTGCCCCTACATCCACGATCCCGAGAAGGT 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2059 TGCATGTACTACAACCGCTTCGGCAGGTGCAACCGTGGCGAGCGCTGCCCCTACATCCACGATCCCGAGAAGGT 2132
Query 252 GGCCGTGTGCACCAGGTTTGTCCGGGGCACCTGCAAGAAAACGGATGGGACCTGCCCCTTCTCCCACCATGTGT 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2133 GGCCGTGTGCACCAGGTTTGTCCGGGGCACCTGCAAGAAAACGGATGGGACCTGCCCCTTCTCCCACCATGTGT 2206
Query 326 CCAAGGAGAAGATGCCGGTGTGCTCCTACTTCCTGAAGGGCATCTGCAGCAACAGCAACTGTCCCTATAGCCAC 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2207 CCAAGGAGAAGATGCCGGTGTGCTCCTACTTCCTGAAGGGCATCTGCAGCAACAGCAACTGTCCCTATAGCCAC 2280
Query 400 GTGTACGTGTCCCGCAAGGCCGAGGTCTGCAGCGACTTCCTCAAAGGCTACTGCCCCCTGGGTGCAAAG----- 468
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2281 GTGTACGTGTCCCGCAAGGCCGAGGTCTGCAGCGACTTCCTCAAAGGCTACTGCCCCCTGGGTGCAAAGCCCCC 2354
Query 469 TGCAAGAAGAAACACACG--CTGCTGTGCCCCGACTTTGCCCGCAGGGGGGCGTGTCCCCGCGGCGCCCAGTGC 540
| |.|.|| |||||..|||.||
Sbjct 2355 T-----------CTCTCGACCTGCTCAGCCGCG----------------------------------------- 2376
Query 541 CAGCTGCTCCACCGTACCCAGAAACGCCACAGTCGGCGGGCAGCCACGTCCCCCGCCCCAGGGCCCAGCGACGC 614
Sbjct 2377 -------------------------------------------------------------------------- 2376
Query 615 AACCGCCAGGAGCAGGGTCTCGGCCAGCCACGGGCCCAGGAAGCCTTCAGCATCCCAGCGCCCCACCAGGCAGA 688
Sbjct 2377 -------------------------------------------------------------------------- 2376
Query 689 CGCCCAGCTCGGCTGCCCTCACTGCGGCTGCCGTGGCTGCACCTCCCCACTGCCCAGGGGGGTCAGCCTCTCCC 762
Sbjct 2377 -------------------------------------------------------------------------- 2376
Query 763 TCATCCTCGAAGGCTTCCTCCTCCTCCTCCTCCTCCTCATCCCCTCCCGCTTCCTTGGACCACGAGGCACCATC 836
Sbjct 2377 -------------------------------------------------------------------------- 2376
Query 837 TCTCCAGGAGGCTGCCTTAGCAGCAGCGTGCTCCAACAGGCTCTGCAAGCTGCCTTCCTTCATCTCCCTGCAGT 910
Sbjct 2377 -------------------------------------------------------------------------- 2376
Query 911 CCTCGCCGAGCCCAGGAGCCCAGCCCAGGGTCCGGGCCCCTAGGGCCCCCCTCACCAAGGACTCAGGGAAGCCT 984
Sbjct 2377 -------------------------------------------------------------------------- 2376
Query 985 CTGCACATCAAACCACGTCTG 1005
Sbjct 2377 --------------------- 2376
